Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DDB0230169
(249 letters)
Database: /home/dicty1/resource/WorkingDBs//nr-clean
2,329,665 sequences; 788,375,511 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|29610317|dbj|BAC74364.1| putative uridine phosphorylase [Stre... 152 6e-36
gi|32035117|ref|ZP_00135169.1| COG2820: Uridine phosphorylase [A... 122 6e-27
gi|1573245|gb|AAC21943.1| uridine phosphorylase (udp) [Haemophil... 121 1e-26
gi|30995365|ref|NP_438448.2| uridine phosphorylase [Haemophilus ... 121 1e-26
gi|42629743|ref|ZP_00155288.1| COG2820: Uridine phosphorylase [H... 121 1e-26
gi|42630579|ref|ZP_00156118.1| COG2820: Uridine phosphorylase [H... 120 2e-26
gi|52426373|ref|YP_089510.1| Udp protein [Mannheimia succinicipr... 119 9e-26
gi|48868641|ref|ZP_00321950.1| COG2820: Uridine phosphorylase [H... 119 9e-26
gi|18313830|ref|NP_560497.1| uridine phosphorylase [Pyrobaculum ... 117 3e-25
gi|51893293|ref|YP_075984.1| uridine phosphorylase [Symbiobacter... 114 2e-24
gi|19746796|ref|NP_607932.1| putative uridine phosphorylase [Str... 114 2e-24
gi|56807963|ref|ZP_00365778.1| COG2820: Uridine phosphorylase [S... 112 7e-24
gi|50914945|ref|YP_060917.1| Uridine phosphorylase [Streptococcu... 112 7e-24
gi|18144045|dbj|BAB80093.1| probable uridine phosphorylase [Clos... 112 7e-24
gi|29143708|ref|NP_807050.1| probable uridine phosphorylase [Sal... 111 2e-23
gi|14601845|ref|NP_148386.1| uridine phosphorylase [Aeropyrum pe... 109 6e-23
gi|55232694|gb|AAV48113.1| uridine phosphorylase [Haloarcula mar... 109 7e-23
gi|3323355|gb|AAC65977.1| uridine phosphorylase (udp) [Treponema... 108 1e-22
gi|46199372|ref|YP_005039.1| purine nucleoside phosphorylase [Th... 108 1e-22
gi|12518708|gb|AAG59027.1| uridine phosphorylase [Escherichia co... 108 1e-22
gi|53692531|ref|ZP_00122931.2| COG2820: Uridine phosphorylase [H... 108 1e-22
gi|43242|emb|CAA33724.1| unnamed protein product [Escherichia co... 107 2e-22
gi|56480449|ref|NP_709637.2| uridine phosphorylase [Shigella fle... 107 2e-22
gi|32030781|ref|ZP_00133549.1| COG2820: Uridine phosphorylase [H... 106 6e-22
gi|46106655|ref|ZP_00187586.2| COG0813: Purine-nucleoside phosph... 105 1e-21
gi|57159738|dbj|BAD85668.1| uridine phosphorylase [Thermococcus ... 105 1e-21
gi|15603437|ref|NP_246511.1| Udp [Pasteurella multocida subsp. m... 104 2e-21
gi|2181932|emb|CAA73838.1| uridine phosphorylase [Klebsiella aer... 104 2e-21
gi|56415822|ref|YP_152897.1| uridine phosphorylase [Salmonella e... 104 2e-21
gi|24375779|ref|NP_719822.1| uridine phosphorylase, putative [Sh... 103 3e-21
gi|21730872|pdb|1LX7|B Chain B, Structure Of E. Coli Uridine Pho... 103 3e-21
gi|2168160|emb|CAA73795.1| uridine phosphorylase [Salmonella typ... 103 4e-21
gi|26250592|ref|NP_756632.1| Uridine phosphorylase [Escherichia ... 102 1e-20
gi|56525321|emb|CAH75280.1| uridine phosphorylase, putative [Pla... 102 1e-20
gi|54308414|ref|YP_129434.1| Putative uridine phosphorylase [Pho... 101 2e-20
gi|51594605|ref|YP_068796.1| uridine phosphorylase [Yersinia pse... 101 2e-20
gi|45443015|ref|NP_994554.1| uridine phosphorylase [Yersinia pes... 101 2e-20
gi|15790752|ref|NP_280576.1| Udp1 [Halobacterium salinarum NRC-1... 101 2e-20
gi|37528245|ref|NP_931590.1| uridine phosphorylase (UDRPase) [Ph... 101 2e-20
gi|23479778|gb|EAA16513.1| purine nucleoside phosphorylase [Plas... 101 2e-20
gi|33520060|ref|NP_878892.1| uridine phosphorylase [Candidatus B... 100 3e-20
gi|27361545|gb|AAO10453.1| Uridine phosphorylase [Vibrio vulnifi... 100 3e-20
gi|50119145|ref|YP_048312.1| uridine phosphorylase [Erwinia caro... 100 4e-20
gi|37680561|ref|NP_935170.1| uridine phosphorylase [Vibrio vulni... 100 4e-20
gi|28897734|ref|NP_797339.1| uridine phosphorylase [Vibrio parah... 99 8e-20
gi|9655498|gb|AAF94193.1| uridine phosphorylase [Vibrio cholerae... 99 1e-19
gi|8670903|emb|CAB94933.1| uridine phosphorylase [Vibrio cholerae] 99 1e-19
gi|59712128|ref|YP_204904.1| uridine phosphorylase [Vibrio fisch... 99 1e-19
gi|55230061|gb|AAV45480.1| uridine phosphorylase [Haloarcula mar... 98 2e-19
gi|23613155|ref|NP_703477.1| uridine phosphorylase, putative [Pl... 97 3e-19
gi|28900934|ref|NP_800589.1| uridine phosphorylase [Vibrio parah... 97 3e-19
gi|47168599|pdb|1Q1G|F Chain F, Crystal Structure Of Plasmodium ... 97 3e-19
gi|59713713|ref|YP_206488.1| uridine phosphorylase [Vibrio fisch... 97 4e-19
gi|56500828|emb|CAH99775.1| uridine phosphorylase, putative [Pla... 96 8e-19
gi|9657521|gb|AAF96047.1| uridine phosphorylase [Vibrio cholerae... 96 1e-18
gi|24375619|ref|NP_719662.1| uridine phosphorylase [Shewanella o... 95 1e-18
gi|15672821|ref|NP_266995.1| uridine phosphorylase [Lactococcus ... 95 1e-18
gi|27359313|gb|AAO08257.1| Uridine phosphorylase [Vibrio vulnifi... 95 2e-18
gi|56415771|ref|YP_152846.1| probable uridine phosphorylase [Sal... 95 2e-18
gi|15790029|ref|NP_279853.1| Udp2 [Halobacterium salinarum NRC-1... 94 3e-18
gi|47169189|pdb|1SQ6|A Chain A, Plasmodium Falciparum Homolog Of... 93 5e-18
gi|56708383|ref|YP_170279.1| uridine phosphorylase [Francisella ... 92 9e-18
gi|54113565|gb|AAV29416.1| NT02FT0422 [synthetic construct] 92 9e-18
gi|37675871|ref|NP_936267.1| uridine phosphorylase [Vibrio vulni... 92 1e-17
gi|23126846|ref|ZP_00108730.1| COG2820: Uridine phosphorylase [N... 91 3e-17
gi|34105004|gb|AAQ61360.1| purine nucleoside phosphorylase [Chro... 89 8e-17
gi|24371692|ref|NP_715734.1| purine nucleoside phosphorylase [Sh... 89 1e-16
gi|54308624|ref|YP_129644.1| putative uridine phosphorylase [Pho... 88 2e-16
gi|15921217|ref|NP_376886.1| hypothetical 5'-methylthioadenosine... 87 5e-16
gi|9656915|gb|AAF95490.1| purine nucleoside phosphorylase [Vibri... 85 1e-15
gi|40889963|pdb|1VHW|F Chain F, Crystal Structure Of Purine Nucl... 85 2e-15
gi|56420115|ref|YP_147433.1| purine-nucleoside phosphorylase [Ge... 83 6e-15
gi|33148255|gb|AAP95775.1| purine nucleoside phosphorylase [Haem... 82 2e-14
gi|23099800|ref|NP_693266.1| purine nucleoside phosphorylase [Oc... 82 2e-14
gi|56459285|ref|YP_154566.1| Purine-nucleoside phosphorylase [Id... 81 2e-14
gi|18145060|dbj|BAB81104.1| probable purine nucleoside phosphory... 81 3e-14
gi|54307836|ref|YP_128856.1| putative purine nucleoside phosphor... 80 4e-14
gi|53771223|ref|ZP_00181950.2| COG0813: Purine-nucleoside phosph... 80 4e-14
gi|6459967|gb|AAF11716.1| purine nucleoside phosphorylase [Deino... 80 5e-14
gi|52425954|ref|YP_089091.1| DeoD protein [Mannheimia succinicip... 80 6e-14
gi|14601125|ref|NP_147653.1| purine nucleoside phosphorylase [Ae... 79 8e-14
gi|28211066|ref|NP_782010.1| purine nucleoside phosphorylase [Cl... 79 8e-14
gi|37680860|ref|NP_935469.1| purine-nucleoside phosphorylase [Vi... 79 1e-13
gi|27361234|gb|AAO10143.1| Purine-nucleoside phosphorylase [Vibr... 79 1e-13
gi|32033970|ref|ZP_00134226.1| COG0813: Purine-nucleoside phosph... 78 2e-13
gi|24372802|ref|NP_716844.1| purine nucleoside phosphorylase [Sh... 77 4e-13
gi|29654069|ref|NP_819761.1| phosphorylase family protein [Coxie... 77 4e-13
gi|28899207|ref|NP_798812.1| purine nucleoside phosphorylase [Vi... 77 5e-13
gi|48859933|ref|ZP_00313861.1| COG0813: Purine-nucleoside phosph... 77 5e-13
gi|46015053|pdb|1OVG|C Chain C, M64v Pnp +mepdr >gi|46015052|pdb... 76 7e-13
gi|53728510|ref|ZP_00132458.2| COG0813: Purine-nucleoside phosph... 76 7e-13
gi|16801036|ref|NP_471304.1| purine nucleoside phosphorylase [Li... 76 9e-13
gi|53733053|ref|ZP_00155511.2| COG0813: Purine-nucleoside phosph... 76 9e-13
gi|1790844|gb|AAC77337.1| purine-nucleoside phosphorylase [Esche... 75 1e-12
gi|19745961|ref|NP_607097.1| putative purine nucleoside phosphor... 75 1e-12
gi|16803896|ref|NP_465381.1| purine nucleoside phosphorylase [Li... 75 1e-12
gi|15603156|ref|NP_246228.1| DeoD [Pasteurella multocida subsp. ... 75 1e-12
gi|18312657|ref|NP_559324.1| purine nucleoside phosphorylase [Py... 75 1e-12
gi|46015043|pdb|1OU4|C Chain C, Native Pnp +talo >gi|46015042|pd... 75 1e-12
gi|39654491|pdb|1PKE|C Chain C, Crystal Structure Of E. Coli Pur... 75 1e-12
gi|56480611|ref|NP_710124.2| purine-nucleoside phosphorylase [Sh... 75 2e-12
gi|52143885|ref|YP_082943.1| purine nucleoside phosphorylase [Ba... 75 2e-12
gi|50914062|ref|YP_060034.1| Purine nucleoside phosphorylase [St... 75 2e-12
gi|26251274|ref|NP_757314.1| Purine nucleoside phosphorylase [Es... 75 2e-12
gi|23466608|ref|ZP_00122196.1| COG0813: Purine-nucleoside phosph... 75 2e-12
gi|54301742|ref|YP_131735.1| putative purine nucleoside phosphor... 75 2e-12
gi|53733305|ref|ZP_00349683.1| COG0813: Purine-nucleoside phosph... 75 2e-12
gi|48868453|ref|ZP_00321785.1| COG0813: Purine-nucleoside phosph... 74 3e-12
gi|6010055|emb|CAB57234.1| putative purine-nucleoside phosphoryl... 74 3e-12
gi|52010379|ref|ZP_00337739.1| COG0813: Purine-nucleoside phosph... 74 3e-12
gi|20808171|ref|NP_623342.1| Purine-nucleoside phosphorylase [Th... 74 3e-12
gi|25011300|ref|NP_735695.1| hypothetical protein gbs1251 [Strep... 74 3e-12
gi|15899423|ref|NP_344028.1| 5'-methylthioadenosine phosphorylas... 74 4e-12
gi|47526757|ref|YP_018106.1| purine nucleoside phosphorylase [Ba... 74 4e-12
gi|59714151|ref|YP_206926.1| purine nucleoside phosphorylase [Vi... 74 4e-12
gi|59711114|ref|YP_203890.1| purine nucleoside phosphorylase [Vi... 74 4e-12
gi|58825800|gb|AAW82755.1| adenosine phosphorylase [Bacillus cer... 74 4e-12
gi|48237466|gb|AAT40584.1| putative purine-nucleoside phosphoryl... 74 4e-12
gi|56554504|pdb|1XE3|F Chain F, Crystal Structure Of Purine Nucl... 74 4e-12
gi|30019611|ref|NP_831242.1| Purine nucleoside phosphorylase [Ba... 73 6e-12
gi|48824276|ref|ZP_00285671.1| COG0813: Purine-nucleoside phosph... 73 8e-12
gi|50119675|ref|YP_048842.1| purine nucleoside phosphorylase [Er... 72 1e-11
gi|51594935|ref|YP_069126.1| purine-nucleoside phosphorylase [Ye... 72 1e-11
gi|29374835|ref|NP_813988.1| purine nucleoside phosphorylase [En... 72 1e-11
gi|24377605|gb|AAN58912.1| putative purine nucleoside phosphoryl... 72 1e-11
gi|49484362|ref|YP_041586.1| putative purine nucleoside phosphor... 72 2e-11
gi|56416344|ref|YP_153419.1| purine nucleoside phosphorylase [Sa... 71 2e-11
gi|45443474|ref|NP_995013.1| purine nucleoside phosphorylase [Ye... 71 2e-11
gi|16423136|gb|AAL23385.1| purine-nucleoside phosphorylase [Salm... 71 2e-11
gi|14245903|dbj|BAB56298.1| purine nucleoside phosphorylase [Sta... 71 2e-11
gi|49482379|ref|YP_039603.1| putative purine nucleoside phosphor... 71 3e-11
gi|16120771|ref|NP_404084.1| purine nucleoside phosphorylase [Ye... 70 5e-11
gi|50589970|ref|ZP_00331422.1| COG0813: Purine-nucleoside phosph... 70 5e-11
gi|57867639|ref|YP_189311.1| purine nucleoside phosphorylase [St... 70 5e-11
gi|15829116|ref|NP_326476.1| PURINE NUCLEOSIDE PHOSPHORYLASE (IN... 70 6e-11
gi|56965779|ref|YP_177513.1| purine-nucleoside phosphorylase [Ba... 70 6e-11
gi|56677018|gb|AAV93684.1| purine nucleoside phosphorylase [Sili... 70 6e-11
gi|54020132|ref|YP_115810.1| purine nucleoside phosphorylase [My... 70 6e-11
gi|9657436|gb|AAF95967.1| purine nucleoside phosphorylase [Vibri... 69 8e-11
gi|27468655|ref|NP_765292.1| purine nucleoside phosphorylase [St... 69 1e-10
gi|37524530|ref|NP_927874.1| purine-nucleoside phosphorylase (in... 69 1e-10
gi|21672786|ref|NP_660853.1| purine nucleoside phosphorylase [Bu... 69 1e-10
gi|49243457|emb|CAG41878.1| putative purine nucleoside phosphory... 69 1e-10
gi|10039199|dbj|BAB13233.1| purine nucleoside phosphorylase [Buc... 68 2e-10
gi|16079021|ref|NP_389844.1| purine nucleoside phosphorylase [Ba... 68 2e-10
gi|22218129|gb|AAM94580.1| deoD [Streptococcus thermophilus] 67 3e-10
gi|34764022|ref|ZP_00144909.1| Purine nucleoside phosphorylase [... 67 3e-10
gi|59713585|ref|YP_206360.1| purine nucleoside phosphorylase [Vi... 67 3e-10
gi|2126871|pir||JT0874 purine-nucleoside phosphorylase (EC 2.4.2... 67 3e-10
gi|12746265|gb|AAK07420.1| purine nucleoside phosphorylase [Stre... 67 4e-10
gi|27359460|gb|AAO08404.1| Purine-nucleoside phosphorylase [Vibr... 67 5e-10
gi|37676014|ref|NP_936410.1| purine-nucleoside phosphorylase [Vi... 67 5e-10
gi|52632008|gb|AAU85408.1| hypothetical protein GZ12E1_22 [uncul... 67 5e-10
gi|18076391|emb|CAC82001.1| DeoD protein [Streptococcus thermoph... 67 5e-10
gi|11595686|emb|CAC18350.1| putative purine-nucleotide phosphory... 67 5e-10
gi|55823040|ref|YP_141481.1| purine nucleoside phosphorylase (fa... 66 7e-10
gi|22138044|gb|AAM93389.1| deoD [Streptococcus thermophilus] 66 7e-10
gi|15902782|ref|NP_358332.1| Purine nucleoside phosphorylase (in... 66 9e-10
gi|3323039|gb|AAC65702.1| purine nucleoside phosphorylase (deoD)... 65 1e-09
gi|55821125|ref|YP_139567.1| purine nucleoside phosphorylase (fa... 65 1e-09
gi|28901330|ref|NP_800985.1| purine nucleoside phosphorylase [Vi... 65 1e-09
gi|12044899|ref|NP_072709.1| purine-nucleoside phosphorylase (de... 65 1e-09
gi|2506346|sp|P47295|DEOD_MYCGE Purine nucleoside phosphorylase ... 65 1e-09
gi|21910148|ref|NP_664416.1| putative purine nucleoside phosphor... 65 2e-09
gi|15672913|ref|NP_267087.1| purine nucleoside phosphorylase [La... 65 2e-09
gi|15900722|ref|NP_345326.1| purine nucleoside phosphorylase, fa... 65 2e-09
gi|27904957|ref|NP_778083.1| purine nucleoside phosphorylase [Bu... 65 2e-09
gi|42525979|ref|NP_971077.1| purine nucleoside phosphorylase [Tr... 64 3e-09
gi|2281310|gb|AAC45498.1| purine nucleoside phosphorylase [Lacto... 64 4e-09
gi|2314335|gb|AAD08222.1| purine-nucleoside phosphorylase (deoD)... 64 5e-09
gi|19703773|ref|NP_603335.1| Purine nucleoside phosphorylase [Fu... 63 6e-09
gi|15612169|ref|NP_223821.1| PURINE NUCLEOSIDE PHOSPHORYLASE [He... 61 3e-08
gi|1276873|gb|AAC44007.1| DeoD >gi|2494058|sp|Q56037|DEOD_STRTR ... 61 3e-08
gi|13357841|ref|NP_078115.1| purine-nucleoside phosphorylase [Ur... 60 4e-08
gi|47459370|ref|YP_016232.1| purine-nucleoside phosphorylase [My... 60 5e-08
gi|871396|emb|CAA61137.1| uridine phosphorylase [Klebsiella sp.]... 60 7e-08
gi|48852673|ref|ZP_00306857.1| COG2820: Uridine phosphorylase [F... 59 1e-07
gi|52080655|ref|YP_079446.1| purine nucleoside phosphorylase [Ba... 59 1e-07
gi|38232892|ref|NP_938659.1| purine nucleoside phosphorylase II ... 59 1e-07
gi|26553558|ref|NP_757492.1| purine nucleoside phosphorylase [My... 59 1e-07
gi|56707880|ref|YP_169776.1| purine nucleoside phosphorylase [Fr... 58 2e-07
gi|24374260|ref|NP_718303.1| purine nucleoside phosphorylase [Sh... 57 4e-07
