Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DDB0231576
(58 letters)
Database: /home/dicty1/resource/WorkingDBs//nr-clean
2,329,665 sequences; 788,375,511 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|49653405|emb|CAG85767.1| unnamed protein product [Debaryomyce... 40 0.011
gi|57225653|gb|AAW42114.1| cation transport-related protein, put... 39 0.026
gi|42547222|gb|EAA70065.1| hypothetical protein FG10222.1 [Gibbe... 38 0.057
gi|28950109|emb|CAD70889.1| probable RIC1 protein [Neurospora cr... 37 0.13
gi|12311755|emb|CAC22612.1| SPBC713.11c [Schizosaccharomyces pom... 36 0.22
gi|56412213|gb|AAV88601.1| low temperature and salt responsive p... 35 0.63
>gi|49653405|emb|CAG85767.1| unnamed protein product [Debaryomyces
hansenii CBS767]
ref|XP_457739.1| unnamed protein product [Debaryomyces hansenii]
Length = 57
Score = 40.4 bits (93), Expect = 0.011
Identities = 20/47 (42%), Positives = 25/47 (52%)
Query: 11 IILCIIIPPLAVFIRRGCAXXXXXXXXXXXXXXXXXXXHALWVILKH 57
II+ II+PPL VF+ RGCA HAL+VILK+
Sbjct: 11 IIIAIILPPLGVFLERGCASSFWINIVLTILGYIPGIIHALYVILKY 57
>gi|57225653|gb|AAW42114.1| cation transport-related protein,
putative [Cryptococcus neoformans var. neoformans
JEC21]
ref|XP_569421.1| cation transport-related protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 57
Score = 39.3 bits (90), Expect = 0.026
Identities = 19/47 (40%), Positives = 24/47 (50%)
Query: 11 IILCIIIPPLAVFIRRGCAXXXXXXXXXXXXXXXXXXXHALWVILKH 57
IIL II+PPL VF+ RGC HAL++ILK+
Sbjct: 11 IILAIILPPLGVFLERGCGADLLINILLTILGYIPGIIHALYIILKY 57
>gi|42547222|gb|EAA70065.1| hypothetical protein FG10222.1
[Gibberella zeae PH-1]
ref|XP_390398.1| hypothetical protein FG10222.1 [Gibberella zeae PH-1]
Length = 67
Score = 38.1 bits (87), Expect = 0.057
Identities = 18/47 (38%), Positives = 24/47 (50%)
Query: 11 IILCIIIPPLAVFIRRGCAXXXXXXXXXXXXXXXXXXXHALWVILKH 57
IIL II+PP+ VF+ RGC HAL++ILK+
Sbjct: 21 IILAIILPPVGVFLERGCGADFFINILLTILGYIPGIIHALYIILKY 67
>gi|28950109|emb|CAD70889.1| probable RIC1 protein [Neurospora
crassa]
ref|XP_326946.1| hypothetical protein [Neurospora crassa]
gb|EAA31469.1| hypothetical protein [Neurospora crassa]
Length = 57
Score = 37.0 bits (84), Expect = 0.13
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 11 IILCIIIPPLAVFIRRGCAXXXXXXXXXXXXXXXXXXXHALWVILKH 57
II+ +I+PPL VF RGC HAL++ILK+
Sbjct: 11 IIVAVILPPLGVFFERGCGADLFINILLTILGYLPGIVHALYIILKY 57
>gi|12311755|emb|CAC22612.1| SPBC713.11c [Schizosaccharomyces
pombe]
ref|NP_595350.1| UPF0057 family protein; possible stress response protein
[Schizosaccharomyces pombe]
Length = 50
Score = 36.2 bits (82), Expect = 0.22
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 11 IILCIIIPPLAVFIRRGCAXXXXXXXXXXXXXXXXXXXHALWVILKH 57
+I II+PPL VF+ RGC HAL++ILK+
Sbjct: 4 VIFAIILPPLGVFLERGCGADVIINILLCCLGYVPGIIHALYIILKY 50
>gi|56412213|gb|AAV88601.1| low temperature and salt responsive
protein [Pennisetum glaucum]
Length = 56
Score = 34.7 bits (78), Expect = 0.63
Identities = 19/56 (33%), Positives = 25/56 (43%)
Query: 1 MSEGSRQVGMIILCIIIPPLAVFIRRGCAXXXXXXXXXXXXXXXXXXXHALWVILK 56
MS+G+ IIL II+PPL VF + GC +A+W I K
Sbjct: 1 MSDGTANCIDIILAIILPPLGVFFKFGCGVEFWICLVLTFFGYLPGIIYAVWAITK 56
Database: /home/dicty1/resource/WorkingDBs//nr-clean
Posted date: Mar 10, 2005 12:10 PM
Number of letters in database: 788,375,511
Number of sequences in database: 2,329,665
Lambda K H
0.336 0.148 0.492
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,528,990
Number of Sequences: 2329665
Number of extensions: 782658
Number of successful extensions: 1871
Number of sequences better than 1.0: 6
Number of HSP's better than 1.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1871
Number of HSP's gapped (non-prelim): 6
length of query: 58
length of database: 788,375,511
effective HSP length: 34
effective length of query: 24
effective length of database: 709,166,901
effective search space: 17020005624
effective search space used: 17020005624
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.7 bits)
S2: 77 (34.3 bits)
BLASTP 2.2.1 [Jul-12-2001]