Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DDB0217083
(657 letters)
Database: /home/dicty1/resource/WorkingDBs//nr-clean
2,329,665 sequences; 788,375,511 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|50756105|ref|XP_415019.1| PREDICTED: similar to CSRP2 binding... 49 5e-04
gi|57104046|ref|XP_534336.1| PREDICTED: similar to dJ717M23.1 (C... 49 6e-04
gi|55651135|ref|XP_514531.1| PREDICTED: similar to CSRP2 binding... 47 0.001
gi|13446190|emb|CAB56651.2| GD:CSRP2BP [Homo sapiens] 47 0.001
gi|24308203|ref|NP_065397.1| CSRP2 binding protein isoform a [Ho... 47 0.001
gi|31088884|ref|NP_852082.1| cysteine and glycine-rich protein 2... 47 0.002
gi|34858845|ref|XP_342531.1| similar to Cysteine-rich protein 2 ... 47 0.002
gi|58701939|gb|AAH90200.1| Unknown (protein for IMAGE:6868635) [... 42 0.044
gi|29570788|ref|NP_808779.1| CSRP2 binding protein isoform b [Ho... 41 0.13
gi|10435789|dbj|BAB14669.1| unnamed protein product [Homo sapiens] 41 0.13
gi|48095891|ref|XP_394546.1| similar to Cysteine and glycine-ric... 41 0.13
gi|58475892|gb|AAH90113.1| Unknown (protein for MGC:97722) [Xeno... 40 0.29
gi|13810443|dbj|BAB43943.1| polycomblike 2 [Xenopus laevis] 40 0.29
gi|47215978|emb|CAF96380.1| unnamed protein product [Tetraodon n... 39 0.64
>gi|50756105|ref|XP_415019.1| PREDICTED: similar to CSRP2 binding
protein isoform a; CRP2 binding protein; cysteine rich
protein 2 binding protein; CRP2 binding partner [Gallus
gallus]
Length = 781
Score = 48.9 bits (115), Expect = 5e-04
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Query: 95 CLICNKDSPPCLSSRSVSWVSILRVVFYSLKNLYPEKE-YFNLKKDVYGYVATHWSLICT 153
C C++D ++W ++ + Y+L ++ YF K+D+ ++ HW+ +
Sbjct: 105 CSDCSEDGKEQFERLRLTWQQVVMLAMYNLSLEGTGRQGYFRWKEDICAFIEKHWTFLLG 164
Query: 154 KKKKTPGWRKQLQDALSHCRRL-FESGADHHECYGFWKLKDMSDP 197
+KKT W + LS L F SGA G+WKL P
Sbjct: 165 NRKKTSTWWSTVAGCLSVGSPLYFRSGAQEFGEPGWWKLVHNKPP 209
>gi|57104046|ref|XP_534336.1| PREDICTED: similar to dJ717M23.1 (CRP2
binding protein (CRP2BP)) [Canis familiaris]
Length = 781
Score = 48.5 bits (114), Expect = 6e-04
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Query: 95 CLICNKDSPPCLSSRSVSWVSILRVVFYSLKNLYPEKE-YFNLKKDVYGYVATHWSLICT 153
C C++D ++W ++ + Y+L ++ YF K+D+ ++ HW+ +
Sbjct: 106 CSDCSEDGKEQYERLKLTWQQVVMLAMYNLSLEGSGRQGYFRWKEDICAFIEKHWTFLLG 165
Query: 154 KKKKTPGWRKQLQDALS-HCRRLFESGADHHECYGFWKLKDMSDP 197
+KKT W + LS F SGA G+WKL P
Sbjct: 166 NRKKTSTWWSTVAGCLSVGSPMFFRSGAQEFGEPGWWKLVHNKPP 210
