Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DDB0219313
(775 letters)
Database: /home/dicty1/resource/WorkingDBs//nr-clean
2,329,665 sequences; 788,375,511 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|23485740|gb|EAA20550.1| hypothetical protein [Plasmodium yoel... 43 0.032
>gi|23485740|gb|EAA20550.1| hypothetical protein [Plasmodium yoelii
yoelii]
Length = 746
Score = 43.1 bits (100), Expect = 0.032
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 134 NDLPNVKNDE----DNVISAFDYIITDFIRENMTKLSNNSFKCQIDSMMFSSEKQLIDHM 189
+D+ N KNDE DN + + EN K+ N+ F I +FS EK+++ +
Sbjct: 192 SDINNTKNDELNKGDNKLMIVFKDDCNINEENKNKILNH-FINNIKLHLFSEEKEVLIGI 250
Query: 190 KEDHKSLIFSTISLLIDDNETSYMGNFFTKLMYSDSFYS 228
++ + + +S+L +N SY+ NFF K M+ FY+
Sbjct: 251 QKTYNKIYDKKMSILSINNSLSYISNFFFK-MHEPDFYN 288
Database: /home/dicty1/resource/WorkingDBs//nr-clean
Posted date: Mar 10, 2005 12:10 PM
Number of letters in database: 788,375,511
Number of sequences in database: 2,329,665
Lambda K H
0.316 0.132 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 520,349,584
Number of Sequences: 2329665
Number of extensions: 16027506
Number of successful extensions: 51586
Number of sequences better than 1.0: 1
Number of HSP's better than 1.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 51586
Number of HSP's gapped (non-prelim): 1
length of query: 775
length of database: 788,375,511
effective HSP length: 135
effective length of query: 640
effective length of database: 473,870,736
effective search space: 303277271040
effective search space used: 303277271040
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 88 (38.5 bits)
BLASTP 2.2.1 [Jul-12-2001]