gi|871394|emb|CAA61136.1| purine-nucleoside phosphorylase [Klebs... 57 6e-07
gi|31541636|gb|AAP56936.1| DeoD [Mycoplasma gallisepticum R] >gi... 55 2e-06
gi|1673747|gb|AAB95740.1| purine-nucleoside phosphorylase [Mycop... 53 8e-06
gi|50365480|ref|YP_053905.1| purine-nucleoside phosphorylase [Me... 52 1e-05
gi|48477195|ref|YP_022901.1| purine nucleoside phosphorylase [Pi... 50 5e-05
gi|42561357|ref|NP_975808.1| Purine nucleoside phosphorylase [My... 49 9e-05
gi|34397372|gb|AAQ66435.1| phosphorylase family protein [Porphyr... 49 2e-04
gi|15900020|ref|NP_344624.1| phosphorylase, Pnp/Udp family [Stre... 49 2e-04
gi|13470934|ref|NP_102503.1| purine nucleoside phosphorylase [Me... 48 3e-04
gi|49477890|ref|YP_036950.1| MTA/SAH nucleosidase, N-terminal re... 47 6e-04
gi|42522763|ref|NP_968143.1| AMP nucleosidase [Bdellovibrio bact... 46 8e-04
gi|15902112|ref|NP_357662.1| hypothetical protein spr0068 [Strep... 45 0.001
gi|52841646|ref|YP_095445.1| purine nucleoside phosphorylase II ... 45 0.002
gi|46156866|ref|ZP_00204774.1| COG0775: Nucleoside phosphorylase... 45 0.002
gi|24637473|gb|AAN63744.1| DeoD [Streptococcus thermophilus] 45 0.002
gi|47528161|ref|YP_019510.1| mta/sah nucleosidase / phosphatase,... 45 0.002
gi|55822898|ref|YP_141339.1| phosphorylase, Pnp/Udp family [Stre... 45 0.002
gi|49185679|ref|YP_028931.1| MTA/SAH nucleosidase / phosphatase,... 45 0.002
gi|24637438|gb|AAN63712.1| DeoD [Streptococcus thermophilus] 45 0.002
gi|24637456|gb|AAN63728.1| DeoD [Streptococcus thermophilus] 44 0.003
gi|24636988|gb|AAN63504.1| putative purine-nucleotide phosphoryl... 44 0.003
gi|52142645|ref|YP_084183.1| MTA/SAH nucleosidase/phosphatase, N... 44 0.004
gi|50954858|ref|YP_062146.1| AMP nucleosidase [Leifsonia xyli su... 44 0.004
gi|55819668|ref|YP_143156.1| unknown [Acanthomoeba polyphaga mim... 44 0.004
gi|24637490|gb|AAN63760.1| DeoD [Streptococcus thermophilus] 44 0.004
gi|48856581|ref|ZP_00310738.1| COG0775: Nucleoside phosphorylase... 44 0.005
gi|15605484|ref|NP_220270.1| AMP Nucleosidase [Chlamydia trachom... 44 0.005
gi|29349962|ref|NP_813465.1| purine nucleoside phosphorylase II ... 44 0.005
gi|23467396|ref|ZP_00122978.1| COG0775: Nucleoside phosphorylase... 44 0.005
gi|24637513|gb|AAN63782.1| DeoD [Streptococcus thermophilus] 44 0.005
gi|24637420|gb|AAN63696.1| DeoD [Streptococcus thermophilus] 44 0.005
gi|56421077|ref|YP_148395.1| nucleoside phosphorylase ( 5'-methy... 43 0.006
gi|55820630|ref|YP_139072.1| phosphorylase, Pnp/Udp family, puta... 43 0.006
gi|24637398|gb|AAN63676.1| DeoD [Streptococcus thermophilus] 43 0.006
gi|24473734|gb|AAL23725.1| DeoD [Streptococcus thermophilus] 43 0.006
gi|53712467|ref|YP_098459.1| purine nucleoside phosphorylase II ... 43 0.008
gi|60492102|emb|CAH06865.1| putative purine nucleoside phosphory... 43 0.008
gi|55822521|ref|YP_140962.1| phosphorylase, Pnp/Udp family, puta... 42 0.011
gi|54294302|ref|YP_126717.1| hypothetical protein lpl1367 [Legio... 42 0.011
gi|24378485|gb|AAN59718.1| putative purine-nucleoside phosphoryl... 42 0.011
gi|7190168|gb|AAF39010.1| AMP nucleosidase-related protein [Chla... 42 0.011
gi|20071298|gb|AAH27189.1| Upp2 protein [Mus musculus] 42 0.014
gi|34556949|ref|NP_906764.1| HOMOCYSTEINE NUCLEASE [Wolinella su... 42 0.014
gi|54297326|ref|YP_123695.1| hypothetical protein lpp1371 [Legio... 42 0.014
gi|47567687|ref|ZP_00238397.1| MTA/SAH nucleosidase [Bacillus ce... 42 0.014
gi|27597065|ref|NP_083968.1| liver-specific uridine phosphorylas... 42 0.014
gi|6459209|gb|AAF11019.1| 5`-methylthioadenosine/S-adenosylhomoc... 42 0.014
gi|52627365|gb|AAU84696.1| phosphorylase family protein [Prevote... 41 0.025
gi|34485059|gb|AAQ72931.1| 5'-methylthioadenosine/S-adenosylhomo... 41 0.032
gi|28900944|ref|NP_800599.1| putative 5'-methylthioadenosine/S-a... 41 0.032
gi|29346298|ref|NP_809801.1| AMP nucleosidase [Bacteroides theta... 41 0.032
gi|50736037|ref|XP_419026.1| PREDICTED: similar to Uridine phosp... 41 0.032
gi|50750846|ref|XP_422171.1| PREDICTED: similar to Upp2 protein ... 40 0.042
gi|10173895|dbj|BAB04998.1| 5'-methylthioadenosine nucleosidase/... 40 0.042
gi|34849430|gb|AAP58929.1| purine-nucleoside phosphorylase [Spir... 40 0.072
gi|28211281|ref|NP_782225.1| 5-methylthioadenosine nucleosidase;... 40 0.072
gi|39996763|ref|NP_952714.1| phosphorylase family protein [Geoba... 39 0.094
gi|42781953|ref|NP_979200.1| MTA/SAH nucleosidase / phosphatase,... 39 0.12
gi|26336100|dbj|BAC31735.1| unnamed protein product [Mus musculus] 39 0.12
gi|46192070|ref|ZP_00007369.2| COG1028: Dehydrogenases with diff... 39 0.16
gi|12840702|dbj|BAB24924.1| unnamed protein product [Mus musculus] 39 0.16
gi|34854846|ref|XP_229938.2| similar to liver-specific uridine p... 38 0.21
gi|16079781|ref|NP_390605.1| methylthioadenosine nucleosidase [B... 38 0.21
gi|55612278|ref|XP_525947.1| PREDICTED: similar to uridine phosp... 37 0.36
gi|25010522|ref|NP_734917.1| hypothetical protein gbs0449 [Strep... 37 0.36
gi|15611153|ref|NP_222804.1| hypothetical protein jhp0082 [Helic... 37 0.47
gi|27597096|ref|NP_775491.1| uridine phosphorylase 2 [Homo sapie... 37 0.61
gi|22536597|ref|NP_687448.1| hypothetical protein SAG0414 [Strep... 37 0.61
>gi|29610317|dbj|BAC74364.1| putative uridine phosphorylase
[Streptomyces avermitilis MA-4680]
ref|NP_827829.1| putative uridine phosphorylase [Streptomyces avermitilis MA-4680]
Length = 262
Score = 152 bits (385), Expect = 6e-36
Identities = 100/250 (40%), Positives = 138/250 (55%), Gaps = 17/250 (6%)
Query: 7 PICLLPIGKLPKVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSH 66
P+ +P LP VVVGDP RA V+ E V RE+ ++G WK + V SH
Sbjct: 7 PVTRIPRTGLPPYAVVVGDPARAAAVAAL-LDGAEEVSYHREYRVFRGAWKGLPVTVASH 65
Query: 67 GIGGGGASVCFEELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLG 126
G+GG GA + F+EL AGV T +R GTAG+ P +G LVIA AVR DGV++ L+P
Sbjct: 66 GVGGPGAILLFQELADAGVRTFVRFGTAGAMKPGIGDGDLVIAEAAVRDDGVTQQLLPAA 125
Query: 127 YPAISDHEVVGALIESAKSNGLSNEQYGVGIITTVGHFFDG--PLGNHNKLWARSKVLAI 184
YPA+S E V AL +A+ G + + GI+ T F G PL +AR+ + AI
Sbjct: 126 YPAVSAPEAVLALQRAARETGAPHHR---GIVWTRAAFQPGLIPLDG----YARAGLAAI 178
Query: 185 EMEASILFIVASLRGIRAGACVNIDNYIFEREISE-------KYEPNRDVVHQGTFKMLE 237
EME S L + ASLRG+ AG + +D + + E Y+P+RDVV G +
Sbjct: 179 EMELSALLVTASLRGLVAGGVLVVDGANADELVDEDALLTTGAYDPHRDVVAAGVERGAV 238
Query: 238 VALDAAKRLS 247
V+L+A + L+
Sbjct: 239 VSLEALRLLA 248
>gi|32035117|ref|ZP_00135169.1| COG2820: Uridine phosphorylase
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
Length = 254
Score = 122 bits (307), Expect = 6e-27
Identities = 80/243 (32%), Positives = 120/243 (48%), Gaps = 22/243 (9%)
Query: 18 KVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCF 77
KV +V GDP R++ +++K E + + REF + G ++V S GIGG S+C
Sbjct: 18 KVAIVPGDPARSERIAQK-MQNPEFLVSTREFTSWLGYVGGEPIVVCSTGIGGPSVSICV 76
Query: 78 EELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVG 137
EEL Q GV T +R GT G+ P G +++ TGAVR DG S PL YPA+++ E
Sbjct: 77 EELAQLGVRTFLRIGTTGAIQPHINVGEVLVTTGAVRLDGASRHFAPLEYPAVANFECTN 136
Query: 138 ALIESAKSNGLSNEQYGVGIITTVGHFFDGP-------------LGNHNKLWARSKVLAI 184
L +AK+ G++ VGI + F+ G K W V+
Sbjct: 137 ELYAAAKNQGVTPY---VGITASSDTFYPGQERYDTYSGKVYRHFQGSLKQWQELNVMNF 193
Query: 185 EMEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAK 244
EME++ LF + S G+RAG + ++EI PN +H + VA++AA
Sbjct: 194 EMESATLFTMCSALGLRAGMVSGVIVNRTQQEI-----PNEATIHATEQTAIAVAVEAAG 248
Query: 245 RLS 247
+L+
Sbjct: 249 KLA 251
>gi|1573245|gb|AAC21943.1| uridine phosphorylase (udp) [Haemophilus
influenzae Rd KW20]
pir||C64059 uridine phosphorylase (EC 2.4.2.3) - Haemophilus influenzae
(strain Rd KW20)
Length = 259
Score = 121 bits (304), Expect = 1e-26
Identities = 84/243 (34%), Positives = 121/243 (49%), Gaps = 22/243 (9%)
Query: 19 VCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCFE 78
+ +V GDP R++ ++ K E + + REF + G ++V S GIGG S+C E
Sbjct: 26 LAIVPGDPARSERIA-KQLDNPEFLTSTREFTSWLGYINGQPIVVCSTGIGGPSTSICVE 84
Query: 79 ELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVGA 138
EL Q GV T +R GT G+ P G ++I T AVR DG S VPL YPA+++ E A
Sbjct: 85 ELAQLGVRTFLRIGTTGAIQPHINVGDVLITTAAVRLDGASHHFVPLEYPAVANFECTTA 144
Query: 139 LIESAKSNGLSNEQYGVGIITTVGHFFDGP----------LGNHN---KLWARSKVLAIE 185
L +AK+ G+ E Y VG+ + F+ G N+ K W V+ E
Sbjct: 145 LYNAAKAKGI--EPY-VGVTVSSDTFYPGQERYDTYSGKVYRNYQGLLKQWQDLNVMNYE 201
Query: 186 MEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAKR 245
ME+S LF + S G+RAG + ++EI PN + Q K + V + AA+
Sbjct: 202 MESSTLFTMCSALGLRAGMVAGVIVNRTQQEI-----PNEATIKQTEEKAVSVVITAAQA 256
Query: 246 LSS 248
L S
Sbjct: 257 LLS 259
>gi|30995365|ref|NP_438448.2| uridine phosphorylase [Haemophilus
influenzae Rd KW20]
sp|P43770|UDP_HAEIN Uridine phosphorylase (UrdPase) (UPase)
Length = 252
Score = 121 bits (304), Expect = 1e-26
Identities = 84/243 (34%), Positives = 121/243 (49%), Gaps = 22/243 (9%)
Query: 19 VCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCFE 78
+ +V GDP R++ ++ K E + + REF + G ++V S GIGG S+C E
Sbjct: 19 LAIVPGDPARSERIA-KQLDNPEFLTSTREFTSWLGYINGQPIVVCSTGIGGPSTSICVE 77
Query: 79 ELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVGA 138
EL Q GV T +R GT G+ P G ++I T AVR DG S VPL YPA+++ E A
Sbjct: 78 ELAQLGVRTFLRIGTTGAIQPHINVGDVLITTAAVRLDGASHHFVPLEYPAVANFECTTA 137
Query: 139 LIESAKSNGLSNEQYGVGIITTVGHFFDGP----------LGNHN---KLWARSKVLAIE 185
L +AK+ G+ E Y VG+ + F+ G N+ K W V+ E
Sbjct: 138 LYNAAKAKGI--EPY-VGVTVSSDTFYPGQERYDTYSGKVYRNYQGLLKQWQDLNVMNYE 194
Query: 186 MEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAKR 245
ME+S LF + S G+RAG + ++EI PN + Q K + V + AA+
Sbjct: 195 MESSTLFTMCSALGLRAGMVAGVIVNRTQQEI-----PNEATIKQTEEKAVSVVITAAQA 249
Query: 246 LSS 248
L S
Sbjct: 250 LLS 252
>gi|42629743|ref|ZP_00155288.1| COG2820: Uridine phosphorylase
[Haemophilus influenzae R2846]
Length = 252
Score = 121 bits (304), Expect = 1e-26
Identities = 84/243 (34%), Positives = 121/243 (49%), Gaps = 22/243 (9%)
Query: 19 VCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCFE 78
+ +V GDP R++ ++ K E + + REF + G ++V S GIGG S+C E
Sbjct: 19 LAIVPGDPARSERIA-KQLDNPEFLASTREFTSWLGYINGQPIVVCSTGIGGPSTSICVE 77
Query: 79 ELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVGA 138
EL Q GV T +R GT G+ P G ++I T AVR DG S VPL YPA+++ E A
Sbjct: 78 ELAQLGVRTFLRIGTTGAIQPHINVGDVLITTAAVRLDGASRHFVPLEYPAVANFECTTA 137
Query: 139 LIESAKSNGLSNEQYGVGIITTVGHFFDGP----------LGNHN---KLWARSKVLAIE 185
L +AK+ G+ E Y VG+ + F+ G N+ K W V+ E
Sbjct: 138 LYNAAKAKGI--EPY-VGVTVSSDTFYPGQERYDTYSGKVYRNYQGLLKQWQDLNVMNYE 194
Query: 186 MEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAKR 245
ME+S LF + S G+RAG + ++EI PN + Q K + V + AA+
Sbjct: 195 MESSTLFTMCSALGLRAGMVAGVIVNRTQQEI-----PNEATIKQTEEKAVSVVIAAAQA 249
Query: 246 LSS 248
L S
Sbjct: 250 LLS 252
>gi|42630579|ref|ZP_00156118.1| COG2820: Uridine phosphorylase
[Haemophilus influenzae R2866]
Length = 252
Score = 120 bits (302), Expect = 2e-26
Identities = 83/243 (34%), Positives = 121/243 (49%), Gaps = 22/243 (9%)
Query: 19 VCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCFE 78
+ +V GDP R++ ++ K E + + REF + G ++V S GIGG S+C E
Sbjct: 19 LAIVPGDPARSERIA-KQLDNPEFLASTREFTSWLGYVNGQPIVVCSTGIGGPSTSICVE 77
Query: 79 ELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVGA 138
EL Q GV T +R GT G+ P G ++I T +VR DG S VPL YPA+++ E A
Sbjct: 78 ELAQLGVRTFLRIGTTGAIQPHINVGDVLITTASVRLDGASHHFVPLEYPAVANFECTTA 137
Query: 139 LIESAKSNGLSNEQYGVGIITTVGHFFDGP----------LGNHN---KLWARSKVLAIE 185
L +AK+ G+ E Y VG+ + F+ G N+ K W V+ E
Sbjct: 138 LYNAAKAKGI--EPY-VGVTVSSDTFYPGQERYDTYSGKVYRNYQGLLKQWQDLNVMNYE 194
Query: 186 MEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAKR 245
ME+S LF + S G+RAG + ++EI PN + Q K + V + AA+
Sbjct: 195 MESSTLFTMCSALGLRAGMVAGVIVNRTQQEI-----PNEATIKQTEEKAVSVVITAAQA 249
Query: 246 LSS 248
L S
Sbjct: 250 LLS 252
>gi|52426373|ref|YP_089510.1| Udp protein [Mannheimia
succiniciproducens MBEL55E]
gb|AAU38925.1| Udp protein [Mannheimia succiniciproducens MBEL55E]
Length = 253
Score = 119 bits (297), Expect = 9e-26
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 22/243 (9%)
Query: 18 KVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCF 77
KV +V GDP R++ ++ K E + + REF + G ++V S GIGG S+C
Sbjct: 18 KVAIVPGDPARSERIA-KEMENAEYLNSTREFTSWLGYMDGEPIVVCSTGIGGPSVSICV 76
Query: 78 EELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVG 137
EEL Q GV T +R GT G+ P G ++I TGAVR DG S+ PL YPA++D
Sbjct: 77 EELAQLGVRTFLRIGTTGAIQPHINVGDILITTGAVRLDGASQHFAPLEYPAVADFACTN 136
Query: 138 ALIESAKSNGLSNEQYGVGIITTVGHFFDG-------------PLGNHNKLWARSKVLAI 184
AL +A S G+ + VGI + F+ G K W V+
Sbjct: 137 ALYNAALSQGI---RPYVGITASSDTFYPGQERYDTFSGKVYPKFQGTLKQWQDLNVMNY 193
Query: 185 EMEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAK 244
EME++ LF + + G++AG + ++EI PN + K + VA++AA
Sbjct: 194 EMESATLFTMCAALGLKAGMVAGVIVNRTQQEI-----PNEATIKSTEQKAVAVAVEAAG 248
Query: 245 RLS 247
+++
Sbjct: 249 KMA 251
>gi|48868641|ref|ZP_00321950.1| COG2820: Uridine phosphorylase
[Haemophilus influenzae 86-028NP]
Length = 252
Score = 119 bits (297), Expect = 9e-26
Identities = 83/243 (34%), Positives = 119/243 (48%), Gaps = 22/243 (9%)
Query: 19 VCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCFE 78
+ +V GDP R++ ++ K E + + REF + G ++V S GIGG S+C E
Sbjct: 19 LAIVPGDPARSERIA-KQLDNPEFLTSTREFTSWLGYINGQPIVVCSTGIGGPSTSICVE 77
Query: 79 ELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVGA 138
EL Q GV T +R GT G+ P G ++I T AVR DG S VPL YPA+++ E A
Sbjct: 78 ELAQLGVRTFLRIGTTGAIQPHINVGDVLITTAAVRLDGASCHFVPLEYPAVANFECTTA 137
Query: 139 LIESAKSNGLSNEQYGVGIITTVGHFFDGPLGNHN-------------KLWARSKVLAIE 185
L +AK+ G+ E Y VG+ + F+ G K W V+ E
Sbjct: 138 LYNAAKAKGI--EPY-VGVTVSSDTFYPGQERYDTYSGKVYRDYQGLLKQWQDLNVMNYE 194
Query: 186 MEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAKR 245
ME+S LF + S G+RAG + ++EI PN + Q K + V + AA+
Sbjct: 195 MESSTLFTMCSALGLRAGMVAGVIVNRTQQEI-----PNEATIKQTEEKAVSVVIAAAQA 249
Query: 246 LSS 248
L S
Sbjct: 250 LLS 252
>gi|18313830|ref|NP_560497.1| uridine phosphorylase [Pyrobaculum
aerophilum str. IM2]
gb|AAL64679.1| uridine phosphorylase [Pyrobaculum aerophilum str. IM2]
Length = 261
Score = 117 bits (293), Expect = 3e-25
Identities = 84/250 (33%), Positives = 129/250 (51%), Gaps = 25/250 (10%)
Query: 10 LLPIGKLPKVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIG 69
LL G++P+ ++ GDP R L++ KH+ V REF Y G +K + S GIG