>gi|55651135|ref|XP_514531.1| PREDICTED: similar to CSRP2 binding
protein isoform a; CRP2 binding protein; cysteine rich
protein 2 binding protein; CRP2 binding partner [Pan
troglodytes]
Length = 730
Score = 47.4 bits (111), Expect = 0.001
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Query: 95 CLICNKDSPPCLSSRSVSWVSILRVVFYSLKNLYPEKE-YFNLKKDVYGYVATHWSLICT 153
C C+ D ++W ++ + Y+L ++ YF K+D+ ++ HW+ +
Sbjct: 54 CSDCSADGKEQYERLKLTWQQVVMLAMYNLSLEGSGRQGYFRWKEDICAFIEKHWTFLLG 113
Query: 154 KKKKTPGWRKQLQDALS-HCRRLFESGADHHECYGFWKLKDMSDP 197
+KKT W + LS F SGA G+WKL P
Sbjct: 114 NRKKTSTWWSTVAGCLSVGSPMYFRSGAQEFGEPGWWKLVHNKPP 158
>gi|13446190|emb|CAB56651.2| GD:CSRP2BP [Homo sapiens]
Length = 781
Score = 47.4 bits (111), Expect = 0.001
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Query: 95 CLICNKDSPPCLSSRSVSWVSILRVVFYSLKNLYPEKE-YFNLKKDVYGYVATHWSLICT 153
C C+ D ++W ++ + Y+L ++ YF K+D+ ++ HW+ +
Sbjct: 106 CSDCSADGKEQYERLKLTWQQVVMLAMYNLSLEGSGRQGYFRWKEDICAFIEKHWTFLLG 165
Query: 154 KKKKTPGWRKQLQDALS-HCRRLFESGADHHECYGFWKLKDMSDP 197
+KKT W + LS F SGA G+WKL P
Sbjct: 166 NRKKTSTWWSTVAGCLSVGSPMYFRSGAQEFGEPGWWKLVHNKPP 210
>gi|24308203|ref|NP_065397.1| CSRP2 binding protein isoform a [Homo
sapiens]
gb|AAH07537.1| CSRP2 binding protein, isoform a [Homo sapiens]
sp|Q9H8E8|CS2B_HUMAN Cysteine-rich protein 2 binding protein (CSRP2 binding protein)
(CRP2BP) (CRP2 binding partner)
Length = 782
Score = 47.4 bits (111), Expect = 0.001
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Query: 95 CLICNKDSPPCLSSRSVSWVSILRVVFYSLKNLYPEKE-YFNLKKDVYGYVATHWSLICT 153
C C+ D ++W ++ + Y+L ++ YF K+D+ ++ HW+ +
Sbjct: 106 CSDCSADGKEQYERLKLTWQQVVMLAMYNLSLEGSGRQGYFRWKEDICAFIEKHWTFLLG 165
Query: 154 KKKKTPGWRKQLQDALS-HCRRLFESGADHHECYGFWKLKDMSDP 197
+KKT W + LS F SGA G+WKL P
Sbjct: 166 NRKKTSTWWSTVAGCLSVGSPMYFRSGAQEFGEPGWWKLVHNKPP 210
>gi|31088884|ref|NP_852082.1| cysteine and glycine-rich protein 2
binding protein [Mus musculus]
gb|AAH31563.1| Cysteine and glycine-rich protein 2 binding protein [Mus musculus]
Length = 779
Score = 47.0 bits (110), Expect = 0.002
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
Query: 95 CLICNKDSPPCLSSRSVSWVSILRVVFYSLKNLYPEKE-YFNLKKDVYGYVATHWSLICT 153
C C+ D ++W ++ + Y+L ++ YF K+D+ ++ HW+ +
Sbjct: 106 CCDCSADGKEQYERLKLTWQQVVMLAMYNLSLEGSGRQVYFRWKEDICAFIEKHWTFLLG 165
Query: 154 KKKKTPGWRKQLQDALSHCRRL-FESGADHHECYGFWKL 191
+KKT W + LS + F SGA G+WKL
Sbjct: 166 NRKKTSTWWSTVAGCLSVGSPVYFRSGAQEFGEPGWWKL 204
