Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DDB0202946
(1038 letters)
Database: /home/dicty1/resource/WorkingDBs//nr-clean
2,329,665 sequences; 788,375,511 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|49652901|emb|CAG85233.1| unnamed protein product [Debaryomyce... 41 0.17
gi|47214667|emb|CAG00903.1| unnamed protein product [Tetraodon n... 41 0.17
gi|48097570|ref|XP_393820.1| similar to ENSANGP00000014043 [Apis... 40 0.28
>gi|49652901|emb|CAG85233.1| unnamed protein product [Debaryomyces
hansenii CBS767]
ref|XP_457236.1| unnamed protein product [Debaryomyces hansenii]
Length = 835
Score = 41.2 bits (95), Expect = 0.17
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 879 EKTSESYLPQLLKKQSSDSFKLKEYQKHQISQLAQLESKIMSTNLEINPQLSKEKTIQNL 938
EK ES + LKK S+S + K + S+L + + N EI QLSK K+IQ++
Sbjct: 314 EKNPESVFFKTLKKMKSESPEDDIISKQKESELRRRIDEQKRIN-EIESQLSKSKSIQDI 372
Query: 939 KNNIQTLLNSQEELNKKL 956
+ I L NS+ E N +L
Sbjct: 373 EMEISELNNSRNEANDRL 390
>gi|47214667|emb|CAG00903.1| unnamed protein product [Tetraodon
nigroviridis]
Length = 1558
Score = 41.2 bits (95), Expect = 0.17
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 14/99 (14%)
Query: 855 DMIKLLNFQKYQSAILQNCQKTEIEKTSESYLPQLLKKQSSDSFKLKEYQKHQ-ISQLAQ 913
++++LL +K Q +TE+E E+ + ++ SS S L+E + HQ + +L Q
Sbjct: 974 EVVELLRQEKQQL-------RTELEDRMETMQSEFQQQLSSQSLSLQEERDHQLLVELQQ 1026
Query: 914 LESKIMSTNLEINPQLSKEKTIQNLKNNIQTLLNSQEEL 952
LE + + E+N S +L+ N+ ++ +QEEL
Sbjct: 1027 LEENLQKSKQELNQLKS------DLQENVDLMIENQEEL 1059
>gi|48097570|ref|XP_393820.1| similar to ENSANGP00000014043 [Apis
mellifera]
Length = 473
Score = 40.4 bits (93), Expect = 0.28
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 890 LKKQSSDSFKLKEYQKHQISQLAQLESKIMSTNLEINPQLSKEKTIQNLKNNIQTLLNSQ 949
L++Q +D+F +Y + I+ + + I S N +IN +L + I+ L N L +S
Sbjct: 129 LRQQHNDTFNNMDYSEKLINTITENNKNIESNNAKINNELEQSHNIKLLNVNDYNLNDSL 188
Query: 950 EELNKKL 956
E++N+KL
Sbjct: 189 EDINEKL 195
Database: /home/dicty1/resource/WorkingDBs//nr-clean
Posted date: Mar 10, 2005 12:10 PM
Number of letters in database: 788,375,511
Number of sequences in database: 2,329,665
Lambda K H
0.310 0.130 0.348
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 595,033,596
Number of Sequences: 2329665
Number of extensions: 15761704
Number of successful extensions: 56910
Number of sequences better than 1.0: 3
Number of HSP's better than 1.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 56909
Number of HSP's gapped (non-prelim): 3
length of query: 1038
length of database: 788,375,511
effective HSP length: 138
effective length of query: 900
effective length of database: 466,881,741
effective search space: 420193566900
effective search space used: 420193566900
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 89 (38.9 bits)
BLASTP 2.2.1 [Jul-12-2001]