Sbjct: 15 LLAQGEIPRYVLLPGDPGRVPLIA-KHWDEAREVARNREFVTYVGRYKGVSIGATSTGIG 73
Query: 70 GGGASVCFEELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPA 129
G ++ EEL+ AG T IR GT G+ + G L+I AVR DG S P YPA
Sbjct: 74 SGSTAIAVEELLYAGADTFIRVGTTGALWRHIKLGDLIIGAAAVRWDGASRWYAPPEYPA 133
Query: 130 ISDHEVVGALIESAKSNGLSNEQYGVGIITTVGHFFDGP----LGNHNKLWARS------ 179
++ VV AL+++A+S G+ ++ VGI+ + F+ G G WA+
Sbjct: 134 VAHWVVVNALVKAAESLGV---RHHVGIVASTDSFYVGQERPGHGGFLPPWAKGLIEALR 190
Query: 180 --KVLAIEMEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLE 237
VL+ EME++ +F +AS+ G RAG + I RE ++++ P G + ++
Sbjct: 191 GLMVLSFEMESATIFTLASIYGARAGGVYAV---IANRE-TDEFAP-----EVGVEEAIK 241
Query: 238 VALDAAKRLS 247
VA +A K L+
Sbjct: 242 VANEAVKILA 251
>gi|51893293|ref|YP_075984.1| uridine phosphorylase [Symbiobacterium
thermophilum IAM 14863]
dbj|BAD41140.1| uridine phosphorylase [Symbiobacterium thermophilum IAM 14863]
Length = 249
Score = 114 bits (285), Expect = 2e-24
Identities = 68/204 (33%), Positives = 104/204 (50%), Gaps = 15/204 (7%)
Query: 5 VTPICLLPIGKLPKVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVM 64
V P LLP GDP R ++ + ++ C RE+ G ++ +
Sbjct: 15 VAPFVLLP-----------GDPGRIHAIAAQLDRWEQIACN-REYRTITGTFRGMPVSAT 62
Query: 65 SHGIGGGGASVCFEELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVP 124
S GIGG ++ EELI+ G +IR G+AG+ P R G L++A GAVR +G S VP
Sbjct: 63 STGIGGPSTAIAVEELIRVGARVLIRVGSAGALQPGIRVGDLLVAVGAVREEGASAMYVP 122
Query: 125 LGYPAISDHEVVGALIESAKSNGLSNEQYGVGIITTVGHFFDGPLGNHNKLWARSKVLAI 184
YPA+SDH V+ AL+++A G++ G++ + F+ + WA VL
Sbjct: 123 PAYPAVSDHAVLAALLKAAGDLGVTAH---AGLVRSHDSFYTDREDELTRFWAGKGVLGS 179
Query: 185 EMEASILFIVASLRGIRAGACVNI 208
+ME + L +A LRG RA + +N+
Sbjct: 180 DMETATLLTLARLRGARAASVLNV 203
>gi|19746796|ref|NP_607932.1| putative uridine phosphorylase
[Streptococcus pyogenes MGAS8232]
ref|NP_801516.1| putative uridine phosphorylase [Streptococcus pyogenes SSI-1]
ref|NP_736459.1| hypothetical protein gbs2026 [Streptococcus agalactiae NEM316]
ref|NP_689058.1| uridine phosphorylase [Streptococcus agalactiae 2603V/R]
ref|NP_665417.1| putative uridine phosphorylase [Streptococcus pyogenes MGAS315]
gb|AAN00931.1| uridine phosphorylase [Streptococcus agalactiae 2603V/R]
gb|AAM80220.1| putative uridine phosphorylase [Streptococcus pyogenes MGAS315]
emb|CAD47685.1| Unknown [Streptococcus agalactiae NEM316]
gb|AAL98431.1| putative uridine phosphorylase [Streptococcus pyogenes MGAS8232]
gb|AAK34583.1| putative uridine phosphorylase [Streptococcus pyogenes M1 GAS]
dbj|BAC63349.1| putative uridine phosphorylase [Streptococcus pyogenes SSI-1]
ref|NP_269862.1| putative uridine phosphorylase [Streptococcus pyogenes M1 GAS]
Length = 259
Score = 114 bits (285), Expect = 2e-24
Identities = 71/201 (35%), Positives = 103/201 (50%), Gaps = 14/201 (6%)
Query: 14 GKLPKVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGA 73
G + + ++ GDP R ++E HF LV RE+ Y G ++ V S GIGG A
Sbjct: 19 GDVGRYVIMPGDPKRCAKIAE-HFDNAVLVADSREYVTYTGTLNGEKVSVTSTGIGGPSA 77
Query: 74 SVCFEELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDH 133
S+ EEL G T IR GT G D + G +VIATGA+R +G S+ P+ +PA++D
Sbjct: 78 SIAMEELKLCGADTFIRVGTCGGIDLDVKGGDIVIATGAIRMEGTSKEYAPIEFPAVADL 137
Query: 134 EVVGALIESAKSNGLSNEQYGVGIITTVGHFF----------DGPLGNHNKLWARSKVLA 183
EV AL+ +AK G ++ G++ F+ L N + W R A
Sbjct: 138 EVTNALVNAAKKLGYTSH---AGVVQCKDAFYGQHEPERMPVSYELLNKWEAWKRLGTKA 194
Query: 184 IEMEASILFIVASLRGIRAGA 204
EME++ LF+ AS G+R G+
Sbjct: 195 SEMESAALFVAASHLGVRCGS 215
>gi|56807963|ref|ZP_00365778.1| COG2820: Uridine phosphorylase
[Streptococcus pyogenes M49 591]
Length = 250
Score = 112 bits (281), Expect = 7e-24
Identities = 70/194 (36%), Positives = 100/194 (51%), Gaps = 14/194 (7%)
Query: 21 VVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCFEEL 80
++ GDP R ++E HF LV RE+ Y G ++ V S GIGG AS+ EEL
Sbjct: 17 IMPGDPKRCPKIAE-HFDNAVLVADSREYVTYTGTLNGEKVSVTSTGIGGPSASIAMEEL 75
Query: 81 IQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVGALI 140
G T IR GT G D + G +VIATGA+R +G S+ P+ +PA++D EV AL+
Sbjct: 76 KLCGADTFIRVGTCGGIDLDVKGGDIVIATGAIRMEGTSKEYAPIEFPAVADLEVTNALV 135
Query: 141 ESAKSNGLSNEQYGVGIITTVGHFF----------DGPLGNHNKLWARSKVLAIEMEASI 190
+AK G ++ G++ F+ L N + W R A EME++
Sbjct: 136 NAAKKLGYTSH---AGVVQCKDAFYGQHEPERMPVSYELLNKWEAWKRLGTKASEMESAA 192
Query: 191 LFIVASLRGIRAGA 204
LF+ AS G+R G+
Sbjct: 193 LFVAASHLGVRCGS 206
>gi|50914945|ref|YP_060917.1| Uridine phosphorylase [Streptococcus
pyogenes MGAS10394]
gb|AAT87734.1| Uridine phosphorylase [Streptococcus pyogenes MGAS10394]
Length = 259
Score = 112 bits (281), Expect = 7e-24
Identities = 70/201 (34%), Positives = 103/201 (50%), Gaps = 14/201 (6%)
Query: 14 GKLPKVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGA 73
G + + ++ GDP R ++E HF LV RE+ Y G ++ V S GIGG A
Sbjct: 19 GDVGRYVIMPGDPKRCAKIAE-HFDNAVLVADSREYVTYTGTLNGEKVSVTSTGIGGPSA 77
Query: 74 SVCFEELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDH 133
S+ EEL G T IR GT G + + G +VIATGA+R +G S+ P+ +PA++D
Sbjct: 78 SIAMEELKLCGADTFIRVGTCGGIELDVKGGDIVIATGAIRMEGTSKEYAPIEFPAVADL 137
Query: 134 EVVGALIESAKSNGLSNEQYGVGIITTVGHFF----------DGPLGNHNKLWARSKVLA 183
EV AL+ +AK G ++ G++ F+ L N + W R A
Sbjct: 138 EVTNALVNAAKKLGYTSH---AGVVQCKDAFYGQHEPERMPVSYELLNKWEAWKRLGTKA 194
Query: 184 IEMEASILFIVASLRGIRAGA 204
EME++ LF+ AS G+R G+
Sbjct: 195 SEMESAALFVAASHLGVRCGS 215
>gi|18144045|dbj|BAB80093.1| probable uridine phosphorylase
[Clostridium perfringens str. 13]
ref|NP_561303.1| probable uridine phosphorylase [Clostridium perfringens str. 13]
Length = 261
Score = 112 bits (281), Expect = 7e-24
Identities = 71/214 (33%), Positives = 110/214 (51%), Gaps = 15/214 (7%)
Query: 14 GKLPKVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGA 73
G++ K ++ GDP R ++ K+ +LV RE+ Y G ++ V S GIGG A
Sbjct: 18 GEVGKYVIMPGDPKRCAKIA-KYLDNAKLVADKREYVTYTGYLDGEKVSVTSTGIGGPSA 76
Query: 74 SVCFEELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDH 133
++ EEL++ G T IR GT G D + G L+IATG++R++G S P+ +PA+++
Sbjct: 77 AIALEELVKCGADTFIRVGTCGGIDLNVKGGDLIIATGSIRAEGTSREYAPIEFPAVANL 136
Query: 134 EVVGALIESAKSNGLSNEQYGVGIITTVGHFF----------DGPLGNHNKLWARSKVLA 183
+V+ AL++ AK Y G++ + F+ L N + W R L
Sbjct: 137 DVINALVKGAKE---LKVPYHTGVVQSKDSFYGQHSPETKPVSYDLLNKWEAWKRCGCLG 193
Query: 184 IEMEASILFIVASLRGIRAGAC-VNIDNYIFERE 216
EME + LFIV S +R GA + I N E+E
Sbjct: 194 SEMEGAALFIVGSYLRVRVGAVFLTIANQEREKE 227
>gi|29143708|ref|NP_807050.1| probable uridine phosphorylase
[Salmonella enterica subsp. enterica serovar Typhi Ty2]
ref|NP_457836.1| probable uridine phosphorylase [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
emb|CAD09405.1| probable uridine phosphorylase [Salmonella enterica subsp. enterica
serovar Typhi]
gb|AAO70910.1| probable uridine phosphorylase [Salmonella enterica subsp. enterica
serovar Typhi Ty2]
pir||AC0923 probable uridine phosphorylase [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
Length = 247
Score = 111 bits (277), Expect = 2e-23
Identities = 69/228 (30%), Positives = 114/228 (49%), Gaps = 8/228 (3%)
Query: 18 KVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCF 77
K ++ GDP R ++ + E++ REF +G ++ E++V+S GIGG ++
Sbjct: 15 KYALLPGDPGRVDRIA-RFLDKAEILGQNREFRAARGWYQGVEIVVLSTGIGGPSTAIAI 73
Query: 78 EELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVG 137
EEL Q GV T+IR G+ G+ G ++IA GAV DG S+ P YPA +D +
Sbjct: 74 EELRQVGVNTLIRIGSCGALQDSLALGDVIIAHGAVADDGASKTYAPASYPACADPYLTA 133
Query: 138 ALIESAKSNGLSNEQYGVGIITTVGHFFDGPLGNHNKLWARSKVLAIEMEASILFIVASL 197
LI+ AK +S G++ + F+ + W+ VL +ME + L +V +L
Sbjct: 134 TLIQQAKQMNISAV---CGLVRSHDSFYTDREAELDAEWSARGVLGADMETAALMVVGAL 190
Query: 198 RGIRAGACVNI---DNYIFEREISEKYEPNRDVVHQGTFKMLEVALDA 242
RG+R + +N+ + E I+ Y + QG + + +AL A
Sbjct: 191 RGLRTASLLNVVVAHSGCLESSINH-YVQQETLCQQGEERQISLALQA 237
>gi|14601845|ref|NP_148386.1| uridine phosphorylase [Aeropyrum
pernix K1]
dbj|BAA81116.1| 254aa long hypothetical uridine phosphorylase [Aeropyrum pernix K1]
pir||D72516 probable uridine phosphorylase APE2105 - Aeropyrum pernix (strain
K1)
Length = 254
Score = 109 bits (273), Expect = 6e-23
Identities = 71/210 (33%), Positives = 110/210 (51%), Gaps = 17/210 (8%)
Query: 16 LPKVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASV 75
+ + ++ GDP R L++ + + LV RE+ + G +K T + V S GIG ++
Sbjct: 1 MARYVLLPGDPERTDLIA-RLWDEARLVAHHREYRTWTGFYKGTSISVTSTGIGSPSTAI 59
Query: 76 CFEELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEV 135
EEL++ G T IR GT G R G+LVI + AVR +G S P G+PA + ++V
Sbjct: 60 AVEELLRVGAETFIRVGTMGGIREDLRPGTLVIGSAAVRMEGTSGQYAPRGFPAAASYDV 119
Query: 136 VGALIESAKSNGLSNEQYGVGIITTVGHFFDGP----LGNHN--------KLWARSKVLA 183
V AL+E+A++ G+ +Y VG++ + F+ G G + L + VL
Sbjct: 120 VAALVEAAEALGV---RYEVGVVASTDSFYLGQGRPGYGGYMTPEASEVIPLLRSAGVLG 176
Query: 184 IEMEASILFIVASLRGIRAG-ACVNIDNYI 212
EMEAS LF ++ L G RAG C + N +
Sbjct: 177 FEMEASALFTLSQLYGARAGCVCAVVANRV 206
>gi|55232694|gb|AAV48113.1| uridine phosphorylase [Haloarcula
marismortui ATCC 43049]
ref|YP_137819.1| uridine phosphorylase [Haloarcula marismortui ATCC 43049]
Length = 241
Score = 109 bits (272), Expect = 7e-23
Identities = 75/252 (29%), Positives = 124/252 (48%), Gaps = 27/252 (10%)
Query: 7 PICLLPIGKLPKVCVVVGDPNRAKLVS---EKHFVVTELVCAVREFHCYKGMWKDTEMLV 63
P L+ G L + +V GDP R ++ + H VV E RE+ + E+ +
Sbjct: 5 PHLLVEPGDLTDIALVPGDPGRVDRIAGLCDDHEVVAEN----REYKLVNATYDGRELTI 60
Query: 64 MSHGIGGGGASVCFEELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLV 123
S GIG ++ EEL GV T+IR GT G+ G +V+A GA + +G S+
Sbjct: 61 CSTGIGSPSTAIAVEELEAVGVETLIRVGTTGALQEGIEIGDMVVANGAAKDEGTSQRYE 120
Query: 124 PLGYPAISDHEVVGALIESAKSNGLSNEQYGVGIITTVGHFFDGPLGNHNKLWARSKVLA 183
PA+ D++V+ +L+++A++N +E VG I T F+ + W + +LA
Sbjct: 121 SKAVPAVPDYDVLSSLVDAAEAN---DEDVHVGPIATDDAFY-AETDEYINDWEAAGLLA 176
Query: 184 IEMEASILFIVASLRGIRAGACVNIDNYIFE---------REISEKYEPNRDVVHQGTFK 234
+EMEA+ LF + +G+R+GA +D + E E+ EK + N + +
Sbjct: 177 VEMEAAALFSLCRRKGLRSGAICTVDGNLVEGTQKGETEDEELPEKAKNNVE-------R 229
Query: 235 MLEVALDAAKRL 246
+E++L AA L
Sbjct: 230 AIEISLTAAASL 241
>gi|3323355|gb|AAC65977.1| uridine phosphorylase (udp) [Treponema
pallidum subsp. pallidum str. Nichols]
ref|NP_219464.1| uridine phosphorylase (udp) [Treponema pallidum subsp. pallidum
str. Nichols]
pir||F71251 probable uridine phosphorylase (udp) - syphilis spirochete
sp|O83990|UDP_TREPA Uridine phosphorylase (UrdPase) (UPase)
Length = 258
Score = 108 bits (271), Expect = 1e-22
Identities = 74/243 (30%), Positives = 121/243 (49%), Gaps = 27/243 (11%)
Query: 21 VVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCFEEL 80
++ GDP R++ +++ HF V RE+ Y G +T + VMS GIGG ++ EEL
Sbjct: 25 ILPGDPARSEKIAQ-HFSHPHKVGHNREYVTYTGTLCETPVSVMSTGIGGPSTAIGVEEL 83
Query: 81 IQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVGALI 140
I G T IR GT+G P G++VIATGA+R +G S+ P+ +PA+ D V AL
Sbjct: 84 IHLGAHTFIRVGTSGGMQPDILAGTVVIATGAIRFEGTSKEYAPVEFPAVPDFTVTAALK 143
Query: 141 ESAKSNGLSNEQYGVGIITTVGHFFDGPLGNHN--------------KLWARSKVLAIEM 186
+A+ ++ +G++ +F+ G H+ W LA EM
Sbjct: 144 HAAED---VQVRHALGVVQCKDNFY----GQHSPHTMPVHAELTQKWHAWIACNTLASEM 196
Query: 187 EASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAKRL 246
E++ LF++ S+R +R GA + + + + + D+ T + VA++A K L
Sbjct: 197 ESAALFVLGSVRRVRTGAVLLVIG-----NQTRRAQGLEDIQVHDTENAIRVAVEAVKLL 251
Query: 247 SSQ 249
+Q
Sbjct: 252 ITQ 254
>gi|46199372|ref|YP_005039.1| purine nucleoside phosphorylase
[Thermus thermophilus HB27]
ref|YP_144701.1| purine nucleoside phosphorylase [Thermus thermophilus HB8]
pdb|1ODL|F Chain F, Purine Nucleoside Phosphorylase From Thermus Thermophilus
pdb|1ODL|E Chain E, Purine Nucleoside Phosphorylase From Thermus Thermophilus
pdb|1ODL|D Chain D, Purine Nucleoside Phosphorylase From Thermus Thermophilus
pdb|1ODL|C Chain C, Purine Nucleoside Phosphorylase From Thermus Thermophilus
pdb|1ODL|B Chain B, Purine Nucleoside Phosphorylase From Thermus Thermophilus
pdb|1ODL|A Chain A, Purine Nucleoside Phosphorylase From Thermus Thermophilus
pdb|1ODK|F Chain F, Purine Nucleoside Phosphorylase From Thermus Thermophilus
pdb|1ODK|E Chain E, Purine Nucleoside Phosphorylase From Thermus Thermophilus
pdb|1ODK|D Chain D, Purine Nucleoside Phosphorylase From Thermus Thermophilus
pdb|1ODK|C Chain C, Purine Nucleoside Phosphorylase From Thermus Thermophilus
pdb|1ODK|B Chain B, Purine Nucleoside Phosphorylase From Thermus Thermophilus
pdb|1ODK|A Chain A, Purine Nucleoside Phosphorylase From Thermus Thermophilus
pdb|1ODJ|F Chain F, Purine Nucleoside Phosphorylase From Thermus Thermophilus
pdb|1ODJ|E Chain E, Purine Nucleoside Phosphorylase From Thermus Thermophilus
pdb|1ODJ|D Chain D, Purine Nucleoside Phosphorylase From Thermus Thermophilus
pdb|1ODJ|C Chain C, Purine Nucleoside Phosphorylase From Thermus Thermophilus
pdb|1ODJ|B Chain B, Purine Nucleoside Phosphorylase From Thermus Thermophilus
pdb|1ODJ|A Chain A, Purine Nucleoside Phosphorylase From Thermus Thermophilus
pdb|1ODI|F Chain F, Purine Nucleoside Phosphorylase From Thermus Thermophilus
pdb|1ODI|E Chain E, Purine Nucleoside Phosphorylase From Thermus Thermophilus
pdb|1ODI|D Chain D, Purine Nucleoside Phosphorylase From Thermus Thermophilus
pdb|1ODI|C Chain C, Purine Nucleoside Phosphorylase From Thermus Thermophilus
pdb|1ODI|B Chain B, Purine Nucleoside Phosphorylase From Thermus Thermophilus
pdb|1ODI|A Chain A, Purine Nucleoside Phosphorylase From Thermus Thermophilus
gb|AAS81412.1| purine nucleoside phosphorylase [Thermus thermophilus HB27]
dbj|BAD71258.1| purine nucleoside phosphorylase [Thermus thermophilus HB8]
Length = 235
Score = 108 bits (270), Expect = 1e-22
Identities = 72/230 (31%), Positives = 120/230 (51%), Gaps = 10/230 (4%)
Query: 14 GKLPKVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGA 73
G + + ++ GDP RA+ +++ R Y G++K + V + G+G A
Sbjct: 11 GDVAERVLLPGDPGRAEWIAKTFLQNPRRYNDHRGLWGYTGLYKGVPVSVQTTGMGTPSA 70
Query: 74 SVCFEELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVS-EGLVPLGYPAISD 132
++ EEL++ G ++R GTAG+ G L++A GAV DG + + L Y + D
Sbjct: 71 AIVVEELVRLGARVLVRVGTAGAASSDLAPGELIVAQGAVPLDGTTRQYLEGRPYAPVPD 130
Query: 133 HEVVGALIESAKSNGLSNEQYGVGIITTVGHFFDGPLGNHNKLWARSKVLAIEMEASILF 192
EV AL A++ G + VG++ + F+ + WAR VLA EMEAS LF
Sbjct: 131 PEVFRALWRRAEALGYPHR---VGLVASEDAFY-ATTPEEARAWARYGVLAFEMEASALF 186
Query: 193 IVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDA 242
++ +RG+R GA + + N I + E++ +V+ +G +M+EVAL+A
