Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DDB0217915
(686 letters)
Database: /home/dicty1/resource/WorkingDBs//nr-clean
2,329,665 sequences; 788,375,511 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|48095891|ref|XP_394546.1| similar to Cysteine and glycine-ric... 49 4e-04
gi|3080533|emb|CAA18661.1| SPBC13G1.08c [Schizosaccharomyces pom... 41 0.14
gi|20129591|ref|NP_609889.1| CG10414-PA [Drosophila melanogaster... 39 0.52
>gi|48095891|ref|XP_394546.1| similar to Cysteine and glycine-rich
protein 2 binding protein [Apis mellifera]
Length = 478
Score = 49.3 bits (116), Expect = 4e-04
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 287 YFHLRDDIYEFISVHWDVICKR--ERIQNWKHTIGMTLSHYQNL-FQNGYPIFQNTGYWC 343
YFH + DI F+ +WD + K+ +R +NW TI TLSHY + F++G +G+W
Sbjct: 114 YFHWKSDISTFVDRNWDFLFKKTVKRKKNWIGTISGTLSHYSGIFFKSGTTELGESGWWR 173
Query: 344 LKDD 347
L D+
Sbjct: 174 LIDN 177
>gi|3080533|emb|CAA18661.1| SPBC13G1.08c [Schizosaccharomyces pombe]
pir||T39409 hypothetical protein SPBC13G1.08c - fission yeast
(Schizosaccharomyces pombe)
ref|NP_596557.1| ash2-trithorax family protein [Schizosaccharomyces pombe]
Length = 652
Score = 40.8 bits (94), Expect = 0.14
Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 20/120 (16%)
Query: 221 LLCKTPDC-----------IVCENGPPPCLEKGQ--VPIWAQILHVALFALTESSKISQS 267
L C +P C VC++ E+ + V W I A+ L + +
Sbjct: 67 LSCLSPPCTSMMGFSTNYQFVCKHCTEDGFERFERGVSAWKAITATAMANLVVKRYVETN 126
Query: 268 KFPNTVTDKCNT----HFPNGKRYFHLRDDIYEFISVHWDVIC-KRERIQNWKHTIGMTL 322
P+ D N +F +F ++D+ FI HW ++C RE++Q W+ T+G L
Sbjct: 127 --PDVPVDSFNAEKMRNFQANTYFFKKKEDLIPFIEEHWQLLCPDREKVQTWQATLGSCL 184
>gi|20129591|ref|NP_609889.1| CG10414-PA [Drosophila melanogaster]
gb|AAF53681.1| CG10414-PA [Drosophila melanogaster]
gb|AAM49890.1| LD17982p [Drosophila melanogaster]
Length = 774
Score = 38.9 bits (89), Expect = 0.52
Identities = 20/61 (32%), Positives = 30/61 (48%), Gaps = 3/61 (4%)
Query: 287 YFHLRDDIYEFISVHWDVIC--KRERIQNWKHTIGMTLSHYQ-NLFQNGYPIFQNTGYWC 343
+FH R I F+ +W+ I R + W ++ LSH FQ+G +FQ G+W
Sbjct: 114 FFHWRTHIISFVDKNWNYIFGPNVRRRKQWTGSVSGALSHNSPEYFQSGLDVFQENGWWK 173
Query: 344 L 344
L
Sbjct: 174 L 174
Database: /home/dicty1/resource/WorkingDBs//nr-clean
Posted date: Mar 10, 2005 12:10 PM
Number of letters in database: 788,375,511
Number of sequences in database: 2,329,665
Lambda K H
0.317 0.134 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 531,219,738
Number of Sequences: 2329665
Number of extensions: 16325138
Number of successful extensions: 29245
Number of sequences better than 1.0: 3
Number of HSP's better than 1.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 29242
Number of HSP's gapped (non-prelim): 3
length of query: 686
length of database: 788,375,511
effective HSP length: 134
effective length of query: 552
effective length of database: 476,200,401
effective search space: 262862621352
effective search space used: 262862621352
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 87 (38.1 bits)
BLASTP 2.2.1 [Jul-12-2001]