>gi|34858845|ref|XP_342531.1| similar to Cysteine-rich protein 2
binding protein [Rattus norvegicus]
Length = 804
Score = 46.6 bits (109), Expect = 0.002
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
Query: 95 CLICNKDSPPCLSSRSVSWVSILRVVFYSLKNLYPEKE-YFNLKKDVYGYVATHWSLICT 153
C C+ D ++W ++ + Y+L ++ YF K+D+ ++ HW+ +
Sbjct: 106 CADCSADGKEQSERLKLTWQQVVMLAMYNLSLEGSGRQGYFRWKEDICAFIEKHWTFLLG 165
Query: 154 KKKKTPGWRKQLQDALSHCRRL-FESGADHHECYGFWKL 191
+KKT W + LS + F SGA G+WKL
Sbjct: 166 NRKKTSTWWSTVAGCLSVGSPVYFRSGAQEFGEPGWWKL 204
>gi|58701939|gb|AAH90200.1| Unknown (protein for IMAGE:6868635)
[Xenopus laevis]
Length = 341
Score = 42.4 bits (98), Expect = 0.044
Identities = 28/94 (29%), Positives = 49/94 (51%), Gaps = 5/94 (5%)
Query: 94 ICLICNKDSPPCLSSRSVSWVSILRVVFYSLKNLYPEKEYFNLKKDVYGYVATHWSLICT 153
IC +CN P L S+ WV I + Y+L ++ +K+YF+ + ++ Y+ +W I
Sbjct: 248 ICSVCNS-GPEYLKRLSLRWVDIAHLSLYNLSVIH-KKKYFDSELELITYINDNWDRIQP 305
Query: 154 -KKKKTPGWRK--QLQDALSHCRRLFESGADHHE 184
+ TP + Q+ DAL+ + +F SG + E
Sbjct: 306 GELADTPRSERYEQILDALNENKTMFMSGKEKKE 339
>gi|29570788|ref|NP_808779.1| CSRP2 binding protein isoform b [Homo
sapiens]
gb|AAH09174.1| CSRP2 binding protein, isoform b [Homo sapiens]
Length = 654
Score = 40.8 bits (94), Expect = 0.13
Identities = 21/66 (31%), Positives = 30/66 (44%), Gaps = 1/66 (1%)
Query: 133 YFNLKKDVYGYVATHWSLICTKKKKTPGWRKQLQDALS-HCRRLFESGADHHECYGFWKL 191
YF K+D+ ++ HW+ + +KKT W + LS F SGA G+WKL
Sbjct: 17 YFRWKEDICAFIEKHWTFLLGNRKKTSTWWSTVAGCLSVGSPMYFRSGAQEFGEPGWWKL 76
Query: 192 KDMSDP 197
P
Sbjct: 77 VHNKPP 82
>gi|10435789|dbj|BAB14669.1| unnamed protein product [Homo sapiens]
Length = 654
Score = 40.8 bits (94), Expect = 0.13
Identities = 21/66 (31%), Positives = 30/66 (44%), Gaps = 1/66 (1%)
Query: 133 YFNLKKDVYGYVATHWSLICTKKKKTPGWRKQLQDALS-HCRRLFESGADHHECYGFWKL 191
YF K+D+ ++ HW+ + +KKT W + LS F SGA G+WKL
Sbjct: 17 YFRWKEDICAFIEKHWTFLLGNRKKTSTWWSTVAGCLSVGSPMYFRSGAQEFGEPGWWKL 76
Query: 192 KDMSDP 197
P
Sbjct: 77 VHNKPP 82
>gi|48095891|ref|XP_394546.1| similar to Cysteine and glycine-rich
protein 2 binding protein [Apis mellifera]
Length = 478
Score = 40.8 bits (94), Expect = 0.13
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Query: 95 CLICNKDSPPCLSSRSVSWVSILRVVFYSLKNL---YPEKEYFNLKKDVYGYVATHWSLI 151
C C+ + + W++++ + Y+L+ ++ YF+ K D+ +V +W +
Sbjct: 73 CSHCSPFGEETVIRNRMPWLNVIILTLYNLREKSSGISKRGYFHWKSDISTFVDRNWDFL 132
Query: 152 CTKK-KKTPGWRKQLQDALSHCRRL-FESGADHHECYGFWKLKDMSDP 197