Sbjct: 187 LLGRMRGVRTGAILAVSNRIGDPELAPP-----EVLQEGVRRMVEVALEA 231
>gi|12518708|gb|AAG59027.1| uridine phosphorylase [Escherichia coli
O157:H7 EDL933]
dbj|BAB38184.1| uridine phosphorylase [Escherichia coli O157:H7]
ref|NP_312788.1| uridine phosphorylase [Escherichia coli O157:H7]
pir||G86070 uridine phosphorylase [imported] - Escherichia coli (strain
O157:H7, substrain EDL933)
pir||A98224 uridine phosphorylase [imported] - Escherichia coli (strain
O157:H7, substrain RIMD 0509952)
ref|NP_290463.1| uridine phosphorylase [Escherichia coli O157:H7 EDL933]
Length = 253
Score = 108 bits (270), Expect = 1e-22
Identities = 72/241 (29%), Positives = 121/241 (49%), Gaps = 22/241 (9%)
Query: 19 VCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCFE 78
+ +V GDP+R + ++ +L + REF ++ ++V S GIGG S+ E
Sbjct: 21 LAIVPGDPDRVEKIAALMDKPVKLA-SHREFTTWRAELDGKPVIVCSTGIGGPSTSIAVE 79
Query: 79 ELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVGA 138
EL Q G+ T +R GT G+ P G +++ T +VR DG S PL +PA++D E A
Sbjct: 80 ELAQLGIRTFLRIGTTGAIQPHINVGDVLVTTASVRLDGASLHFAPLEFPAVADFECTTA 139
Query: 139 LIESAKSNGLSNEQYGVGIITTVGHF---------FDGPLGNHNK----LWARSKVLAIE 185
L+E+AKS G + VG+ + F + G + H K W V+ E
Sbjct: 140 LVEAAKSIGATTH---VGVTASSDTFYPGQERYDTYSGRVVRHFKGSMEEWQAMGVMNYE 196
Query: 186 MEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAKR 245
ME++ L + + +G+RAG + ++EI PN + + Q + +++ ++AA+R
Sbjct: 197 MESATLLTMCASQGLRAGMVAGVIVNRTQQEI-----PNAETMKQTESQAVKIVVEAARR 251
Query: 246 L 246
L
Sbjct: 252 L 252
>gi|53692531|ref|ZP_00122931.2| COG2820: Uridine phosphorylase
[Haemophilus somnus 129PT]
Length = 252
Score = 108 bits (270), Expect = 1e-22
Identities = 73/242 (30%), Positives = 115/242 (47%), Gaps = 21/242 (8%)
Query: 18 KVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCF 77
++ +V G P R + ++ + + + + REF + G ++V S GIGG S+
Sbjct: 18 ELAIVPGAPERVERIA-RLLDNPKFLASTREFTSWLGYIGQKAVVVCSTGIGGPSVSIAV 76
Query: 78 EELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVG 137
EEL Q G+ T +R GT G+ P G ++I TGAVR DG S PL YPA++ + +
Sbjct: 77 EELAQLGIRTFLRIGTTGAIQPHINVGDILITTGAVRLDGASRHFAPLEYPAVAHFDCMS 136
Query: 138 ALIESAKSNGLSNEQYGVGIITTVGHF---------FDGPLGNHN----KLWARSKVLAI 184
AL + + + +GI + F + G + H K W V+
Sbjct: 137 ALHRAVSNE--PRDSVHIGITASSDTFYPGQERYDTYSGKVCRHYQGSLKQWQALNVMNY 194
Query: 185 EMEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAK 244
EME++ LF + S G+RAG + ++EI PN +HQ K +E+A+ AA
Sbjct: 195 EMESATLFTMCSALGLRAGMVSGVIVNRTQQEI-----PNEQTIHQTEQKAIEIAIKAAT 249
Query: 245 RL 246
L
Sbjct: 250 LL 251
>gi|43242|emb|CAA33724.1| unnamed protein product [Escherichia coli]
gb|AAC76834.1| uridine phosphorylase [Escherichia coli K12]
gb|AAA67626.1| uridine phosphorylase [Escherichia coli]
pdb|1T0U|B Chain B, Crystal Structure Of E.Coli Uridine Phosphorylase At 2.2 A
Resolution (Type-A Native)
pdb|1T0U|A Chain A, Crystal Structure Of E.Coli Uridine Phosphorylase At 2.2 A
Resolution (Type-A Native)
pdb|1RXY|B Chain B, E. Coli Uridine Phosphorylase: Type-B Native
pdb|1RXY|A Chain A, E. Coli Uridine Phosphorylase: Type-B Native
pdb|1RXU|R Chain R, E. Coli Uridine Phosphorylase: Thymidine Phosphate Complex
pdb|1RXU|Q Chain Q, E. Coli Uridine Phosphorylase: Thymidine Phosphate Complex
pdb|1RXU|P Chain P, E. Coli Uridine Phosphorylase: Thymidine Phosphate Complex
pdb|1RXU|O Chain O, E. Coli Uridine Phosphorylase: Thymidine Phosphate Complex
pdb|1RXU|N Chain N, E. Coli Uridine Phosphorylase: Thymidine Phosphate Complex
pdb|1RXU|M Chain M, E. Coli Uridine Phosphorylase: Thymidine Phosphate Complex
pdb|1RXU|L Chain L, E. Coli Uridine Phosphorylase: Thymidine Phosphate Complex
pdb|1RXU|K Chain K, E. Coli Uridine Phosphorylase: Thymidine Phosphate Complex
pdb|1RXU|J Chain J, E. Coli Uridine Phosphorylase: Thymidine Phosphate Complex
pdb|1RXU|I Chain I, E. Coli Uridine Phosphorylase: Thymidine Phosphate Complex
pdb|1RXU|H Chain H, E. Coli Uridine Phosphorylase: Thymidine Phosphate Complex
pdb|1RXU|G Chain G, E. Coli Uridine Phosphorylase: Thymidine Phosphate Complex
pdb|1RXU|F Chain F, E. Coli Uridine Phosphorylase: Thymidine Phosphate Complex
pdb|1RXU|E Chain E, E. Coli Uridine Phosphorylase: Thymidine Phosphate Complex
pdb|1RXU|D Chain D, E. Coli Uridine Phosphorylase: Thymidine Phosphate Complex
pdb|1RXU|C Chain C, E. Coli Uridine Phosphorylase: Thymidine Phosphate Complex
pdb|1RXU|B Chain B, E. Coli Uridine Phosphorylase: Thymidine Phosphate Complex
pdb|1RXU|A Chain A, E. Coli Uridine Phosphorylase: Thymidine Phosphate Complex
pdb|1RXS|OO Chain o, E. Coli Uridine Phosphorylase: 2'-Deoxyuridine Phosphate
Complex
pdb|1RXS|O Chain O, E. Coli Uridine Phosphorylase: 2'-Deoxyuridine Phosphate
Complex
pdb|1RXS|Q Chain Q, E. Coli Uridine Phosphorylase: 2'-Deoxyuridine Phosphate
Complex
pdb|1RXS|N Chain N, E. Coli Uridine Phosphorylase: 2'-Deoxyuridine Phosphate
Complex
pdb|1RXS|MM Chain m, E. Coli Uridine Phosphorylase: 2'-Deoxyuridine Phosphate
Complex
pdb|1RXS|M Chain M, E. Coli Uridine Phosphorylase: 2'-Deoxyuridine Phosphate
Complex
pdb|1RXS|LL Chain l, E. Coli Uridine Phosphorylase: 2'-Deoxyuridine Phosphate
Complex
pdb|1RXS|L Chain L, E. Coli Uridine Phosphorylase: 2'-Deoxyuridine Phosphate
Complex
pdb|1RXS|KK Chain k, E. Coli Uridine Phosphorylase: 2'-Deoxyuridine Phosphate
Complex
pdb|1RXS|K Chain K, E. Coli Uridine Phosphorylase: 2'-Deoxyuridine Phosphate
Complex
pdb|1RXS|JJ Chain j, E. Coli Uridine Phosphorylase: 2'-Deoxyuridine Phosphate
Complex
pdb|1RXS|J Chain J, E. Coli Uridine Phosphorylase: 2'-Deoxyuridine Phosphate
Complex
pdb|1RXS|II Chain i, E. Coli Uridine Phosphorylase: 2'-Deoxyuridine Phosphate
Complex
pdb|1RXS|I Chain I, E. Coli Uridine Phosphorylase: 2'-Deoxyuridine Phosphate
Complex
pdb|1RXS|HH Chain h, E. Coli Uridine Phosphorylase: 2'-Deoxyuridine Phosphate
Complex
pdb|1RXS|H Chain H, E. Coli Uridine Phosphorylase: 2'-Deoxyuridine Phosphate
Complex
pdb|1RXS|P Chain P, E. Coli Uridine Phosphorylase: 2'-Deoxyuridine Phosphate
Complex
pdb|1RXS|G Chain G, E. Coli Uridine Phosphorylase: 2'-Deoxyuridine Phosphate
Complex
pdb|1RXS|R Chain R, E. Coli Uridine Phosphorylase: 2'-Deoxyuridine Phosphate
Complex
pdb|1RXS|F Chain F, E. Coli Uridine Phosphorylase: 2'-Deoxyuridine Phosphate
Complex
pdb|1RXS|EE Chain e, E. Coli Uridine Phosphorylase: 2'-Deoxyuridine Phosphate
Complex
pdb|1RXS|E Chain E, E. Coli Uridine Phosphorylase: 2'-Deoxyuridine Phosphate
Complex
pdb|1RXS|DD Chain d, E. Coli Uridine Phosphorylase: 2'-Deoxyuridine Phosphate
Complex
pdb|1RXS|D Chain D, E. Coli Uridine Phosphorylase: 2'-Deoxyuridine Phosphate
Complex
pdb|1RXS|CC Chain c, E. Coli Uridine Phosphorylase: 2'-Deoxyuridine Phosphate
Complex
pdb|1RXS|C Chain C, E. Coli Uridine Phosphorylase: 2'-Deoxyuridine Phosphate
Complex
pdb|1RXS|BB Chain b, E. Coli Uridine Phosphorylase: 2'-Deoxyuridine Phosphate
Complex
pdb|1RXS|B Chain B, E. Coli Uridine Phosphorylase: 2'-Deoxyuridine Phosphate
Complex
pdb|1RXS|AA Chain a, E. Coli Uridine Phosphorylase: 2'-Deoxyuridine Phosphate
Complex
pdb|1RXS|A Chain A, E. Coli Uridine Phosphorylase: 2'-Deoxyuridine Phosphate
Complex
pdb|1RXC|L Chain L, E. Coli Uridine Phosphorylase: 5-Fluorouracil Ribose-1-
Phosphate Complex
pdb|1RXC|K Chain K, E. Coli Uridine Phosphorylase: 5-Fluorouracil Ribose-1-
Phosphate Complex
pdb|1RXC|J Chain J, E. Coli Uridine Phosphorylase: 5-Fluorouracil Ribose-1-
Phosphate Complex
pdb|1RXC|I Chain I, E. Coli Uridine Phosphorylase: 5-Fluorouracil Ribose-1-
Phosphate Complex
pdb|1RXC|H Chain H, E. Coli Uridine Phosphorylase: 5-Fluorouracil Ribose-1-
Phosphate Complex
pdb|1RXC|G Chain G, E. Coli Uridine Phosphorylase: 5-Fluorouracil Ribose-1-
Phosphate Complex
pdb|1RXC|F Chain F, E. Coli Uridine Phosphorylase: 5-Fluorouracil Ribose-1-
Phosphate Complex
pdb|1RXC|E Chain E, E. Coli Uridine Phosphorylase: 5-Fluorouracil Ribose-1-
Phosphate Complex
pdb|1RXC|D Chain D, E. Coli Uridine Phosphorylase: 5-Fluorouracil Ribose-1-
Phosphate Complex
pdb|1RXC|C Chain C, E. Coli Uridine Phosphorylase: 5-Fluorouracil Ribose-1-
Phosphate Complex
pdb|1RXC|B Chain B, E. Coli Uridine Phosphorylase: 5-Fluorouracil Ribose-1-
Phosphate Complex
pdb|1RXC|A Chain A, E. Coli Uridine Phosphorylase: 5-Fluorouracil Ribose-1-
Phosphate Complex
ref|NP_418275.1| uridine phosphorylase [Escherichia coli K12]
pir||S05491 uridine phosphorylase (EC 2.4.2.3) [validated] - Escherichia coli
(strain K-12)
sp|P12758|UDP_ECOLI Uridine phosphorylase (UrdPase) (UPase)
pdb|1K3F|F Chain F, Uridine Phosphorylase From E. Coli, Refined In The
Monoclinic Crystal Lattice
pdb|1K3F|E Chain E, Uridine Phosphorylase From E. Coli, Refined In The
Monoclinic Crystal Lattice
pdb|1K3F|D Chain D, Uridine Phosphorylase From E. Coli, Refined In The
Monoclinic Crystal Lattice
pdb|1K3F|C Chain C, Uridine Phosphorylase From E. Coli, Refined In The
Monoclinic Crystal Lattice
pdb|1K3F|B Chain B, Uridine Phosphorylase From E. Coli, Refined In The
Monoclinic Crystal Lattice
pdb|1K3F|A Chain A, Uridine Phosphorylase From E. Coli, Refined In The
Monoclinic Crystal Lattice
Length = 253
Score = 107 bits (268), Expect = 2e-22
Identities = 72/241 (29%), Positives = 120/241 (48%), Gaps = 22/241 (9%)
Query: 19 VCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCFE 78
+ +V GDP+R + ++ +L + REF ++ ++V S GIGG S+ E
Sbjct: 21 LAIVPGDPDRVEKIAALMDKPVKLA-SHREFTTWRAELDGKPVIVCSTGIGGPSTSIAVE 79
Query: 79 ELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVGA 138
EL Q G+ T +R GT G+ P G +++ T +VR DG S PL +PA++D E A
Sbjct: 80 ELAQLGIRTFLRIGTTGAIQPHINVGDVLVTTASVRLDGASLHFAPLEFPAVADFECTTA 139
Query: 139 LIESAKSNGLSNEQYGVGIITTVGHF---------FDGPLGNHNK----LWARSKVLAIE 185
L+E+AKS G + VG+ + F + G + H K W V+ E
Sbjct: 140 LVEAAKSIGATTH---VGVTASSDTFYPGQERYDTYSGRVVRHFKGSMEEWQAMGVMNYE 196
Query: 186 MEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAKR 245
ME++ L + + +G+RAG + ++EI PN + + Q +++ ++AA+R
Sbjct: 197 MESATLLTMCASQGLRAGMVAGVIVNRTQQEI-----PNAETMKQTESHAVKIVVEAARR 251
Query: 246 L 246
L
Sbjct: 252 L 252
>gi|56480449|ref|NP_709637.2| uridine phosphorylase [Shigella
flexneri 2a str. 301]
gb|AAN45344.2| uridine phosphorylase [Shigella flexneri 2a str. 301]
ref|NP_839043.1| uridine phosphorylase [Shigella flexneri 2a str. 2457T]
gb|AAP18854.1| uridine phosphorylase [Shigella flexneri 2a str. 2457T]
Length = 253
Score = 107 bits (268), Expect = 2e-22
Identities = 72/241 (29%), Positives = 120/241 (48%), Gaps = 22/241 (9%)
Query: 19 VCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCFE 78
+ +V GDP+R + ++ +L + REF ++ ++V S GIGG S+ E
Sbjct: 21 LAIVPGDPDRVEKIAALMDKPVKLA-SHREFTTWRAELDGKPVIVCSTGIGGPSTSIAVE 79
Query: 79 ELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVGA 138
EL Q G+ T +R GT G+ P G +++ T +VR DG S PL +PA++D E A
Sbjct: 80 ELAQLGIRTFLRIGTTGAIQPHINVGDVLVTTASVRLDGASLHFAPLEFPAVADFECTTA 139
Query: 139 LIESAKSNGLSNEQYGVGIITTVGHF---------FDGPLGNHNK----LWARSKVLAIE 185
L+E+AKS G + VG+ + F + G + H K W V+ E
Sbjct: 140 LVEAAKSIGATTH---VGVTVSSDTFYPGQERYDTYSGRVVRHFKGSMEEWQAMGVMNYE 196
Query: 186 MEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAKR 245
ME++ L + + +G+RAG + ++EI PN + + Q +++ ++AA+R
Sbjct: 197 MESATLLTMCASQGLRAGMVAGVIVNRTQQEI-----PNAETMKQTESHAVKIVVEAARR 251
Query: 246 L 246
L
Sbjct: 252 L 252
>gi|32030781|ref|ZP_00133549.1| COG2820: Uridine phosphorylase
[Haemophilus somnus 2336]
Length = 252
Score = 106 bits (264), Expect = 6e-22
Identities = 72/242 (29%), Positives = 113/242 (45%), Gaps = 21/242 (8%)
Query: 18 KVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCF 77
++ +V G P R + ++ + + + + REF + G ++V S GIGG S+
Sbjct: 18 ELAIVPGAPERVERIA-RLLDNPKFLASTREFTSWLGYIDQKAVVVCSTGIGGPSVSIAV 76
Query: 78 EELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVG 137
EEL Q G+ T +R GT G+ P G ++I TGAVR DG S PL YPA++ + +
Sbjct: 77 EELAQLGIRTFLRIGTTGAIQPHINVGDILITTGAVRLDGASRHFAPLEYPAVAHFDCMS 136
Query: 138 ALIESAKSNGLSNEQYGVGIITTVGHF---------FDGPLGNHN----KLWARSKVLAI 184
AL + + + +GI + F + G + H K W V+
Sbjct: 137 ALHHAVSNE--PGDSVHIGITASSDTFYPGQERYDTYSGKVCRHYQGSLKQWQALNVMNY 194
Query: 185 EMEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAK 244
EME++ LF + S G+RAG + ++EI PN +HQ K +E + AA
Sbjct: 195 EMESATLFTMCSALGLRAGMVSGVIVNRTQQEI-----PNEQTIHQTEQKAIEAVIKAAT 249
Query: 245 RL 246
L
Sbjct: 250 LL 251
>gi|46106655|ref|ZP_00187586.2| COG0813: Purine-nucleoside
phosphorylase [Rubrobacter xylanophilus DSM 9941]
Length = 232
Score = 105 bits (262), Expect = 1e-21
Identities = 72/235 (30%), Positives = 118/235 (49%), Gaps = 9/235 (3%)
Query: 14 GKLPKVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGA 73
G + ++ GDP RA+ ++ F LV R Y G ++ + V + G+G A
Sbjct: 6 GDFAESVLLPGDPLRAEYIARTFFESPRLVTRERGMLGYTGSYRGRPVSVQATGMGCPSA 65
Query: 74 SVCFEELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLV-PLGYPAISD 132
++ EEL+Q G ++R GT G + + G LV+AT A DG L + Y +
Sbjct: 66 AIVVEELVQLGARNLLRVGTCGGYHRELQLGDLVVATAAAPQDGTVSSLTRGVPYAPAAH 125
Query: 133 HEVVGALIESAKSNGLSNEQYGVGIITTVGHFFDGPLGNHNKLWARSKVLAIEMEASILF 192
+VV A +A+ +G + +G + + F+D P+ + LW+R VLA+EMEA+ +F
Sbjct: 126 FDVVHAAYHAAERSG---RRTFMGPVVSSDLFYD-PVEDPAGLWSRLGVLAVEMEAAAIF 181
Query: 193 IVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAKRLS 247
+A++RG RAG + + + I E + E R V M+E+ALD L+
Sbjct: 182 TIAAMRGARAGCLLTVSDTIGEEVVRISDEDLRAAVD----NMVELALDTLHGLN 232
>gi|57159738|dbj|BAD85668.1| uridine phosphorylase [Thermococcus
kodakaraensis KOD1]
ref|YP_183892.1| uridine phosphorylase [Thermococcus kodakaraensis KOD1]
Length = 277
Score = 105 bits (261), Expect = 1e-21
Identities = 71/205 (34%), Positives = 108/205 (52%), Gaps = 17/205 (8%)
Query: 14 GKLPKVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGA 73
G + + ++ GDP R +S E+ RE+ + G +K + V S GIGG
Sbjct: 26 GDVARYVLLPGDPERVPKISSLWDEAREIAFH-REYRTHTGKYKGVPISVTSTGIGGPST 84
Query: 74 SVCFEELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDH 133
++ EEL G T IR G+ G+ P G L+IA AVR +G S+ V + YPA++D
Sbjct: 85 AIAIEELAAIGADTFIRVGSTGAIQPGIEIGDLIIAKAAVRLEGTSKQYVRVEYPAVADL 144
Query: 134 EVVGALIESAKSNGLSNEQYGVGIITTVGHFFDGP----LGNHNKLWAR--------SKV 181
EV ALIE+A+S G+ +Y +GI + F+ G L + +AR ++V
Sbjct: 145 EVTLALIEAAESLGV---RYHIGITASTDSFYLGQGRPGLNGYFPSFARNLVDDLRQARV 201
Query: 182 LAIEMEASILFIVASLRGIRAGACV 206
EMEA+ L+ +A++ G+RAG CV
Sbjct: 202 TNFEMEAATLYTLANIYGLRAG-CV 225
>gi|15603437|ref|NP_246511.1| Udp [Pasteurella multocida subsp.
