Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DDB0204282
         (611 letters)

Database: /home/dicty1/resource/WorkingDBs//nr-clean
           2,329,665 sequences; 788,375,511 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gi|6320091|ref|NP_010171.1| 2'-O-ribose methyltransferase, catal...    39  0.59

>gi|6320091|ref|NP_010171.1| 2'-O-ribose methyltransferase,
           catalyzes the ribose methylation of the guanosine
           nucleotide at position 18 of tRNAs [Saccharomyces
           cerevisiae]
 emb|CAA98680.1| unnamed protein product [Saccharomyces cerevisiae]
 pir||S67655 probable membrane protein YDL112w - yeast (Saccharomyces
           cerevisiae)
          Length = 1436

 Score = 38.5 bits (88), Expect = 0.59
 Identities = 47/197 (23%), Positives = 79/197 (39%), Gaps = 30/197 (15%)

Query: 117 FIIKFSQEAGDYDLYSKYAKVLIESI--DNPDKGELESIAKMVADFANRLLEADKSLNAI 174
           F+I+ ++   D  +Y+  A   +  +    P  G     A  +  + N  +   KS+N  
Sbjct: 606 FLIEVAKSKQDIPVYTSKAVTFLTQLLSGEPSNGYTYENATALLSYPNFTISTWKSINVN 665

Query: 175 DIIKSSMERYSFPDKVKVDLILSLASLYRNTPNXXXXXXXXXXXXXXXXXXXTTPTLIIN 234
           ++ KS ME++S  DK K       A +Y+ T                      T  L  N
Sbjct: 666 NLFKSVMEKFSL-DKFKF-----FAEIYQKT----------------YECRFDTIELNFN 703

Query: 235 SLITLYEYYSKEGNFEKMRETVSSVEEHLDPKYSVSIYKYLAESAKSYEHYEDYYSLVDK 294
            L++LYE   K  N +  RE+     +  D  YS S ++ L    K+Y    D     D 
Sbjct: 704 DLLSLYEMVKKSAN-QCSRESF----KVKDSAYS-SYFELLNTFLKTYALNRDSSEGNDD 757

Query: 295 LIGVLAKSEADPVNKEN 311
            + +L +   + +NK+N
Sbjct: 758 ELHILLRLVDENINKDN 774


  Database: /home/dicty1/resource/WorkingDBs//nr-clean
    Posted date:  Mar 10, 2005 12:10 PM
  Number of letters in database: 788,375,511
  Number of sequences in database:  2,329,665
  
Lambda     K      H
   0.313    0.131    0.353 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 632,264,026
Number of Sequences: 2329665
Number of extensions: 22771699
Number of successful extensions: 58076
Number of sequences better than  1.0: 1
Number of HSP's better than  1.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 58075
Number of HSP's gapped (non-prelim): 2
length of query: 611
length of database: 788,375,511
effective HSP length: 133
effective length of query: 478
effective length of database: 478,530,066
effective search space: 228737371548
effective search space used: 228737371548
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 86 (37.7 bits)
BLASTP 2.2.1 [Jul-12-2001]