K K+ W + LSH + F+SG G+W+L D P
Sbjct: 133 FKKTVKRKKNWIGTISGTLSHYSGIFFKSGTTELGESGWWRLIDNDPP 180
>gi|58475892|gb|AAH90113.1| Unknown (protein for MGC:97722) [Xenopus
tropicalis]
Length = 594
Score = 39.7 bits (91), Expect = 0.29
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 94 ICLICNKDSPPCLSSRSVSWVSILRVVFYSLKNLYPEKEYFNLKKDVYGYVATHWSLICT 153
IC +CN P L S+ WV I + Y+L ++ +K+YF+ + ++ Y+ +W I
Sbjct: 248 ICSVCNS-GPEYLKRLSLRWVDIAHLCLYNLSVIH-KKKYFDSELELITYINDNWDRIQP 305
Query: 154 -KKKKTPGWRK--QLQDALSHCRRLFESGAD 181
+ TP + + DAL+ + +F SG +
Sbjct: 306 GELADTPRSERYEHILDALNENKTMFMSGKE 336
>gi|13810443|dbj|BAB43943.1| polycomblike 2 [Xenopus laevis]
Length = 487
Score = 39.7 bits (91), Expect = 0.29
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 94 ICLICNKDSPPCLSSRSVSWVSILRVVFYSLKNLYPEKEYFNLKKDVYGYVATHWSLICT 153
IC +CN P L S+ WV I + Y+L ++ +K+YF+ + ++ Y+ +W I
Sbjct: 248 ICSVCNS-GPEYLKRLSLRWVDIAHLCLYNLSVIH-KKKYFDSELELITYINDNWDRIQP 305
Query: 154 -KKKKTPGWRK--QLQDALSHCRRLFESGAD 181
+ TP + + DAL+ + +F SG +
Sbjct: 306 GELADTPRSERYEHILDALNENKTMFMSGKE 336
>gi|47215978|emb|CAF96380.1| unnamed protein product [Tetraodon
nigroviridis]
Length = 1386
Score = 38.5 bits (88), Expect = 0.64
Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 94 ICLICNKDSPPCLSSRSVSWVSILRVVFYSLKNLYPEKEYFNLKKDVYGYVATHWSLI-- 151
IC +CN P L+ +SWV + + Y+L ++ +K+YF+ + + Y+ +W L+
Sbjct: 259 ICSVCNA-GPEYLTRLPLSWVDVTHLSLYNLSVIH-KKKYFDSEMHLMTYINDNWELLQL 316
Query: 152 --CTKKKKTPGWRKQLQDALSHCRRLFESGAD 181
T ++ + L +AL++ +F SG +
Sbjct: 317 GELTNTPRSERYENVL-EALNNNSNMFMSGKE 347
Database: /home/dicty1/resource/WorkingDBs//nr-clean
Posted date: Mar 10, 2005 12:10 PM
Number of letters in database: 788,375,511
Number of sequences in database: 2,329,665
Lambda K H
0.315 0.132 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 580,265,097
Number of Sequences: 2329665
Number of extensions: 17276866
Number of successful extensions: 44492
Number of sequences better than 1.0: 14
Number of HSP's better than 1.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 44491
Number of HSP's gapped (non-prelim): 14
length of query: 657
length of database: 788,375,511
effective HSP length: 134
effective length of query: 523
effective length of database: 476,200,401
effective search space: 249052809723
effective search space used: 249052809723
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 87 (38.1 bits)
BLASTP 2.2.1 [Jul-12-2001]