multocida str. Pm70]
gb|AAK03656.1| Udp [Pasteurella multocida subsp. multocida str. Pm70]
Length = 252
Score = 104 bits (260), Expect = 2e-21
Identities = 74/241 (30%), Positives = 111/241 (45%), Gaps = 21/241 (8%)
Query: 19 VCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCFE 78
+ + G P R + ++ K + + + REF + G D ++V S GIGG S+ E
Sbjct: 19 LAITPGAPERVEKIA-KLLDRPKFLASTREFTSWLGYIGDKAVVVCSTGIGGPSVSIAVE 77
Query: 79 ELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVGA 138
EL Q GV T +R GT G+ P G +++ TGAVR DG S P+ YPA+++ E A
Sbjct: 78 ELAQLGVRTFLRIGTTGAIQPHINVGDILVTTGAVRLDGASLHFAPMEYPAVANFECTNA 137
Query: 139 LIESAKSNGLSNEQYGVGIITTVGHFFDGP-------------LGNHNKLWARSKVLAIE 185
L ++A L+N++ VGI F+ G K W V+ E
Sbjct: 138 LYKAATE--LANQKVYVGITAASDTFYPGQERYDTYSGKVYRHFQGSLKQWQDLNVMNFE 195
Query: 186 MEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAKR 245
ME++ LF + S G+RAG ++EI PN V +E+ + AA
Sbjct: 196 MESATLFTMCSALGLRAGMVAGAIVNRTQQEI-----PNEAAVKDIEKNAVEIVVKAAAY 250
Query: 246 L 246
L
Sbjct: 251 L 251
>gi|2181932|emb|CAA73838.1| uridine phosphorylase [Klebsiella
aerogenes]
sp|O08444|UDP_KLEAE Uridine phosphorylase (UrdPase) (UPase)
pir||T46830 uridine phosphorylase (EC 2.4.2.3) [validated] - Klebsiella
aerogenes
Length = 253
Score = 104 bits (260), Expect = 2e-21
Identities = 68/241 (28%), Positives = 116/241 (47%), Gaps = 22/241 (9%)
Query: 19 VCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCFE 78
+ +V GDP R + ++ +L + REF ++ ++V S GIGG S+ E
Sbjct: 21 LAIVPGDPERVEKIAALMDKPVKLA-SHREFTSWRAELDGKPVIVCSTGIGGPSTSIAVE 79
Query: 79 ELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVGA 138
EL GV T +R GT G+ P G +++ TG+VR DG S P+ +PA++D A
Sbjct: 80 ELAHVGVRTFLRIGTTGAIQPHINVGDVLVTTGSVRLDGASLHFAPMEFPAVADFACTTA 139
Query: 139 LIESAKSNGLSNEQYGVGIITTVGHFFDGP-------------LGNHNKLWARSKVLAIE 185
L+E+AKS G + +G+ + F+ G + W V+ E
Sbjct: 140 LVEAAKSIGATTH---IGVTASSDTFYPGQERYDTFSGRVVSRFKGSMEEWQAMGVMNYE 196
Query: 186 MEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAKR 245
ME++ L + + +G+RAG + ++EI PN + + Q +++ ++AA+R
Sbjct: 197 MESATLLTMCASQGLRAGMVAGVIVNRTQQEI-----PNAETMKQTESHAVKIVVEAARR 251
Query: 246 L 246
L
Sbjct: 252 L 252
>gi|56415822|ref|YP_152897.1| uridine phosphorylase [Salmonella
enterica subsp. enterica serovar Paratypi A str. ATCC
9150]
gb|AAV79585.1| uridine phosphorylase [Salmonella enterica subsp. enterica serovar
Paratypi A str. ATCC 9150]
ref|NP_806997.1| uridine phosphorylase [Salmonella enterica subsp. enterica serovar
Typhi Ty2]
ref|NP_457783.1| uridine phosphorylase [Salmonella enterica subsp. enterica serovar
Typhi str. CT18]
gb|AAL22812.1| uridine phosphorylase [Salmonella typhimurium LT2]
emb|CAA74658.2| uridine phosphorylase [Salmonella typhimurium]
gb|AAO70857.1| uridine phosphorylase [Salmonella enterica subsp. enterica serovar
Typhi Ty2]
emb|CAD07924.1| uridine phosphorylase [Salmonella enterica subsp. enterica serovar
Typhi]
gb|AAF33424.1| S. typhimurium uridine phosphorylase (UDP) (SP:O33808); contains
similarity to Pfam family PF01048 (Phosphorylase
family), score=375.0, E=7.6e-109, N=1 [Salmonella
typhimurium LT2]
sp|P0A1F7|UDP_SALTI Uridine phosphorylase (UrdPase) (UPase)
sp|P0A1F6|UDP_SALTY Uridine phosphorylase (UrdPase) (UPase)
ref|NP_462853.1| uridine phosphorylase [Salmonella typhimurium LT2]
pir||AF0916 uridine phosphorylase (EC 2.4.2.3) [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
pdb|1RYZ|F Chain F, Uridine Phosphorylase From Salmonella Typhimurium. Crystal
Structure At 2.9 A Resolution
pdb|1RYZ|E Chain E, Uridine Phosphorylase From Salmonella Typhimurium. Crystal
Structure At 2.9 A Resolution
pdb|1RYZ|D Chain D, Uridine Phosphorylase From Salmonella Typhimurium. Crystal
Structure At 2.9 A Resolution
pdb|1RYZ|C Chain C, Uridine Phosphorylase From Salmonella Typhimurium. Crystal
Structure At 2.9 A Resolution
pdb|1RYZ|B Chain B, Uridine Phosphorylase From Salmonella Typhimurium. Crystal
Structure At 2.9 A Resolution
pdb|1RYZ|A Chain A, Uridine Phosphorylase From Salmonella Typhimurium. Crystal
Structure At 2.9 A Resolution
Length = 253
Score = 104 bits (259), Expect = 2e-21
Identities = 68/242 (28%), Positives = 117/242 (48%), Gaps = 22/242 (9%)
Query: 18 KVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCF 77
++ +V GDP R + ++ +L + REF ++ ++V S GIGG S+
Sbjct: 20 QLAIVPGDPERVEKIAALMDKPVKLA-SHREFTSWRAELDGKAVIVCSTGIGGPSTSIAV 78
Query: 78 EELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVG 137
EEL Q G+ T +R GT G+ P G +++ T +VR DG S P+ +PA++D
Sbjct: 79 EELAQLGIRTFLRIGTTGAIQPHINVGDVLVTTASVRLDGASLHFAPMEFPAVADFACTT 138
Query: 138 ALIESAKSNGLSNEQYGVGIITTVGHFFDGP-------------LGNHNKLWARSKVLAI 184
AL+E+AKS G + VG+ + F+ G + W V+
Sbjct: 139 ALVEAAKSIGATTH---VGVTASSDTFYPGQERYDTYSGRVVRRFKGSMEEWQAMGVMNY 195
Query: 185 EMEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAK 244
EME++ L + + +G+RAG + ++EI PN + + Q +++ ++AA+
Sbjct: 196 EMESATLLTMCASQGLRAGMVAGVIVNRTQQEI-----PNAETMKQTESHAVKIVVEAAR 250
Query: 245 RL 246
RL
Sbjct: 251 RL 252
>gi|24375779|ref|NP_719822.1| uridine phosphorylase, putative
[Shewanella oneidensis MR-1]
gb|AAN57266.1| uridine phosphorylase, putative [Shewanella oneidensis MR-1]
Length = 241
Score = 103 bits (258), Expect = 3e-21
Identities = 72/243 (29%), Positives = 115/243 (46%), Gaps = 8/243 (3%)
Query: 3 IKVTPICLLPIGKLPKVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEML 62
+ + P L+ ++ + VV G+PNR + H E + REF +G + DT +
Sbjct: 1 MSIQPHILVAPHQVSEKAVVCGEPNRVNRIVA-HLTDVESLADNREFRLMRGRYGDTIVT 59
Query: 63 VMSHGIGGGGASVCFEELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGL 122
V S GIG A + EEL Q GV +IR G+AG+ P+ G ++IA AVR DG S
Sbjct: 60 VCSTGIGAPSAIIALEELYQCGVKQLIRIGSAGALQPQIAIGDVIIAEAAVRDDGGSASY 119
Query: 123 VPLGYPAISDHEVVGALIESAKSNGLSNEQYGVGIITTVGHFFDGPLGNHNKLWARSKVL 182
V G+PA ++H +VG L + + G++ + F+ + W R VL
Sbjct: 120 VKPGFPAYANHRLVGKLQAYCAQHHICAHS---GVVRSHDSFYTDQEQDLCHYWHRQGVL 176
Query: 183 AIEMEASILFIVASLRGIRAGACVNIDNYIFEREIS---EKYEPNRDVVHQGTFKMLEVA 239
+ME + LF V LR + A + + +F++++ Y + QG + A
Sbjct: 177 GADMETAALFTVGRLRQLEVAAILT-NVVLFDQDVKAGVNDYVASSKASAQGEQHAILAA 235
Query: 240 LDA 242
L+A
Sbjct: 236 LNA 238
>gi|21730872|pdb|1LX7|B Chain B, Structure Of E. Coli Uridine
Phosphorylase At 2.0a
pdb|1LX7|A Chain A, Structure Of E. Coli Uridine Phosphorylase At 2.0a
Length = 253
Score = 103 bits (258), Expect = 3e-21
Identities = 69/241 (28%), Positives = 114/241 (46%), Gaps = 22/241 (9%)
Query: 19 VCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCFE 78
+ +V GDP+R + ++ +L + REF ++ ++V S GIGG S+ E
Sbjct: 21 LAIVPGDPDRVEKIAALXDKPVKLA-SHREFTTWRAELDGKPVIVCSTGIGGPSTSIAVE 79
Query: 79 ELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVGA 138
EL Q G+ T +R GT G+ P G +++ T +VR DG S PL +PA++D E A
Sbjct: 80 ELAQLGIRTFLRIGTTGAIQPHINVGDVLVTTASVRLDGASLHFAPLEFPAVADFECTTA 139
Query: 139 LIESAKSNGLSNEQYGVGIITTVGHFFDGP-------------LGNHNKLWARSKVLAIE 185
L+E+AKS G + VG+ + F+ G + W V E
Sbjct: 140 LVEAAKSIGATTH---VGVTASSDTFYPGQERYDTYSGRVVRHFKGSXEEWQAXGVXNYE 196
Query: 186 MEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAKR 245
E++ L + +G+RAG + ++EI PN + Q +++ ++AA+R
Sbjct: 197 XESATLLTXCASQGLRAGXVAGVIVNRTQQEI-----PNAETXKQTESHAVKIVVEAARR 251
Query: 246 L 246
L
Sbjct: 252 L 252
>gi|2168160|emb|CAA73795.1| uridine phosphorylase [Salmonella
typhimurium]
Length = 253
Score = 103 bits (257), Expect = 4e-21
Identities = 68/242 (28%), Positives = 116/242 (47%), Gaps = 22/242 (9%)
Query: 18 KVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCF 77
++ +V GDP R + ++ +L + REF ++ ++V S GIGG S+
Sbjct: 20 QLAIVPGDPERVEKIAALMDKPVKLA-SHREFTSWRAELDGKAVIVCSTGIGGPSTSIAV 78
Query: 78 EELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVG 137
EEL Q G+ T +R GT G+ P G +++ T +VR DG S P+ +PA++D
Sbjct: 79 EELAQLGIRTFLRIGTTGAIQPHINVGDVLVTTASVRLDGASLHFAPMEFPAVADFACTT 138
Query: 138 ALIESAKSNGLSNEQYGVGIITTVGHFFDGP-------------LGNHNKLWARSKVLAI 184
AL+E+AKS G + VG+ + F+ G + W V+
Sbjct: 139 ALVEAAKSIGATTH---VGVTASSDTFYPGQERYDTYSGRVVRRFKGSMEEWQAMGVMNY 195
Query: 185 EMEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAK 244
EME+ L + + +G+RAG + ++EI PN + + Q +++ ++AA+
Sbjct: 196 EMESRTLLTMCASQGLRAGMVAGVIVNRTQQEI-----PNAETMKQTESHAVKIVVEAAR 250
Query: 245 RL 246
RL
Sbjct: 251 RL 252
>gi|26250592|ref|NP_756632.1| Uridine phosphorylase [Escherichia
coli CFT073]
gb|AAN83206.1| Uridine phosphorylase [Escherichia coli CFT073]
Length = 217
Score = 102 bits (253), Expect = 1e-20
Identities = 66/213 (30%), Positives = 106/213 (48%), Gaps = 21/213 (9%)
Query: 47 REFHCYKGMWKDTEMLVMSHGIGGGGASVCFEELIQAGVTTIIRAGTAGSFDPRYREGSL 106
REF ++ ++V S GIGG S+ EEL Q G+ T +R GT G+ P G +
Sbjct: 11 REFTTWRAELDGKPVIVCSTGIGGPSTSIAVEELAQLGIRTFLRIGTTGAIQPHINVGDV 70
Query: 107 VIATGAVRSDGVSEGLVPLGYPAISDHEVVGALIESAKSNGLSNEQYGVGIITTVGHF-- 164
++ T +VR DG S PL +PA++D E AL+E+AKS G + VG+ + F
Sbjct: 71 LVTTASVRLDGASLHFAPLEFPAVADFECTTALVEAAKSIGATAH---VGVTASSDTFYP 127
Query: 165 -------FDGPLGNHNK----LWARSKVLAIEMEASILFIVASLRGIRAGACVNIDNYIF 213
+ G + H K W V+ EME++ L + + +G+RAG +
Sbjct: 128 GQERYDTYSGRVVRHFKGSMEEWQAMGVMNYEMESATLLTMCASQGLRAGMVAGVIVNRT 187
Query: 214 EREISEKYEPNRDVVHQGTFKMLEVALDAAKRL 246
++EI PN + + Q +++ ++AA+RL
Sbjct: 188 QQEI-----PNAETMKQTESHAVKIVVEAARRL 215
>gi|56525321|emb|CAH75280.1| uridine phosphorylase, putative
[Plasmodium chabaudi]
Length = 247
Score = 102 bits (253), Expect = 1e-20
Identities = 62/195 (31%), Positives = 105/195 (53%), Gaps = 10/195 (5%)
Query: 19 VCVVVGDPNRA---KLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASV 75
V +VVGDP R KL+ + + + RE+ + +K + L +SHG+G GA++
Sbjct: 18 VALVVGDPGRVDKIKLMCDSYIELAHN----REYKSIECTYKGAKFLCVSHGVGSAGAAI 73
Query: 76 CFEELIQAGVTTIIRAGTAGSFDPRY-REGSLVIATGAVRSDGVSEGLVPLGYPAISDHE 134
CFEEL+ GV IIRAG+ GS P Y + G L I AVR D V+ ++ YPA+ D E
Sbjct: 74 CFEELMNIGVKAIIRAGSCGSLQPGYIKRGDLCICNAAVREDRVTHLMIYPDYPAVGDFE 133
Query: 135 VVGALIESAKSNGLSNEQYGVGIITTVGHFFDGPLGNHNKLWARSKVLAIEMEASILFIV 194
V L++ A+ + G+ + + + ++ L + + ++++ V +EME + L ++
Sbjct: 134 VYDVLLKCAEELEV-KAHTGISLSSDL-YYPKDILPSRLEDYSKANVAVVEMELATLMVM 191
Query: 195 ASLRGIRAGACVNID 209
L G++ G +D
Sbjct: 192 GGLSGVKTGGIFIVD 206
>gi|54308414|ref|YP_129434.1| Putative uridine phosphorylase
[Photobacterium profundum SS9]
emb|CAG19632.1| Putative uridine phosphorylase [Photobacterium profundum]
Length = 255
Score = 101 bits (252), Expect = 2e-20
Identities = 64/245 (26%), Positives = 119/245 (48%), Gaps = 22/245 (8%)
Query: 18 KVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCF 77
++ ++ GDP R + ++ E + + RE+ ++G+ ++V S GIGG S+
Sbjct: 20 ELAIIPGDPARVEKIASL-MDNPEFLASSREYTLFRGVLDGKTVIVCSTGIGGPSTSIAV 78
Query: 78 EELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVG 137
EEL Q G+ T +R GT G+ P G +++ TG+VR DG S P+ +PA++D +V
Sbjct: 79 EELAQLGIRTFLRVGTTGAIQPHINVGDMIVTTGSVRLDGASLHFAPMEFPAVADFDVAT 138
Query: 138 ALIESAKSNGLSNEQYGVGIITTVGHFFDGP-------------LGNHNKLWARSKVLAI 184
A+ ++ G + G+ + F+ G + W VL
Sbjct: 139 AMKQAVIEEGAT---VHTGVTASSDTFYPGQERYDTFSGRVVKRFQGSMQEWQDMGVLNF 195
Query: 185 EMEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAK 244
EME++ L + + G+RAG + I R ++K P+ ++ + ++V +DAA+
Sbjct: 196 EMESATLLTMCASSGLRAGCVAGV---IVNR--TQKEIPDHALLKATETRSIKVVVDAAR 250
Query: 245 RLSSQ 249
R+ ++
Sbjct: 251 RMLAE 255
>gi|51594605|ref|YP_068796.1| uridine phosphorylase [Yersinia
pseudotuberculosis IP 32953]
ref|NP_407233.1| uridine phosphorylase [Yersinia pestis CO92]
emb|CAB94934.1| uridine phosphorylase [Yersinia pseudotuberculosis]
emb|CAC93253.1| uridine phosphorylase [Yersinia pestis CO92]
emb|CAH19490.1| uridine phosphorylase [Yersinia pseudotuberculosis IP 32953]
pir||AI0460 uridine phosphorylase (EC 2.4.2.3) [imported] - Yersinia pestis
(strain CO92)
Length = 253
Score = 101 bits (252), Expect = 2e-20
Identities = 70/241 (29%), Positives = 115/241 (47%), Gaps = 22/241 (9%)
Query: 19 VCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCFE 78
+ +V GDP R + +++ L + REF ++ ++V S GIGG S+ E
Sbjct: 21 LAIVPGDPQRVEKIAKLMDNPVHLA-SHREFTSWRAELDGKAVIVCSTGIGGPSTSIAVE 79
Query: 79 ELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVGA 138
EL Q GV T +R GT G+ P G +++ T AVR DG S P+ +PA++D A
Sbjct: 80 ELAQLGVRTFLRIGTTGAIQPHINVGDVLVTTAAVRLDGASLHFAPMEFPAVADFSCTTA 139
Query: 139 LIESAKSNGLSNEQYGVGIITTVGHF---------FDGPLGNHNK----LWARSKVLAIE 185
L+ +AKS G + +GI + F F G + H K W V+ E
Sbjct: 140 LVNAAKSVGATTH---IGITASSDTFYPGQERYDTFSGRVVRHFKGSMEEWQSMGVMNYE 196
Query: 186 MEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAKR 245
ME++ L + + +G+RAG + ++EI PN + + +++ ++AA+
Sbjct: 197 MESATLLTMCASQGLRAGMVAGVIVNRTQQEI-----PNEETMKATESHAVKIVVEAARH 251
Query: 246 L 246
L
Sbjct: 252 L 252
>gi|45443015|ref|NP_994554.1| uridine phosphorylase [Yersinia pestis
biovar Medievalis str. 91001]
ref|NP_667782.1| uridine phosphorylase [Yersinia pestis KIM]
gb|AAS63431.1| uridine phosphorylase [Yersinia pestis biovar Medievalis str.
91001]
gb|AAM84033.1| uridine phosphorylase [Yersinia pestis KIM]
Length = 268
Score = 101 bits (252), Expect = 2e-20
Identities = 70/241 (29%), Positives = 115/241 (47%), Gaps = 22/241 (9%)
Query: 19 VCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCFE 78
+ +V GDP R + +++ L + REF ++ ++V S GIGG S+ E
Sbjct: 36 LAIVPGDPQRVEKIAKLMDNPVHLA-SHREFTSWRAELDGKAVIVCSTGIGGPSTSIAVE 94
Query: 79 ELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVGA 138
EL Q GV T +R GT G+ P G +++ T AVR DG S P+ +PA++D A
Sbjct: 95 ELAQLGVRTFLRIGTTGAIQPHINVGDVLVTTAAVRLDGASLHFAPMEFPAVADFSCTTA 154
Query: 139 LIESAKSNGLSNEQYGVGIITTVGHF---------FDGPLGNHNK----LWARSKVLAIE 185
L+ +AKS G + +GI + F F G + H K W V+ E
Sbjct: 155 LVNAAKSVGATTH---IGITASSDTFYPGQERYDTFSGRVVRHFKGSMEEWQSMGVMNYE 211
Query: 186 MEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAKR 245
ME++ L + + +G+RAG + ++EI PN + + +++ ++AA+
Sbjct: 212 MESATLLTMCASQGLRAGMVAGVIVNRTQQEI-----PNEETMKATESHAVKIVVEAARH 266
Query: 246 L 246
L
Sbjct: 267 L 267
>gi|15790752|ref|NP_280576.1| Udp1 [Halobacterium salinarum NRC-1]
gb|AAG20056.1| uridine phosphorylase; Udp1 [Halobacterium sp. NRC-1]
pir||D84336 uridine phosphorylase [imported] - Halobacterium sp. NRC-1
Length = 258
Score = 101 bits (251), Expect = 2e-20
Identities = 72/263 (27%), Positives = 124/263 (46%), Gaps = 31/263 (11%)
Query: 7 PICLLPIGKLPKVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSH 66
P L+ G + V ++ GDP R ++ H +E+V RE+ ++ + + S
Sbjct: 5 PHLLVEDGDVNDVALLPGDPGRVDRIAS-HCDDSEVVAENREYKVVNATYEGVSLTICST 63
Query: 67 GIGGGGASVCFEELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLG 126
GIG A++ EEL + GV T+IR GT G G +++A GA +++G S+
Sbjct: 64 GIGCPSAAIAIEELAKVGVQTVIRVGTIGGLQAGVEVGDMIVANGAAKAEGTSKRYESAT 123
Query: 127 YPAISDHEVVGALI-------------ESAKSNGLSNEQYGVGIITTVGHFFDGPLGNHN 173
YPA+ + V+ L+ +SA ++G + VG I + F++ ++
Sbjct: 124 YPAVPAYSVLAELVDAAEATEGVGDHEQSAAADGPAGATVHVGPIVSDDAFYN-ESDDYV 182
Query: 174 KLWARSKVLAIEMEASILFIVASLRGIRAGACVNIDNYIF---------EREISEKYEPN 224
W + +L IEMEA+ +F +A RG+ AGA +D + + E+ EK + N
Sbjct: 183 ADWEAANLLGIEMEAATVFSLARRRGLAAGAICTVDGNLVAGTQKGADSDDELPEKAQNN 242
