Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DDB0202188
         (1127 letters)

Database: /home/dicty1/resource/WorkingDBs//nr-clean
           2,329,665 sequences; 788,375,511 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gi|2440198|emb|CAB16720.1| SPAC7D4.03c [Schizosaccharomyces pomb...    47  0.003
gi|49650872|emb|CAG77809.1| unnamed protein product [Yarrowia li...    44  0.037
gi|46097684|gb|EAK82917.1| hypothetical protein UM06288.1 [Ustil...    39  0.91

>gi|2440198|emb|CAB16720.1| SPAC7D4.03c [Schizosaccharomyces pombe]
 pir||T39081 hypothetical protein SPAC7D4.03c - fission yeast
           (Schizosaccharomyces pombe)
 ref|NP_593856.1| hypothetical protein; sequence orphan [Schizosaccharomyces pombe]
          Length = 886

 Score = 47.0 bits (110), Expect = 0.003
 Identities = 31/144 (21%), Positives = 64/144 (43%), Gaps = 6/144 (4%)

Query: 682 CRQDN-----IMDVMMKTIFLKTCVFDLPVVSTTLSLVECWLKEYGPLPDSFDINFFCEG 736
           CRQ+      +++ ++  +   T  F+L       SLVE     +      FD +F+   
Sbjct: 485 CRQEQMRLLAVLEQVLINVAKNTPAFNLQSCFLLCSLVEQCFGVFNDFSHRFDFSFWISV 544

Query: 737 IESIIVADHHQILIRALQMLYNTSECFQ-RNLRKVLFQDLLLNKYFYALFLHWDQPVRNA 795
            + +I   H+  ++R++  +Y        ++   V  Q LL    F  LFLHW   VR  
Sbjct: 545 AKRLISTSHNMSIVRSITFIYAVWPYLDIKSKELVTLQWLLEENTFQELFLHWSPLVRAY 604

Query: 796 YHHLLLYKMVRINRSKLYESGATL 819
           +  L+ ++ ++++  + ++   T+
Sbjct: 605 FQRLVCWRFLKLDDMEEFQFKGTV 628


>gi|49650872|emb|CAG77809.1| unnamed protein product [Yarrowia
           lipolytica CLIB99]
 ref|XP_505002.1| hypothetical protein [Yarrowia lipolytica]
          Length = 1135

 Score = 43.5 bits (101), Expect = 0.037
 Identities = 56/243 (23%), Positives = 94/243 (38%), Gaps = 30/243 (12%)

Query: 602 IPQG-WIDNLARKES-VFFIFFKDWLTSCKYVLGETV--DMKTVPGFFTIAYALLHEIKT 657
           IP G WI   A   S  F+ F K +     Y +G  +  D +  PG+  +   +L  +  
Sbjct: 593 IPLGPWIRRWASSVSDTFYSFLKHY-----YCIGGGMEADGELPPGWIHVHGFILGSLDA 647

Query: 658 -----REQAPPPLSKPTPS---------LDAQYTLIQCCRQDNIMDVM-------MKTIF 696
                +  APP L+   P          L A   L + C  +    V+       +K++ 
Sbjct: 648 VVRPRKPPAPPSLTPCIPKPRKIHKLKLLGALRELKKSCHAEFFAHVLAPAIEDILKSVS 707

Query: 697 LKTCVFDLPVVSTTLSLVECWLKEYGPLPDSFDINFFCEGIESIIVADHHQILIRALQML 756
           LKT V+D+   +    L E  L        S D  F+   +  ++ ++ H   +RAL  L
Sbjct: 708 LKTVVYDVEQCTALADLAEEMLTMLESPLRSLDAAFWLNVVGIMLRSESHYTTLRALAFL 767

Query: 757 YNTSECFQRNLRKVLFQDLLLNKYFYALFLHWDQPVRNAYHHLLLYKMVRINRSKLYESG 816
           +NT          +    +L        F HW   +R AY  ++ Y+++     K+  S 
Sbjct: 768 HNTFPHNDPGASSMYADFILEPDTLKKYFCHWHPLIRAAYMRVVCYRVLPKAPQKMNHSL 827

Query: 817 ATL 819
            T+
Sbjct: 828 VTV 830


>gi|46097684|gb|EAK82917.1| hypothetical protein UM06288.1 [Ustilago
            maydis 521]
 ref|XP_403903.1| hypothetical protein UM06288.1 [Ustilago maydis 521]
          Length = 1700

 Score = 38.9 bits (89), Expect = 0.91
 Identities = 36/136 (26%), Positives = 63/136 (45%), Gaps = 20/136 (14%)

Query: 687  IMDVMMKTIFLKTCVFDLPVVSTTLSLVECWLKEYGPLPDSFDINFFCEGI--ESIIV-- 742
            ++ + +K +  +T ++D+  V   L     WL   G +     I+F  EG+   S I+  
Sbjct: 1200 MLGLHIKALVKRTSLYDVQGVFCLLD----WLD--GVISHMDSIDFIGEGLIDVSFIITT 1253

Query: 743  -------ADHHQILIRALQMLY-NTSECFQRNLRKVLFQDLLLNK--YFYALFLHWDQPV 792
                   ADH   L+R +   Y N       +  ++ F + +L K   F+ LFL W   +
Sbjct: 1254 IGMLLENADHALALMRTIAFCYANFGVLTATSENRIYFCEQILLKPTVFHKLFLSWSFTI 1313

Query: 793  RNAYHHLLLYKMVRIN 808
            R  Y HLL++++ RI+
Sbjct: 1314 RAYYLHLLVFRLARIH 1329


  Database: /home/dicty1/resource/WorkingDBs//nr-clean
    Posted date:  Mar 10, 2005 12:10 PM
  Number of letters in database: 788,375,511
  Number of sequences in database:  2,329,665
  
Lambda     K      H
   0.320    0.135    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,138,497,890
Number of Sequences: 2329665
Number of extensions: 39507082
Number of successful extensions: 91586
Number of sequences better than  1.0: 3
Number of HSP's better than  1.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 91581
Number of HSP's gapped (non-prelim): 7
length of query: 1127
length of database: 788,375,511
effective HSP length: 138
effective length of query: 989
effective length of database: 466,881,741
effective search space: 461746041849
effective search space used: 461746041849
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 89 (38.9 bits)
BLASTP 2.2.1 [Jul-12-2001]