Query: 225 RDVVHQGTFKMLEVALDAAKRLS 247
+ +++ALDA LS
Sbjct: 243 -------VSRAIDIALDAVVALS 258
>gi|37528245|ref|NP_931590.1| uridine phosphorylase (UDRPase)
[Photorhabdus luminescens subsp. laumondii TTO1]
emb|CAE16789.1| uridine phosphorylase (UDRPase) [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 251
Score = 101 bits (251), Expect = 2e-20
Identities = 70/241 (29%), Positives = 114/241 (47%), Gaps = 22/241 (9%)
Query: 19 VCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCFE 78
+ +V GDP R + ++ L ++REF ++ T ++V S GIGG S+ E
Sbjct: 19 LAIVPGDPKRVEKIARLMDNPVHLA-SLREFTSWRAEIDGTAVIVCSTGIGGPSTSIAVE 77
Query: 79 ELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVGA 138
EL Q GV T +R GT G+ G +++ T AVR DG S P+ +PA++D E A
Sbjct: 78 ELAQLGVRTFLRIGTTGAIQENINVGDVLVTTAAVRLDGASLHFAPMEFPAVADFECTTA 137
Query: 139 LIESAKSNGLSNEQYGVGIITTVGHFFDGP-------------LGNHNKLWARSKVLAIE 185
L E+AK G++ VG+ + F+ G W V+ E
Sbjct: 138 LYEAAKDLGVT---VHVGVTASSDTFYPGQERYDTYSGRVVSRFKGSMAEWQAMGVMNYE 194
Query: 186 MEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAKR 245
ME++ L + + +G+RAG + ++EI PN ++ + L + ++AA+R
Sbjct: 195 MESATLLTMCASQGLRAGMVAGVIVNRTQQEI-----PNVKLLEKTESNALGIVVEAARR 249
Query: 246 L 246
L
Sbjct: 250 L 250
>gi|23479778|gb|EAA16513.1| purine nucleoside phosphorylase
[Plasmodium yoelii yoelii]
Length = 244
Score = 101 bits (251), Expect = 2e-20
Identities = 70/241 (29%), Positives = 120/241 (49%), Gaps = 25/241 (10%)
Query: 19 VCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCFE 78
V +VVGDP R + +L C RE+ + +K + L +SHG+G G ++CFE
Sbjct: 18 VVLVVGDPGRVDKIKVLCDSYVDLACN-REYKSVECHYKGQKFLCVSHGVGSAGCAICFE 76
Query: 79 ELIQAGVTTIIRAGTAGSFDPR-YREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVG 137
ELI G IIRAG+ GS P + G L + AVR D V+ ++ +PA++D+EV
Sbjct: 77 ELINIGAKVIIRAGSCGSLQPESIKRGDLCVCNAAVREDRVTHMMIHSDFPAVADYEVYS 136
Query: 138 ALIESAKS------NGL---SNEQYGVGIITTVGHFFDGPLGNHNKLWARSKVLAIEMEA 188
L++ A+ NG+ S+ Y II T D ++++ V +EME
Sbjct: 137 TLLKCAEELNVKVHNGISLSSDLYYPHSIIPT--RLLD---------YSKANVAVVEMEL 185
Query: 189 SILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAKRLSS 248
S L ++ +L+ ++ G +D + ++ + + + M++++L+A RLS
Sbjct: 186 STLMVMGTLKKVKTGGIFIVDGCPLK---WDEGDFDNVLAADRLENMIKISLEACARLSE 242
Query: 249 Q 249
+
Sbjct: 243 K 243
>gi|33520060|ref|NP_878892.1| uridine phosphorylase [Candidatus
Blochmannia floridanus]
emb|CAD83299.1| uridine phosphorylase [Candidatus Blochmannia floridanus]
Length = 271
Score = 100 bits (250), Expect = 3e-20
Identities = 79/245 (32%), Positives = 123/245 (49%), Gaps = 23/245 (9%)
Query: 18 KVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCF 77
K+ ++ GDP+R K ++ + + REF + ++++ S GIGG S+
Sbjct: 22 KLAILPGDPDRVKKIALL-MDNPKYISKNREFTIWSANLNKNKIIICSTGIGGPSTSIVV 80
Query: 78 EELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVG 137
EEL Q G+ +R GTAG+ P GS++I T AVR DG S+ PL +PA++D
Sbjct: 81 EELSQLGIRIFLRIGTAGAIQPYLTVGSVLIVTAAVRYDGASQHFAPLEFPAVADLSCSL 140
Query: 138 ALIESAKSNGLSNEQYGVGIITTVGHFFDG-------------PLGNHNKLWARSKVLAI 184
ALI+SA++ +S++ Y GI + F+ G L + W V+
Sbjct: 141 ALIQSAQA--ISSKTYW-GINVSSDTFYPGQERLNTYSGWVIKKLKGSMEEWKNMGVMGY 197
Query: 185 EME-ASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAA 243
EME A++L + AS + +RAG+ V I I R ++K PN D V ++ + AA
Sbjct: 198 EMESATLLTMCASQKNLRAGSIVGI---IVNR--TQKEIPNLDSVLHAENIAIQSVIKAA 252
Query: 244 KRLSS 248
K L S
Sbjct: 253 KMLLS 257
>gi|27361545|gb|AAO10453.1| Uridine phosphorylase [Vibrio vulnificus
CMCP6]
ref|NP_760926.1| Uridine phosphorylase [Vibrio vulnificus CMCP6]
Length = 252
Score = 100 bits (249), Expect = 3e-20
Identities = 64/241 (26%), Positives = 117/241 (47%), Gaps = 22/241 (9%)
Query: 19 VCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCFE 78
+ ++ GDP R + ++E+ + + RE+ Y+ ++V S GIGG S+ E
Sbjct: 20 LAIIPGDPARVQKIAEE-MENPVFLASHREYTLYRAELDGKPVVVCSTGIGGPSTSIAVE 78
Query: 79 ELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVGA 138
EL Q GV T +R GT G+ P G +++ TG+VR DG S P+ +PA++D +V A
Sbjct: 79 ELAQLGVRTFLRVGTTGAIQPHVNVGDMIVTTGSVRLDGASLHFAPMEFPAVADFDVATA 138
Query: 139 LIESAKSNGLSNEQYGVGIITTVGHFFDGP-------------LGNHNKLWARSKVLAIE 185
+ +A+ +G + G+ + F+ G K W VL E
Sbjct: 139 MKAAAQESGAT---VHTGVTASSDTFYPGQERYDTFTGRVVSRFQGSMKEWQDMGVLNFE 195
Query: 186 MEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAKR 245
ME++ L + + G+RAG + I R ++K P+ + + + ++V +++A++
Sbjct: 196 MESATLLTMCASSGLRAGCVAGV---IINR--TQKEIPDHATLKETEARSIKVVVESARK 250
Query: 246 L 246
+
Sbjct: 251 M 251
>gi|50119145|ref|YP_048312.1| uridine phosphorylase [Erwinia
carotovora subsp. atroseptica SCRI1043]
emb|CAG73104.1| uridine phosphorylase [Erwinia carotovora subsp. atroseptica
SCRI1043]
Length = 256
Score = 100 bits (248), Expect = 4e-20
Identities = 69/241 (28%), Positives = 115/241 (47%), Gaps = 22/241 (9%)
Query: 19 VCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCFE 78
+ +V GDP R + ++ L + REF ++ ++V S GIGG S+ E
Sbjct: 21 LAIVPGDPERVEKIARLMDNPVHLA-SHREFTSWRAELDGKAVIVCSTGIGGPSTSIAVE 79
Query: 79 ELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVGA 138
EL Q G+ T +R GT G+ P G +++ T AVR DG S P+ +PA++D A
Sbjct: 80 ELAQLGIRTFLRVGTTGAIQPGINVGDVLVTTAAVRLDGASLHFAPMEFPAVADFGCTTA 139
Query: 139 LIESAKSNGLSNEQYGVGIITTVGHFFDGP-------------LGNHNKLWARSKVLAIE 185
L+++AK++G++ VGI + F+ G + W VL E
Sbjct: 140 LVDAAKASGIA---LHVGITASSDTFYPGQERYDTFSGRVVRRFRGSMEEWQSMGVLNYE 196
Query: 186 MEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAKR 245
ME++ L + + +G++AG I ++EI P+ + +++V LDA +R
Sbjct: 197 MESATLLTMCASQGLKAGMIAGIIVNRTQQEI-----PDVATMKLAETNVIKVLLDATRR 251
Query: 246 L 246
L
Sbjct: 252 L 252
>gi|37680561|ref|NP_935170.1| uridine phosphorylase [Vibrio
vulnificus YJ016]
dbj|BAC95141.1| uridine phosphorylase [Vibrio vulnificus YJ016]
Length = 252
Score = 100 bits (248), Expect = 4e-20
Identities = 64/241 (26%), Positives = 116/241 (47%), Gaps = 22/241 (9%)
Query: 19 VCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCFE 78
+ ++ GDP R + ++E+ + + RE+ Y+ ++V S GIGG S+ E
Sbjct: 20 LAIIPGDPARVQKIAEE-MENPVFLASHREYTLYRAELDGKPVVVCSTGIGGPSTSIAVE 78
Query: 79 ELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVGA 138
EL Q GV T +R GT G+ P G +++ TG+VR DG S P+ +PA++D +V A
Sbjct: 79 ELAQLGVRTFLRVGTTGAIQPHVNVGDMIVTTGSVRLDGASLHFAPMEFPAVADFDVATA 138
Query: 139 LIESAKSNGLSNEQYGVGIITTVGHFFDGP-------------LGNHNKLWARSKVLAIE 185
+ +A +G + G+ + F+ G K W VL E
Sbjct: 139 MKAAALESGAT---VHTGVTASSDTFYPGQERYDTFTGRVVSRFQGSMKEWQEMGVLNFE 195
Query: 186 MEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAKR 245
ME++ L + + G+RAG + I R ++K P+ + + + ++V +++A++
Sbjct: 196 MESATLLTMCASSGLRAGCVAGV---IINR--TQKEIPDHATLKETEARSIKVVVESARK 250
Query: 246 L 246
+
Sbjct: 251 M 251
>gi|28897734|ref|NP_797339.1| uridine phosphorylase [Vibrio
parahaemolyticus RIMD 2210633]
dbj|BAC59223.1| uridine phosphorylase [Vibrio parahaemolyticus RIMD 2210633]
Length = 252
Score = 99.4 bits (246), Expect = 8e-20
Identities = 63/241 (26%), Positives = 117/241 (48%), Gaps = 22/241 (9%)
Query: 19 VCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCFE 78
+ ++ GDP R + ++E+ + + RE+ Y+ ++V S GIGG S+ E
Sbjct: 20 LAIIPGDPARVQKIAEQ-MENPVFLASHREYTLYRAELDGKPVVVCSTGIGGPSTSIAVE 78
Query: 79 ELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVGA 138
EL Q GV T +R GT G+ P G +++ TG+VR DG S P+ +PA++D +V A
Sbjct: 79 ELAQLGVRTFLRVGTTGAIQPHVNVGDMIVTTGSVRLDGASLHFAPMEFPAVADFDVATA 138
Query: 139 LIESAKSNGLSNEQYGVGIITTVGHFFDGP-------------LGNHNKLWARSKVLAIE 185
+ + + +G + +G+ + F+ G K W VL E
Sbjct: 139 MKAAVEESGAT---VHMGVTASSDTFYPGQERYDTFTGRVVKRFQGSMKEWQDMGVLNFE 195
Query: 186 MEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAKR 245
ME++ L + + G++AG + I R ++K P+ + + + ++V ++AA++
Sbjct: 196 MESATLLTMCASSGLKAGCVAGV---IINR--TQKEIPDHATLKETEARSIKVVVEAARK 250
Query: 246 L 246
+
Sbjct: 251 M 251
>gi|9655498|gb|AAF94193.1| uridine phosphorylase [Vibrio cholerae O1
biovar eltor str. N16961]
ref|NP_230679.1| uridine phosphorylase [Vibrio cholerae O1 biovar eltor str. N16961]
pir||B82249 uridine phosphorylase VC1034 [imported] - Vibrio cholerae (strain
N16961 serogroup O1)
Length = 258
Score = 99.0 bits (245), Expect = 1e-19
Identities = 64/241 (26%), Positives = 116/241 (47%), Gaps = 22/241 (9%)
Query: 19 VCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCFE 78
+ ++ GDP R + ++E + + RE+ Y+ ++V S GIGG S+ E
Sbjct: 25 LAIIPGDPARVQKIAEL-MDNPVFLASHREYTVYRAELDGQSVVVCSTGIGGPSTSIAVE 83
Query: 79 ELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVGA 138
EL Q GV T +R GT G+ P G +++ TG+VR DG S P+ +PA+ D +V A
Sbjct: 84 ELAQLGVRTFLRVGTTGAIQPHVNVGDMIVTTGSVRLDGASLHFAPMEFPAVPDFDVATA 143
Query: 139 LIESAKSNGLSNEQYGVGIITTVGHFFDGP-------------LGNHNKLWARSKVLAIE 185
+ +A+ +G + +G+ + F+ G K W VL E
Sbjct: 144 MKAAAQESGAT---VHMGVTASSDTFYPGQERYDTFTGRVVRRFQGSMKEWQDMGVLNFE 200
Query: 186 MEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAKR 245
ME++ L + + G++AG + I R ++K P+ + + + ++V ++AA++
Sbjct: 201 MESATLLTMCASSGLKAGCVAGV---IINR--TQKEIPDHATLKETEARSIKVVVEAARK 255
Query: 246 L 246
+
Sbjct: 256 M 256
>gi|8670903|emb|CAB94933.1| uridine phosphorylase [Vibrio cholerae]
Length = 253
Score = 99.0 bits (245), Expect = 1e-19
Identities = 64/241 (26%), Positives = 116/241 (47%), Gaps = 22/241 (9%)
Query: 19 VCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCFE 78
+ ++ GDP R + ++E + + RE+ Y+ ++V S GIGG S+ E
Sbjct: 20 LAIIPGDPARVQKIAEL-MDNPVFLASHREYTVYRAELDGQSVVVCSTGIGGPSTSIAVE 78
Query: 79 ELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVGA 138
EL Q GV T +R GT G+ P G +++ TG+VR DG S P+ +PA+ D +V A
Sbjct: 79 ELAQLGVRTFLRVGTTGAIQPHVNVGDMIVTTGSVRLDGASLHFAPMEFPAVPDFDVATA 138
Query: 139 LIESAKSNGLSNEQYGVGIITTVGHFFDGP-------------LGNHNKLWARSKVLAIE 185
+ +A+ +G + +G+ + F+ G K W VL E
Sbjct: 139 MKAAAQESGAT---VHMGVTASSDTFYPGQERYDTFTGRVVRRFQGSMKEWQDMGVLNFE 195
Query: 186 MEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAKR 245
ME++ L + + G++AG + I R ++K P+ + + + ++V ++AA++
Sbjct: 196 MESATLLTMCASSGLKAGCVAGV---IINR--TQKEIPDHATLKETEARSIKVVVEAARK 250
Query: 246 L 246
+
Sbjct: 251 M 251
>gi|59712128|ref|YP_204904.1| uridine phosphorylase [Vibrio fischeri
ES114]
gb|AAW86016.1| uridine phosphorylase [Vibrio fischeri ES114]
Length = 252
Score = 99.0 bits (245), Expect = 1e-19
Identities = 64/242 (26%), Positives = 116/242 (47%), Gaps = 22/242 (9%)
Query: 18 KVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCF 77
++ ++ GDP R + ++E+ + + + RE+ Y +++V S GIGG S+
Sbjct: 19 EMAIIPGDPARVQKIAEQ-MENPKFLASHREYTVYLAELDGKKIVVCSTGIGGPSTSIAV 77
Query: 78 EELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVG 137
EEL Q GV T +R GT G+ P G +++ TG+VR DG S P+ +PA++D +V
Sbjct: 78 EELAQLGVRTFLRVGTTGAIQPHVNVGDMIVTTGSVRLDGASLHFAPMEFPAVADFDVAT 137
Query: 138 ALIESAKSNGLSNEQYGVGIITTVGHFFDGP-------------LGNHNKLWARSKVLAI 184
A+ ++ G + G+ + F+ G + W VL
Sbjct: 138 AMRKAVVDQGAN---VHTGVTASSDTFYPGQERYDTFSGRVVKRFQGSMQEWQDMGVLNF 194
Query: 185 EMEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAK 244
EME++ L + + G+RAG + I R ++K P+ + + + ++V ++AA+
Sbjct: 195 EMESATLLTMCASSGLRAGCVAGV---IINR--TQKEIPDHATLKETEARSIKVVIEAAR 249
Query: 245 RL 246
L
Sbjct: 250 NL 251
>gi|55230061|gb|AAV45480.1| uridine phosphorylase [Haloarcula
marismortui ATCC 43049]
ref|YP_135186.1| uridine phosphorylase [Haloarcula marismortui ATCC 43049]
Length = 274
Score = 97.8 bits (242), Expect = 2e-19
Identities = 65/197 (32%), Positives = 101/197 (50%), Gaps = 16/197 (8%)
Query: 24 GDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCFEELIQA 83
G+P R + V + ++ ++V RE+ G T + V S GIGG A++ EEL +
Sbjct: 31 GNPERVEKVVD-YWDDHDIVAEHREYRTATGNHDGTPISVTSTGIGGPSAAIALEELARV 89
Query: 84 GVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVGALIESA 143
G + IR G+ G+ G LVI TGAVR +G S+ V YPA +DH +V AL+ +A
Sbjct: 90 GADSFIRVGSCGAIQEEASIGDLVITTGAVRQEGTSKEYVREDYPASADHRIVSALVAAA 149
Query: 144 KSNGLSNEQYGVGIITTVGHFFDG----------PLGNHNKLWA--RSKVLAIEMEASIL 191
+ G Y +G+ + F+ G G+ ++ A + VL EMEA+ +
Sbjct: 150 EELGY---DYHLGVTCSTDSFYAGQSRPGFEDFEASGSDERIAALQEAGVLNFEMEAATI 206
Query: 192 FIVASLRGIRAGACVNI 208
+A+L G+RAGA +
Sbjct: 207 LTLANLYGLRAGAVCTV 223
>gi|23613155|ref|NP_703477.1| uridine phosphorylase, putative
[Plasmodium falciparum 3D7]
gb|AAL74412.1| purine nucleoside phosphorylase [Plasmodium falciparum]
emb|CAD51497.1| uridine phosphorylase, putative [Plasmodium falciparum 3D7]
Length = 245
Score = 97.4 bits (241), Expect = 3e-19
Identities = 70/242 (28%), Positives = 123/242 (49%), Gaps = 19/242 (7%)
Query: 15 KLPKVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGAS 74
++ V +VVGDP R + +L RE+ + +K + L +SHG+G G +
Sbjct: 14 QITPVVLVVGDPGRVDKIKVVCDSYVDLAYN-REYKSVECHYKGQKFLCVSHGVGSAGCA 72
Query: 75 VCFEELIQAGVTTIIRAGTAGSFDP-RYREGSLVIATGAVRSDGVSEGLVPLGYPAISDH 133
VCFEEL Q G IIRAG+ GS P + G + I AVR D VS L+ +PA+ D
Sbjct: 73 VCFEELCQNGAKVIIRAGSCGSLQPDLIKRGDICICNAAVREDRVSHLLIHGDFPAVGDF 132
Query: 134 EVVGALIESAKS------NGLSNEQYGVGIITTVGHFFDGPLGNHNKLWARSKVLAIEME 187
+V L + A+ NG+S +++ ++ + + + + ++++ +EME
Sbjct: 133 DVYDTLNKCAQELNVPVFNGIS--------VSSDMYYPNKIIPSRLEDYSKANAAVVEME 184
Query: 188 ASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAKRLS 247
+ L ++ +LR ++ G + +D F+ + E N V HQ M+++AL A +L+
Sbjct: 185 LATLMVIGTLRKVKTGGILIVDGCPFKWD--EGDFDNNLVPHQ-LENMIKIALGACAKLA 241
Query: 248 SQ 249
++
Sbjct: 242 TK 243
>gi|28900934|ref|NP_800589.1| uridine phosphorylase [Vibrio
parahaemolyticus RIMD 2210633]
dbj|BAC62422.1| uridine phosphorylase [Vibrio parahaemolyticus RIMD 2210633]
Length = 243
Score = 97.4 bits (241), Expect = 3e-19
Identities = 65/225 (28%), Positives = 111/225 (48%), Gaps = 8/225 (3%)
Query: 21 VVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCFEEL 80
+V G+P+RA ++ F E+V RE+ + G +K + V S GIG + EEL
Sbjct: 19 IVCGEPDRANRIAAL-FDDAEMVSENREYRVFTGNYKGQTVSVCSTGIGAPSMIIAVEEL 77
Query: 81 IQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVGALI 140
Q GVT ++R G+AG+ + + G L++A GAVR +G S+ V YPA + + L
Sbjct: 78 KQCGVTHVVRVGSAGAMQSQIQLGELIVAEGAVRDEGGSKSYVDSAYPAYASFTL---LK 134
Query: 141 ESAKSNGLSNEQYGVGIITTVGHFFDGPLGNHNKLWARSKVLAIEMEASILFIVASLRGI 200
E + Y G++ + F+ + W + +L +ME S LF V LRG+
Sbjct: 135 EVERYLSTQTTPYHFGVVRSHDSFYTDDEEAICQYWNKKGILGADMETSALFTVGRLRGL 194
Query: 201 RAGACVNIDNYIFEREISE---KYEPNRDVVHQGTFKMLEVALDA 242
+ +N + ++++++ E +Y V+ +G AL+A
Sbjct: 195 HVASILN-NVVLYQQDVKEGVGQYVDEAKVMMEGEKLASFTALEA 238
>gi|47168599|pdb|1Q1G|F Chain F, Crystal Structure Of Plasmodium
Falciparum Pnp With 5'- Methylthio-Immucillin-H
pdb|1Q1G|E Chain E, Crystal Structure Of Plasmodium Falciparum Pnp With 5'-
Methylthio-Immucillin-H
pdb|1Q1G|D Chain D, Crystal Structure Of Plasmodium Falciparum Pnp With 5'-
Methylthio-Immucillin-H
pdb|1Q1G|C Chain C, Crystal Structure Of Plasmodium Falciparum Pnp With 5'-
Methylthio-Immucillin-H
pdb|1Q1G|B Chain B, Crystal Structure Of Plasmodium Falciparum Pnp With 5'-
Methylthio-Immucillin-H
pdb|1Q1G|A Chain A, Crystal Structure Of Plasmodium Falciparum Pnp With 5'-
Methylthio-Immucillin-H
pdb|1NW4|F Chain F, Crystal Structure Of Plasmodium Falciparum Purine
Nucleoside Phosphorylase In Complex With Immh And
Sulfate
pdb|1NW4|E Chain E, Crystal Structure Of Plasmodium Falciparum Purine
Nucleoside Phosphorylase In Complex With Immh And
Sulfate
pdb|1NW4|D Chain D, Crystal Structure Of Plasmodium Falciparum Purine
Nucleoside Phosphorylase In Complex With Immh And
Sulfate
pdb|1NW4|C Chain C, Crystal Structure Of Plasmodium Falciparum Purine
Nucleoside Phosphorylase In Complex With Immh And
Sulfate
pdb|1NW4|B Chain B, Crystal Structure Of Plasmodium Falciparum Purine
Nucleoside Phosphorylase In Complex With Immh And
Sulfate
pdb|1NW4|A Chain A, Crystal Structure Of Plasmodium Falciparum Purine
Nucleoside Phosphorylase In Complex With Immh And
Sulfate
Length = 276
Score = 97.4 bits (241), Expect = 3e-19
Identities = 70/242 (28%), Positives = 123/242 (49%), Gaps = 19/242 (7%)
Query: 15 KLPKVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGAS 74
++ V +VVGDP R + +L RE+ + +K + L +SHG+G G +
Sbjct: 16 QITPVVLVVGDPGRVDKIKVVCDSYVDLAYN-REYKSVECHYKGQKFLCVSHGVGSAGCA 74
Query: 75 VCFEELIQAGVTTIIRAGTAGSFDP-RYREGSLVIATGAVRSDGVSEGLVPLGYPAISDH 133
VCFEEL Q G IIRAG+ GS P + G + I AVR D VS L+ +PA+ D
Sbjct: 75 VCFEELCQNGAKVIIRAGSCGSLQPDLIKRGDICICNAAVREDRVSHLLIHGDFPAVGDF 134
Query: 134 EVVGALIESAKS------NGLSNEQYGVGIITTVGHFFDGPLGNHNKLWARSKVLAIEME 187
+V L + A+ NG+S +++ ++ + + + + ++++ +EME
Sbjct: 135 DVYDTLNKCAQELNVPVFNGIS--------VSSDMYYPNKIIPSRLEDYSKANAAVVEME 186
Query: 188 ASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAKRLS 247
+ L ++ +LR ++ G + +D F+ + E N V HQ M+++AL A +L+
Sbjct: 187 LATLMVIGTLRKVKTGGILIVDGCPFKWD--EGDFDNNLVPHQ-LENMIKIALGACAKLA 243
Query: 248 SQ 249
++
Sbjct: 244 TK 245
>gi|59713713|ref|YP_206488.1| uridine phosphorylase [Vibrio fischeri
ES114]
gb|AAW87600.1| uridine phosphorylase [Vibrio fischeri ES114]
Length = 244
Score = 97.1 bits (240), Expect = 4e-19
Identities = 62/219 (28%), Positives = 110/219 (49%), Gaps = 19/219 (8%)
Query: 13 IGKLPKVCV----------VVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEML 62
+ K P +CV V G+P+R + E V EL+ RE+ + G++K T +
Sbjct: 1 MSKQPHICVDENQVSPYVIVCGEPDRVNRIVELMDNV-ELLAENREYRVFNGVYKGTTIT 59
Query: 63 VMSHGIGGGGASVCFEELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGL 122
+ S GIG + EEL G T +IR G+AG+ + G L++A GAVR +G S+
Sbjct: 60 ICSTGIGAPSMIIAVEELKLCGATHVIRVGSAGAMQDHIQLGELIVAEGAVRDEGGSKAY 119
Query: 123 VPLGYPAISDHEVVGALIESAKSNGLSNE--QYGVGIITTVGHFFDGPLGNHNKLWARSK 180
+ YPA + ++ + S+ L N+ +Y G++ + F+ + W +
Sbjct: 120 ISSAYPAYASFALLKEI-----SHFLENQSVKYYFGVVRSHDSFYTDEEDQLCQYWNKKG 174
Query: 181 VLAIEMEASILFIVASLRGIRAGACVNIDNYIFEREISE 219
+L +ME S LF V LRG++ + +N + ++++++ E
Sbjct: 175 ILGADMETSALFTVGRLRGLQVASILN-NVVLYQQDVKE 212
>gi|56500828|emb|CAH99775.1| uridine phosphorylase, putative
[Plasmodium berghei]
Length = 244
Score = 95.9 bits (237), Expect = 8e-19
Identities = 63/201 (31%), Positives = 101/201 (49%), Gaps = 22/201 (10%)
Query: 19 VCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCFE 78
V +VVGDP R + +L RE+ + +K + L +SHG+G G ++CFE
Sbjct: 18 VVLVVGDPGRVDKIKVLCDSYVDLAYN-REYKSVECHYKGQKFLCVSHGVGSSGCAICFE 76
Query: 79 ELIQAGVTTIIRAGTAGSFDPR-YREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVG 137
ELI G IIRAG+ GS P + G L + AVR D V+ ++ +PA++D+EV
Sbjct: 77 ELINIGAKVIIRAGSCGSLQPESIKRGDLCVCNAAVREDRVTHMMIHSDFPAVADYEVYS 136
Query: 138 ALIESAKS------NGL---SNEQYGVGIITTVGHFFDGPLGNHNKLWARSKVLAIEMEA 188
L++ A+ NG+ S+ Y II T D ++++ V +EME
Sbjct: 137 TLLKCAEELNVKVHNGISLSSDLYYPHSIIPT--RLLD---------YSKANVAVVEMEL 185
Query: 189 SILFIVASLRGIRAGACVNID 209
S L ++ +L+ ++ G +D
Sbjct: 186 STLMVMGTLKKVKTGGIFIVD 206
>gi|9657521|gb|AAF96047.1| uridine phosphorylase [Vibrio cholerae O1
biovar eltor str. N16961]
ref|NP_232534.1| uridine phosphorylase [Vibrio cholerae O1 biovar eltor str. N16961]
pir||F82497 uridine phosphorylase VCA0134 [imported] - Vibrio cholerae (strain
N16961 serogroup O1)
Length = 243
Score = 95.5 bits (236), Expect = 1e-18
Identities = 61/201 (30%), Positives = 102/201 (50%), Gaps = 6/201 (2%)
Query: 17 PKVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVC 76
P+V VV G+PNRA ++ ELV RE+ + G +++ + V S GIG +
Sbjct: 14 PRV-VVCGEPNRANRIASL-LNNAELVAENREYRLFSGEFEEQPITVCSTGIGAPSMIIA 71
Query: 77 FEELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVV 136
EEL ++G I+R G+AG+ G L++ GAVR +G S+ + YPA S E+V
Sbjct: 72 VEELARSGAKAIVRVGSAGAMQSEIGLGELILVEGAVRDEGGSKAYIGAAYPAYSSFELV 131
Query: 137 GALIESAKSNGLSNEQYGVGIITTVGHFFDGPLGNHNKLWARSKVLAIEMEASILFIVAS 196
+E + + GI+ + F+ + W R +LA +ME S L V
Sbjct: 132 ---VEMQRFLAEQSVPIHRGIVRSHDSFYTDEEAELCRYWHRKGILAADMETSALLTVGR 188
Query: 197 LRGIRAGACVNIDNYIFEREI 217
LRG++ + +N + ++E+++
Sbjct: 189 LRGLQVASVLN-NVVLYEQDV 208
>gi|24375619|ref|NP_719662.1| uridine phosphorylase [Shewanella
oneidensis MR-1]
gb|AAN57106.1| uridine phosphorylase [Shewanella oneidensis MR-1]
Length = 252
Score = 95.1 bits (235), Expect = 1e-18
Identities = 64/241 (26%), Positives = 109/241 (44%), Gaps = 22/241 (9%)
Query: 19 VCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCFE 78
+ +V GDP R K ++E T L + RE+ Y +++ S GIGG S+ E
Sbjct: 19 LAIVPGDPERVKRIAELMDNATFLA-SHREYTSYLAYADGKPVVICSTGIGGPSTSIAVE 77
Query: 79 ELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVGA 138
EL Q GV T +R GT G+ P G +++ +VR DG S P+ +PA+++ E A
Sbjct: 78 ELAQLGVNTFLRVGTTGAIQPHVNVGDVIVTQASVRLDGASLHFAPMEFPAVANFECTTA 137
Query: 139 LIESAKSNGLSNEQYGVGIITTVGHFFDGP-------------LGNHNKLWARSKVLAIE 185
++ + + G+ +G+ + F+ G K W VL E
Sbjct: 138 MVAACRDAGVEPH---IGVTASSDTFYPGQERYDTVTGRVTRRFAGSMKEWQDMGVLNYE 194
Query: 186 MEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAKR 245
ME++ LF + + +G RA + ++EI P+ + + + + + AAK+
Sbjct: 195 MESATLFTMCATQGWRAACVAGVIVNRTQQEI-----PDEATMKKTEVSAVSIVVAAAKK 249
Query: 246 L 246
L
Sbjct: 250 L 250
>gi|15672821|ref|NP_266995.1| uridine phosphorylase [Lactococcus
lactis subsp. lactis Il1403]
gb|AAK04937.1| uridine phosphorylase [Lactococcus lactis subsp. lactis Il1403]
pir||G86729 uridine phosphorylase [imported] - Lactococcus lactis subsp. lactis
(strain IL1403)
Length = 238
Score = 95.1 bits (235), Expect = 1e-18
Identities = 72/233 (30%), Positives = 116/233 (48%), Gaps = 22/233 (9%)
Query: 21 VVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCFEEL 80
++VGDP R V+ K + + REF G +K E+LV+S G+G A++ EEL
Sbjct: 20 IIVGDPARIDQVA-KFLTDVKNLKYNREFRSICGTYKGKELLVLSTGVGAPSAAIAIEEL 78
Query: 81 IQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVGALI 140
GV IIR G+AG+ GS +I GAVR DG+++ VP YPA+ +++
Sbjct: 79 HNIGVKRIIRVGSAGALQLGIDLGSPIIGEGAVRDDGLTKMYVPEQYPAVPSTDLLNKAK 138
Query: 141 ESAKSNGLSNEQYGVGIITTVGHFFDGPLGNHNK---LWARSKVLAIEMEASILFIVASL 197
E A GII + F+ + NH + W++ ++ +ME+ LF V L
Sbjct: 139 EIAPDG-------FYGIIRSHDGFY---MDNHEETQAYWSKFGIVGEDMESGALFTVGRL 188
Query: 198 RGIRAGACVNIDNYI-----FEREISEKYEPNRDVVHQGTFKMLEVALDAAKR 245
RGI + +N N + + +++ N D V++G + +E+AL+ R
Sbjct: 189 RGIETLSILN--NVVAYGGDLQAGVNDLVSGN-DKVNKGELRTIEIALEILNR 238
>gi|27359313|gb|AAO08257.1| Uridine phosphorylase [Vibrio vulnificus
CMCP6]
ref|NP_763267.1| Uridine phosphorylase [Vibrio vulnificus CMCP6]
Length = 242
Score = 94.7 bits (234), Expect = 2e-18
Identities = 64/226 (28%), Positives = 110/226 (48%), Gaps = 10/226 (4%)
Query: 21 VVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCFEEL 80
+V G+P+RA ++ ELV RE+ + G ++ + V S GIG + EEL
Sbjct: 19 IVCGEPDRANRIAAL-LENAELVAENREYRLFNGEFQGKAITVCSTGIGAPSMIIAVEEL 77
Query: 81 IQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVGALI 140
Q G IIR G+AG+ P G L++A GAVR +G S+ + YPA + ++ L
Sbjct: 78 KQCGAKYIIRVGSAGAMQPNIALGELIVAEGAVRDEGGSKAYIDAAYPAYASFSLLKGLD 137
Query: 141 ESAKSNGLSNEQYGVGIITTVGHFFDGPLGNHNKLWARSKVLAIEMEASILFIVASLRGI 200
++ + Y +G++ + F+ + W + +L +ME S LF V LRG+
Sbjct: 138 GYLQTQAV---PYHMGVVRSHDSFYTDDEETLCQYWNKKGILGADMETSALFTVGRLRGL 194
Query: 201 RAGACVNIDNYI-FEREISE---KYEPNRDVVHQGTFKMLEVALDA 242
+ +N N + +++++ E +Y + D + G + AL A
Sbjct: 195 HVASVLN--NVVRYQQDVKEGVSQYVNDDDAMMAGEKRASLAALTA 238
>gi|56415771|ref|YP_152846.1| probable uridine phosphorylase
[Salmonella enterica subsp. enterica serovar Paratypi A
str. ATCC 9150]
gb|AAV79534.1| probable uridine phosphorylase [Salmonella enterica subsp. enterica
serovar Paratypi A str. ATCC 9150]
Length = 231
Score = 94.7 bits (234), Expect = 2e-18
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 24/228 (10%)
Query: 18 KVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCF 77
K ++ GDP R ++ + E++ REF +G ++ E++V+S GIGG ++
Sbjct: 15 KYALLPGDPGRVDRIA-RFLDKAEILGQNREFRAARGWYQGVEIVVLSTGIGGPSTAIAI 73
Query: 78 EELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVG 137
EEL Q GV T+IR G+ GAV DG S+ P YPA +D +
Sbjct: 74 EELRQVGVNTLIRIGSC----------------GAVADDGASKTYAPASYPACADPYLTA 117
Query: 138 ALIESAKSNGLSNEQYGVGIITTVGHFFDGPLGNHNKLWARSKVLAIEMEASILFIVASL 197
LI+ AK +S G++ + F+ + W+ VL +ME + L +V +L
Sbjct: 118 TLIQQAKQMNISAV---CGLVRSHDSFYTDREAELDAEWSARGVLGADMETAALMVVGAL 174
Query: 198 RGIRAGACVNI---DNYIFEREISEKYEPNRDVVHQGTFKMLEVALDA 242
RG+R + +N+ + E I+ Y + QG + + +AL A
Sbjct: 175 RGLRTASLLNVVVAHSGCLESSINH-YVQQETLCQQGEERQISLALQA 221
>gi|15790029|ref|NP_279853.1| Udp2 [Halobacterium salinarum NRC-1]
gb|AAG19333.1| uridine phosphorylase; Udp2 [Halobacterium sp. NRC-1]
pir||A84246 uridine phosphorylase [imported] - Halobacterium sp. NRC-1
Length = 273
Score = 94.0 bits (232), Expect = 3e-18
Identities = 62/175 (35%), Positives = 89/175 (50%), Gaps = 17/175 (9%)
Query: 47 REFHCYKGMWKDTEMLVMSHGIGGGGASVCFEELIQAGVTTIIRAGTAGSFDPRYREGSL 106
RE+ G + T + V S GIG A++ EEL +AG T IR G+ G+ G L
Sbjct: 53 REYRTATGAYDGTPISVTSTGIGSPSAAIAVEELARAGADTFIRVGSCGALQADMEPGDL 112
Query: 107 VIATGAVRSDGVSEGLVPLGYPAISDHEVVGALIESAKSNGLSNEQYGVGIITTVGHFFD 166
VI GAVR +G ++ V YPA++DHEVV ALI +A+ G Y VG+ + F+
Sbjct: 113 VITRGAVRQEGTTDEYVREDYPAVADHEVVAALIAAAERLG---HDYHVGLTMSADSFYA 169
Query: 167 GPLGNHNKLWAR-------------SKVLAIEMEASILFIVASLRGIRAGACVNI 208
G G R + V IEMEA+ + +A++ G+RAGA ++
Sbjct: 170 GQ-GRDGFEGFRAPGADAMLDELRDANVKNIEMEAAAICTLANVYGLRAGAVCSV 223
>gi|47169189|pdb|1SQ6|A Chain A, Plasmodium Falciparum Homolog Of
Uridine PhosphorylasePURINE NUCLEOSIDE PHOSPHORYLASE
Length = 253
Score = 93.2 bits (230), Expect = 5e-18
Identities = 68/242 (28%), Positives = 121/242 (49%), Gaps = 19/242 (7%)
Query: 15 KLPKVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGAS 74
++ V +VVGDP R + +L RE+ + +K + L +SHG+G G +
Sbjct: 22 QITPVVLVVGDPGRVDKIKVVCDSYVDLAYN-REYKSVECHYKGQKFLCVSHGVGSAGCA 80
Query: 75 VCFEELIQAGVTTIIRAGTAGSFDP-RYREGSLVIATGAVRSDGVSEGLVPLGYPAISDH 133
VCFEEL Q G IIRAG+ GS P + G + I AVR D VS L+ +PA+ D
Sbjct: 81 VCFEELCQNGAKVIIRAGSCGSLQPDLIKRGDICICNAAVREDRVSHLLIHGDFPAVGDF 140
Query: 134 EVVGALIESAKS------NGLSNEQYGVGIITTVGHFFDGPLGNHNKLWARSKVLAIEME 187
+V L + A+ NG+S +++ ++ + + + + ++++ +E E
Sbjct: 141 DVYDTLNKCAQELNVPVFNGIS--------VSSDXYYPNKIIPSRLEDYSKANAAVVEXE 192
Query: 188 ASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAKRLS 247
+ L ++ +LR ++ G + +D F+ + E N V HQ +++AL A +L+
Sbjct: 193 LATLXVIGTLRKVKTGGILIVDGCPFKWD--EGDFDNNLVPHQ-LENXIKIALGACAKLA 249
Query: 248 SQ 249
++
Sbjct: 250 TK 251
>gi|56708383|ref|YP_170279.1| uridine phosphorylase [Francisella
tularensis subsp. tularensis Schu 4]
emb|CAG45959.1| uridine phosphorylase [Francisella tularensis subsp. tularensis
Schu 4]
Length = 267
Score = 92.4 bits (228), Expect = 9e-18
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 16/203 (7%)
Query: 19 VCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCFE 78
+ ++ GDP R++ +++ + + RE+ Y + ++V+S G+GG ++C E
Sbjct: 32 IAILPGDPKRSEYLAKMLDTDATFLASNREYTSYLAKVANQNVIVISTGMGGPSVAICIE 91
Query: 79 ELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVGA 138
EL GV IR GT G+ G L+++T +VR DG S P+ YPA++ + +
Sbjct: 92 ELAMIGVKKFIRVGTCGAIQENIEIGDLILSTASVRLDGTSYHYAPIEYPAVASFSLNTS 151
Query: 139 LIESAKSNGLSNEQYGVGIITTVGHFFDGPLGNHN-------------KLWARSKVLAIE 185
L SA++ N++ GI + FF G N W + VL E
Sbjct: 152 LYRSAQT---LNKKIHCGITGSSDTFFPGQDRKDNYSGYIRRHFINSLNEWRKLNVLNFE 208
Query: 186 MEASILFIVASLRGIRAGACVNI 208
ME+S LF V + G+ A +
Sbjct: 209 MESSALFTVCATFGLEASCLCTV 231
>gi|54113565|gb|AAV29416.1| NT02FT0422 [synthetic construct]
Length = 267
Score = 92.4 bits (228), Expect = 9e-18
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 16/203 (7%)
Query: 19 VCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCFE 78
+ ++ GDP R++ +++ + + RE+ Y + ++V+S G+GG ++C E
Sbjct: 32 IAILPGDPKRSEYLAKMLDTDATFLASNREYTSYLAKVANQNVIVISTGMGGPSVAICIE 91
Query: 79 ELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVGA 138
EL GV IR GT G+ G L+++T +VR DG S P+ YPA++ + +
Sbjct: 92 ELAMIGVKKFIRVGTCGAIQENIEIGDLILSTASVRLDGTSYHYAPIEYPAVASFSLNTS 151
Query: 139 LIESAKSNGLSNEQYGVGIITTVGHFFDGPLGNHN-------------KLWARSKVLAIE 185
L SA++ N++ GI + FF G N W + VL E
Sbjct: 152 LYRSAQT---LNKKIHCGITGSSDTFFPGQDRKDNYSGYIRRHFINSLNEWRKLNVLNFE 208
Query: 186 MEASILFIVASLRGIRAGACVNI 208
ME+S LF V + G+ A +
Sbjct: 209 MESSALFTVCATFGLEASCLCTV 231
>gi|37675871|ref|NP_936267.1| uridine phosphorylase [Vibrio
vulnificus YJ016]
dbj|BAC96237.1| uridine phosphorylase [Vibrio vulnificus YJ016]
Length = 242
Score = 92.0 bits (227), Expect = 1e-17
Identities = 62/226 (27%), Positives = 109/226 (47%), Gaps = 10/226 (4%)
Query: 21 VVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGASVCFEEL 80
+V G+P+RA ++ EL+ RE+ + G ++ + V S GIG + EEL
Sbjct: 19 IVCGEPDRANRIAAL-LENAELIAENREYRLFNGEFQGKAITVCSTGIGAPSMIIAVEEL 77
Query: 81 IQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEVVGALI 140
Q G IIR G+AG+ P G L++A GAVR +G S+ + YPA + ++ L
Sbjct: 78 KQCGAKYIIRVGSAGAMQPNIALGELIVAEGAVRDEGGSKAYIDAAYPAYASFSLLKGLD 137
Query: 141 ESAKSNGLSNEQYGVGIITTVGHFFDGPLGNHNKLWARSKVLAIEMEASILFIVASLRGI 200
++ + Y +G++ + F+ + W + +L +ME S L V LRG+
Sbjct: 138 GYLQTQAV---PYHMGVVRSHDSFYTDDEETLCQYWNKKGILGADMETSALLTVGRLRGL 194
Query: 201 RAGACVNIDNYI-FEREISE---KYEPNRDVVHQGTFKMLEVALDA 242
+ +N N + +++++ E +Y + D + G + AL A
Sbjct: 195 HVASVLN--NVVRYQQDVKEGVSQYVNDDDAMMAGEKRASLAALTA 238
>gi|23126846|ref|ZP_00108730.1| COG2820: Uridine phosphorylase
[Nostoc punctiforme PCC 73102]
Length = 257
Score = 90.9 bits (224), Expect = 3e-17
Identities = 68/245 (27%), Positives = 120/245 (48%), Gaps = 24/245 (9%)
Query: 17 PKVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKD-TEMLVMSHGIGGGGASV 75
P++ ++ G+P R+ L+++ +F L+ R + Y G + +L + G+G S+
Sbjct: 21 PRIALLSGEPERSHLIAQTYFQDVRLLSENRGLNSYVGYLPNGRSILSATSGMGAPSLSI 80
Query: 76 CFEELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHEV 135
ELIQ G+ IIR GT G+ P GS+VI++ A+ G + + P+ YPA +D +
Sbjct: 81 VVNELIQVGIRQIIRIGTCGAIQPYIPVGSVVISSAALCRQGAANDIAPVEYPAAADPFL 140
Query: 136 VGALIESAKSNGLSNEQYGVGIITTVGHFFDG-------------PLGNHNKLWARSKVL 182
AL+++A+ L E Y +GI +V F++G L + + R +L
Sbjct: 141 TVALVKAARE--LKVEHY-IGITASVDTFYEGQERTDSANPNLMRSLHGITEEYRRLNIL 197
Query: 183 AIEMEASILFIVASLRGIRAGACVNIDNYIFEREISEK-YEPNRDVVHQGTFKMLEVALD 241
EME+ LF +A + A A + + R +SE RD+ + + +A++
Sbjct: 198 NYEMESGTLFKMAGVYNFAAAAVCGV---VAGRTVSENIILEQRDIAVKNA---IAIAVN 251
Query: 242 AAKRL 246
AA +L
Sbjct: 252 AAAKL 256
>gi|34105004|gb|AAQ61360.1| purine nucleoside phosphorylase
[Chromobacterium violaceum ATCC 12472]
ref|NP_903368.1| purine nucleoside phosphorylase [Chromobacterium violaceum ATCC
12472]
Length = 236
Score = 89.4 bits (220), Expect = 8e-17
Identities = 74/236 (31%), Positives = 120/236 (50%), Gaps = 13/236 (5%)
Query: 14 GKLPKVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGA 73
G + ++ GDP RA+L++E ELV VR Y G +K + VM+HG+G A
Sbjct: 11 GAFAETVLMPGDPLRAQLIAETFLEGAELVTNVRNVFGYTGTYKGKRLSVMAHGMGIPSA 70
Query: 74 SVCFEELIQ-AGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSE-GLVPLGYPAIS 131
S+ ELI+ GV IIR G+ G+ P + L +A GA V+ Y AI+
Sbjct: 71 SIYTTELIKDYGVKNIIRIGSCGAVTPDIKLRELFVAMGASTDSKVNRMRFNDHDYAAIA 130
Query: 132 DHEVVGALIESAKSNGLSNEQYGVGIITTVGHFFDGPLGNHNKLWARSKVLAIEMEASIL 191
D+ ++ ++++A G ++ VG + + F+ G N + ++ +V IEME + +
Sbjct: 131 DYTLLRTVVDTAAEQG---KKVTVGNVFSADLFY-GVQPNMLDVLSKLQVNVIEMELAGI 186
Query: 192 FIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFK-MLEVALDAAKRL 246
+ VA+ G RA + + + I E + E Q +F+ M+EVALDAA +L
Sbjct: 187 YSVAAQYGARAVGILTVSDIIPTGEATSAEE------RQTSFRDMMEVALDAAIKL 236
>gi|24371692|ref|NP_715734.1| purine nucleoside phosphorylase
[Shewanella oneidensis MR-1]
gb|AAN53179.1| purine nucleoside phosphorylase [Shewanella oneidensis MR-1]
Length = 236
Score = 89.0 bits (219), Expect = 1e-16
Identities = 67/235 (28%), Positives = 117/235 (49%), Gaps = 11/235 (4%)
Query: 14 GKLPKVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGA 73
G K ++ GDP RAKL++E + + V VR + G +K ++ +M HG+G A
Sbjct: 11 GDFAKTIIMSGDPLRAKLIAETYLEDVKEVTNVRGILGFTGKYKSKDISIMGHGMGAPSA 70
Query: 74 SVCFEELIQA-GVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSE-GLVPLGYPAIS 131
S+ F EL+ GV IR G+ G+ L++A GA ++ + AI+
Sbjct: 71 SIYFHELMATYGVKNFIRVGSCGAISDNIHLKDLIVAMGASTDSKINRIRFLDHDLAAIA 130
Query: 132 DHEVVGALIESAKSNGLSNEQYGVGIITTVGHFFDGPLGNHNKLWARSKVLAIEMEASIL 191
+++++ A IE K+ ++ Y VG + + F+ P N L A+ VL +EME + L
Sbjct: 131 NYDLLQACIEVLKTTTVN---YKVGNVFSSDLFY-RPNENDYTLMAKYGVLGVEMEVNAL 186
Query: 192 FIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALDAAKRL 246
+ +A+ RA A + ++I + E E D+ +M++VAL+ A ++
Sbjct: 187 YALAAEHQCRALALCTVTDHIVQHEHLTADERRTDL-----HEMVKVALETAIKI 236
>gi|54308624|ref|YP_129644.1| putative uridine phosphorylase
[Photobacterium profundum SS9]
emb|CAG19842.1| putative uridine phosphorylase [Photobacterium profundum]
Length = 251
Score = 87.8 bits (216), Expect = 2e-16
Identities = 59/212 (27%), Positives = 103/212 (47%), Gaps = 10/212 (4%)
Query: 15 KLPKVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGAS 74
++ K +V G+P+R ++ V E++ RE+ G + D + + S GIG A
Sbjct: 13 QIAKRVIVCGEPDRVNRIAALLDGV-EIIAENREYRLMNGRFNDQLITICSTGIGAPSAI 71
Query: 75 VCFEELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGYPAISDHE 134
+ EEL GV +IR G++G+ G L++A AVR DG S+ V +PA +D
Sbjct: 72 IALEELNLCGVKQVIRVGSSGALQVNIALGDLIVAEAAVRDDGGSKAYVSSAFPAYADRH 131
Query: 135 VVGALIESAKSNGLSNE-------QYGVGIITTVGHFFDGPLGNHNKLWARSKVLAIEME 187
++ A +E+ + L+ Q G++ + F+ + W VL +ME
Sbjct: 132 LI-AKMEAYLNRSLTMPNTEQHVGQVHYGVVRSHDSFYTDNEAQLCQHWHEKGVLGADME 190
Query: 188 ASILFIVASLRGIRAGACVNIDNYIFEREISE 219
S L V LRG++ + +N + +FE+++ E
Sbjct: 191 TSALLTVGKLRGMQVASILN-NVVLFEQDVQE 221
>gi|15921217|ref|NP_376886.1| hypothetical 5'-methylthioadenosine
phosphorylase [Sulfolobus tokodaii str. 7]
dbj|BAB65995.1| 237aa long hypothetical 5'-methylthioadenosine phosphorylase
[Sulfolobus tokodaii str. 7]
Length = 237
Score = 86.7 bits (213), Expect = 5e-16
Identities = 70/234 (29%), Positives = 112/234 (46%), Gaps = 15/234 (6%)
Query: 14 GKLPKVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGA 73
G + + ++ GDP+R K +S K +LV R F Y G +K + + +HGIGG
Sbjct: 11 GDIAEKVIIAGDPSRVKSLS-KFLEEPQLVNENRGFLIYTGKYKGERISIATHGIGGPSI 69
Query: 74 SVCFEELIQAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLGY------ 127
++ EEL G IR GT+G+ P G VI TGA + LV +
Sbjct: 70 AIVLEELTMLGGRIFIRYGTSGALVPEVNIGDYVIVTGASYN---PSSLVYQYFKEQACV 126
Query: 128 PAISDHEVVGALIESAKSNGLSNEQYGVGIITTVGHFFDGPLGNHNKLWARSKVLAIEME 187
A D E+ AL S K+ GL ++ +G + + F+ + K W+ +A+EME
Sbjct: 127 SATPDFEITMALYNSFKNKGL---KFHLGNVFSSDAFY-AEDEDFAKKWSERGNIAVEME 182
Query: 188 ASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFKMLEVALD 241
+ LF+++ LR IR+GA V I + + + K E + V G +L+ ++
Sbjct: 183 CATLFMLSKLRKIRSGAVVIISDSLVKGGWISKDELEKK-VSDGAIAILDALIN 235
>gi|9656915|gb|AAF95490.1| purine nucleoside phosphorylase [Vibrio
cholerae O1 biovar eltor str. N16961]
ref|NP_231977.1| purine nucleoside phosphorylase [Vibrio cholerae O1 biovar eltor
str. N16961]
pir||C82087 purine nucleoside phosphorylase VC2347 [imported] - Vibrio cholerae
(strain N16961 serogroup O1)
Length = 241
Score = 85.1 bits (209), Expect = 1e-15
Identities = 72/240 (30%), Positives = 120/240 (50%), Gaps = 13/240 (5%)
Query: 6 TPICLLPIGKLPKVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMS 65
TP +G V ++ GDP RAK ++E VC VR Y G +K ++ VM
Sbjct: 3 TPHINAQMGDFADVVLMPGDPLRAKYIAENFLDNAVQVCDVRNMFGYTGTYKGRKISVMG 62
Query: 66 HGIGGGGASVCFEELIQ-AGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSE-GLV 123
HG+G S+ ELI+ GV IIR G+ G+ + + +VI GA V+
Sbjct: 63 HGMGIPSCSIYVTELIKDYGVKKIIRVGSCGAVNEGIKVRDVVIGMGACTDSKVNRIRFK 122
Query: 124 PLGYPAISDHEVVGALIESAKSNGLSNEQYGVGIITTVGHFFDGPLGNHNKLWARSKVLA 183
+ AI+D+++V A E+AK+ G+ + VG + + F+ P + + + ++
Sbjct: 123 DHDFAAIADYKMVKAAEEAAKARGIDVK---VGNLFSAELFYT-PDPSMFDVMDKYGIVG 178
Query: 184 IEMEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTF-KMLEVALDA 242
+EMEA+ ++ VA+ G +A A + ++I E + E Q TF +M+E+ALD+
Sbjct: 179 VEMEAAGIYGVAAEYGAKALAICTVSDHIKTGEQTTSEE------RQNTFNEMIEIALDS 232
>gi|40889963|pdb|1VHW|F Chain F, Crystal Structure Of Purine
Nucleoside Phosphorylase With Adenosine
pdb|1VHW|E Chain E, Crystal Structure Of Purine Nucleoside Phosphorylase With
Adenosine
pdb|1VHW|D Chain D, Crystal Structure Of Purine Nucleoside Phosphorylase With
Adenosine
pdb|1VHW|C Chain C, Crystal Structure Of Purine Nucleoside Phosphorylase With
Adenosine
pdb|1VHW|B Chain B, Crystal Structure Of Purine Nucleoside Phosphorylase With
Adenosine
pdb|1VHW|A Chain A, Crystal Structure Of Purine Nucleoside Phosphorylase With
Adenosine
pdb|1VHJ|F Chain F, Crystal Structure Of Purine Nucleoside Phosphorylase
pdb|1VHJ|E Chain E, Crystal Structure Of Purine Nucleoside Phosphorylase
pdb|1VHJ|D Chain D, Crystal Structure Of Purine Nucleoside Phosphorylase
pdb|1VHJ|C Chain C, Crystal Structure Of Purine Nucleoside Phosphorylase
pdb|1VHJ|B Chain B, Crystal Structure Of Purine Nucleoside Phosphorylase
pdb|1VHJ|A Chain A, Crystal Structure Of Purine Nucleoside Phosphorylase
Length = 253
Score = 84.7 bits (208), Expect = 2e-15
Identities = 72/240 (30%), Positives = 119/240 (49%), Gaps = 13/240 (5%)
Query: 6 TPICLLPIGKLPKVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMS 65
TP +G V ++ GDP RAK ++E VC VR Y G +K + VM
Sbjct: 5 TPHINAQMGDFADVVLMPGDPLRAKYIAENFLDNAVQVCDVRNMFGYTGTYKGRRISVMG 64
Query: 66 HGIGGGGASVCFEELIQ-AGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSE-GLV 123
HG+G S+ ELI+ GV IIR G+ G+ + + +VI GA V+
Sbjct: 65 HGMGIPSCSIYVTELIKDYGVKKIIRVGSCGAVNEGIKVRDVVIGMGACTDSKVNRIRFK 124
Query: 124 PLGYPAISDHEVVGALIESAKSNGLSNEQYGVGIITTVGHFFDGPLGNHNKLWARSKVLA 183
+ AI+D+++V A E+AK+ G+ + VG + + F+ P + + + ++
Sbjct: 125 DHDFAAIADYKMVKAAEEAAKARGIDVK---VGNLFSAELFYT-PDPSMFDVMDKYGIVG 180
Query: 184 IEMEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTF-KMLEVALDA 242
+EMEA+ ++ VA+ G +A A + ++I E + E Q TF +M+E+ALD+
Sbjct: 181 VEMEAAGIYGVAAEYGAKALAICTVSDHIKTGEQTTSEE------RQNTFNEMIEIALDS 234
>gi|56420115|ref|YP_147433.1| purine-nucleoside phosphorylase
[Geobacillus kaustophilus HTA426]
dbj|BAD75865.1| purine-nucleoside phosphorylase [Geobacillus kaustophilus HTA426]
Length = 236
Score = 83.2 bits (204), Expect = 6e-15
Identities = 74/237 (31%), Positives = 117/237 (49%), Gaps = 18/237 (7%)
Query: 14 GKLPKVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGA 73
G++ + ++ GDP RAK ++E VR + G +K + V G+G
Sbjct: 10 GEIAERILLPGDPLRAKYIAETFLEGAVCYNEVRGMLGFTGTYKGERISVQGTGMGVPSI 69
Query: 74 SVCFEELIQA-GVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVPLG--YPAI 130
S+ ELIQ+ GV T+IR GT G+ P R +++A A +D L+ G Y
Sbjct: 70 SIYVNELIQSYGVKTLIRVGTCGAIQPDVRVRDVILAMSA-STDSNMNRLIFRGRDYAPT 128
Query: 131 SDHEVVGALIESAKSNGLSNEQYGVGIITTVGHFF-DGPLGNHNKLWARSKVLAIEMEAS 189
+D ++ E GL+ + VG + T F+ D P + + WAR VLA+EME +
Sbjct: 129 ADFHLLRTAYEVGVEKGLALK---VGNVFTADMFYNDEP---NWETWARYGVLAVEMETA 182
Query: 190 ILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTF-KMLEVALDAAKR 245
L+ +A+ G RA + + + ++I E + E Q TF +M+EVAL+AA R
Sbjct: 183 ALYTLAAKFGCRALSVLTVSDHILTGEETTAEE------RQMTFNEMIEVALEAAIR 233
>gi|33148255|gb|AAP95775.1| purine nucleoside phosphorylase
[Haemophilus ducreyi 35000HP]
ref|NP_873386.1| purine nucleoside phosphorylase [Haemophilus ducreyi 35000HP]
Length = 238
Score = 81.6 bits (200), Expect = 2e-14
Identities = 68/241 (28%), Positives = 118/241 (48%), Gaps = 13/241 (5%)
Query: 5 VTPICLLPIGKLPKVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVM 64
+TP P G V ++ GDP RAK ++E E V VR Y G +K + +M
Sbjct: 1 MTPHINAPAGAFADVVLMPGDPLRAKYIAETFLENAEQVTNVRNMFGYTGTYKGRRISIM 60
Query: 65 SHGIGGGGASVCFEELI-QAGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSE-GL 122
HG+G S+ +ELI + GV IIR G+ G+ + +VI +GA V+
Sbjct: 61 GHGMGIPSCSIYAKELITEYGVKKIIRVGSCGAVRADVKLRDIVIGSGACTDSKVNRIRF 120
Query: 123 VPLGYPAISDHEVVGALIESAKSNGLSNEQYGVGIITTVGHFFDGPLGNHNKLWARSKVL 182
+ AI+D E+ A + AK +S + VG + + F+ + + + + +L
Sbjct: 121 RDNDFAAIADFEMTLAAYQVAKQKNISVQ---VGNLFSADLFYTPDVAMFD-VMEKYGIL 176
Query: 183 AIEMEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTF-KMLEVALD 241
+EMEA+ +++VA+ G+++ A + ++I E + Q TF +M+E+AL+
Sbjct: 177 GVEMEAAGIYVVAAEYGVKSLAICTVSDHIRSGEKLSAED------RQLTFNEMIEIALE 230
Query: 242 A 242
+
Sbjct: 231 S 231
>gi|23099800|ref|NP_693266.1| purine nucleoside phosphorylase
[Oceanobacillus iheyensis HTE831]
dbj|BAC14301.1| purine nucleoside phosphorylase [Oceanobacillus iheyensis HTE831]
Length = 235
Score = 81.6 bits (200), Expect = 2e-14
Identities = 68/232 (29%), Positives = 113/232 (48%), Gaps = 14/232 (6%)
Query: 14 GKLPKVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGA 73
G++ ++ GDP RAK ++E +L VR + Y G +K + V G+G
Sbjct: 10 GEIADKILLPGDPLRAKYIAETFLEEPKLYNEVRGMYGYTGTYKGERVSVQGTGMGVPSI 69
Query: 74 SVCFEELIQA-GVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLV--PLGYPAI 130
S+ ELIQ+ V +IR GT G+ +++A GA +D L+ + Y I
Sbjct: 70 SIYVNELIQSYDVKKLIRVGTCGAIQKDVNVRDVILAQGAT-TDSQMNRLIFNGIDYAPI 128
Query: 131 SDHEVVGALIESAKSNGLSNEQYGVGIITTVGHFFDGPLGNHNKLWARSKVLAIEMEASI 190
+D E++ ++ GL VG + T F+ N+L A+ +VLAIEME++
Sbjct: 129 ADFELLKNAYDAGVDKGL---HLRVGNVFTSDTFYRDNAQQVNELLAKYQVLAIEMESTA 185
Query: 191 LFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTFK-MLEVALD 241
L+ +A+ G +A + + + ++I E + E Q TF M+E+ALD
Sbjct: 186 LYTLAAKYGRQALSVLTVSDHIITGEETTAEE------RQTTFNDMMEIALD 231
>gi|56459285|ref|YP_154566.1| Purine-nucleoside phosphorylase
[Idiomarina loihiensis L2TR]
gb|AAV81017.1| Purine-nucleoside phosphorylase [Idiomarina loihiensis L2TR]
Length = 236
Score = 81.3 bits (199), Expect = 2e-14
Identities = 56/209 (26%), Positives = 104/209 (48%), Gaps = 6/209 (2%)
Query: 6 TPICLLPIGKLPKVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMS 65
TP G ++C+ GDP RA+ ++E H EL+ R + G ++ T + VM
Sbjct: 3 TPHISAKAGDFAELCLFPGDPLRARHIAETHLDSAELISDTRNMLAFTGQFRGTPVSVMG 62
Query: 66 HGIGGGGASVCFEELIQ-AGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLV- 123
G+G ++ +EL Q GV ++R GT G+ LV+A GA +++ L
Sbjct: 63 SGMGMPSCALYAQELFQHFGVERLVRVGTCGAVSANLNLRDLVVAQGACTDSSMNQKLFG 122
Query: 124 PLGYPAISDHEVVGALIESAKSNGLSNEQYGVGIITTVGHFFDGPLGNHNKLWARSKVLA 183
+ AI+D++++ + + N++ VG + + F+ ++L A + VLA
Sbjct: 123 GYDFAAIADYKLLSEFVGYCQK---KNQRVAVGNVFSTDSFYHPDKKLESRLEAMN-VLA 178
Query: 184 IEMEASILFIVASLRGIRAGACVNIDNYI 212
++MEA+ L+ VA++ +A A + + + I
Sbjct: 179 LDMEAAALYAVAAIHKKQALAVMTVSDEI 207
>gi|18145060|dbj|BAB81104.1| probable purine nucleoside
phosphorylase [Clostridium perfringens str. 13]
ref|NP_562314.1| probable purine nucleoside phosphorylase [Clostridium perfringens
str. 13]
Length = 235
Score = 80.9 bits (198), Expect = 3e-14
Identities = 69/234 (29%), Positives = 111/234 (46%), Gaps = 15/234 (6%)
Query: 14 GKLPKVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGA 73
G++ + ++ GDP RAK ++E VR Y G +K + V G+G
Sbjct: 10 GQIAETILLPGDPLRAKFIAETFLENPVCYNEVRGMLGYTGTYKGKRISVQGTGMGVPSI 69
Query: 74 SVCFEELIQA-GVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSE-GLVPLGYPAIS 131
S+ ELI+ GV +IR GTAG + LV+A + +++ L + +
Sbjct: 70 SIYVNELIRDYGVKNLIRVGTAGGMQEDIKVRDLVLAMSSHTDSAINKVRFNGLDFAPTA 129
Query: 132 DHEVVGALIESAKSNGLSNEQYGVGIITTVGHFF-DGPLGNHNKLWARSKVLAIEMEASI 190
+++ A ++A G S + VG + T F+ D P K WA+ LA+EME +
Sbjct: 130 SFKLLKAAYDTAVEKGYSPK---VGSVFTADSFYNDNP--EAWKQWAKFGTLAVEMETAA 184
Query: 191 LFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTF-KMLEVALDAA 243
L+ +A+ G+ A + I +++ E + E Q TF KM+EVALDAA
Sbjct: 185 LYTLAAKYGVNALTILTISDHLITAEETTSEE------RQTTFTKMMEVALDAA 232
>gi|54307836|ref|YP_128856.1| putative purine nucleoside
phosphorylase [Photobacterium profundum SS9]
emb|CAG19054.1| putative purine nucleoside phosphorylase [Photobacterium profundum]
Length = 241
Score = 80.5 bits (197), Expect = 4e-14
Identities = 71/242 (29%), Positives = 119/242 (48%), Gaps = 17/242 (7%)
Query: 6 TPICLLPIGKLPKVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMS 65
TP +G V ++ GDP RAK ++E + VC VR Y G +K ++ VM
Sbjct: 3 TPHINAEMGDFADVVLMPGDPLRAKYIAETFLQDVKEVCNVRSMFGYTGTYKGRKISVMG 62
Query: 66 HGIGGGGASVCFEELIQ-AGVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLVP 124
HG+G S+ ELI+ GV IIR G+ G+ + +VI GA V+ +
Sbjct: 63 HGMGIPSCSIYATELIKDFGVKKIIRVGSCGAVRDDVKLRDVVIGMGASTDSKVNR--IR 120
Query: 125 LG---YPAISDHEVVGALIESAKSNGLSNEQYGVGIITTVGHFFDGPLGNHNKLWARSKV 181
G + AI+D +V +++AK+ G+ + VG I + F++ P K + +
Sbjct: 121 FGGHDFAAIADFGMVQNAVDAAKAKGIPVK---VGNIFSADLFYN-PDFEFFKTMDKYGI 176
Query: 182 LAIEMEASILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQGTF-KMLEVAL 240
+ +EMEA+ ++ VA+ G +A + ++I E + E Q TF +M+E+AL
Sbjct: 177 VGVEMEAAGIYGVAAEFGAKALTICTVSDHILRGEATTSEE------RQLTFNEMMEIAL 230
Query: 241 DA 242
++
Sbjct: 231 ES 232
>gi|53771223|ref|ZP_00181950.2| COG0813: Purine-nucleoside
phosphorylase [Exiguobacterium sp. 255-15]
Length = 235
Score = 80.5 bits (197), Expect = 4e-14
Identities = 69/238 (28%), Positives = 116/238 (47%), Gaps = 17/238 (7%)
Query: 14 GKLPKVCVVVGDPNRAKLVSEKHFVVTELVCAVREFHCYKGMWKDTEMLVMSHGIGGGGA 73
G++ + ++ GDP RAK +++ L VR + + G +K ++ V G+G
Sbjct: 10 GQIAETVLLPGDPLRAKYIADTFLEDVVLYNEVRGMYGFTGTYKGKKVSVQGTGMGVPSM 69
Query: 74 SVCFEELIQA-GVTTIIRAGTAGSFDPRYREGSLVIATGAVRSDGVSEGLV---PLGYPA 129
S+ EL+Q+ G +IR GTAG P + +VIA A S +++ V L Y
Sbjct: 70 SIYANELVQSYGAKNLIRVGTAGGITPDVKVRDVVIAMSA--SHDMAQNRVRFNGLDYAP 127
Query: 130 ISDHEVVGALIESAKSNGLSNEQYGVGIITTVGHFFDGPLGNHNKLWARSKVLAIEMEAS 189
+ +++ +AK +G+ + VG I T F+ +H K WA LAIEMEA+
Sbjct: 128 TASFDLLHKAYMTAKEHGIDAK---VGQIFTTDQFYQDDF-HHFKKWADFGCLAIEMEAA 183
Query: 190 ILFIVASLRGIRAGACVNIDNYIFEREISEKYEPNRDVVHQ