Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DDB0189253
(394 letters)
Database: /home/dicty1/resource/WorkingDBs//nr-clean
2,329,665 sequences; 788,375,511 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|23482526|gb|EAA18486.1| hypothetical protein [Plasmodium yoel... 44 0.008
gi|57088943|ref|XP_537167.1| PREDICTED: similar to Nucleoprotein... 42 0.023
gi|23509818|ref|NP_702485.1| hypothetical protein PF14_0596 [Pla... 41 0.051
gi|26553545|ref|NP_757479.1| hypothetical protein MYPE920 [Mycop... 41 0.051
gi|46253515|gb|AAS85752.1| reticulocyte binding protein 2 [Plasm... 41 0.051
gi|46253513|gb|AAS85751.1| reticulocyte binding protein 2 [Plasm... 41 0.051
gi|49480165|ref|YP_034831.1| sensor histidine kinase [Bacillus t... 40 0.087
gi|49649008|emb|CAG81338.1| unnamed protein product [Yarrowia li... 40 0.087
gi|50738301|ref|XP_419285.1| PREDICTED: hypothetical protein XP_... 40 0.15
gi|55957278|emb|CAI17859.1| translocated promoter region (to act... 39 0.25
gi|423123|pir||S33124 tpr protein - human 39 0.25
gi|57109562|ref|XP_535757.1| PREDICTED: similar to Golgi autoant... 39 0.25
gi|4507659|ref|NP_003283.1| translocated promoter region (to act... 39 0.25
gi|55588926|ref|XP_514063.1| PREDICTED: hypothetical protein XP_... 39 0.25
gi|49529189|emb|CAG62855.1| unnamed protein product [Candida gla... 39 0.25
gi|1850342|gb|AAB48030.1| Tpr [Homo sapiens] 39 0.25
gi|23485983|gb|EAA20681.1| TPR Domain, putative [Plasmodium yoel... 39 0.25
gi|47777831|ref|YP_017195.2| sensor histidine kinase [Bacillus a... 39 0.33
gi|21398527|ref|NP_654512.1| HATPase_c, Histidine kinase-, DNA g... 39 0.33
gi|48870768|ref|ZP_00323487.1| COG0457: FOG: TPR repeat [Pedioco... 38 0.56
gi|8570645|gb|AAF76525.1| reticulocyte-binding protein 2 [Plasmo... 38 0.56
gi|280512|pir||B42771 reticulocyte-binding protein 2 - Plasmodiu... 38 0.56
>gi|23482526|gb|EAA18486.1| hypothetical protein [Plasmodium yoelii
yoelii]
Length = 460
Score = 43.9 bits (102), Expect = 0.008
Identities = 41/185 (22%), Positives = 87/185 (46%), Gaps = 12/185 (6%)
Query: 5 DNEKKVKLQQILTDSLLLQKQVKVIFAGGNNNETTIKQITTLLGQLRDKSK---QANELC 61
+ KK+ QQ+L + + +VIF+ +N E+ +K+I + + K + +E+C
Sbjct: 249 EQNKKI-FQQLLKYIEDIITKNEVIFSNTDNEESCLKKIKNAIYNIIKNKKYEIKNDEIC 307
Query: 62 EQLSHDHGKSLVSILNCFINWNQIVLDATTSTTPTSIEKLKEYS---LPIESKLIEIRSI 118
+ L H L+ + F+ I +I LK+Y+ + I+ K+ ++
Sbjct: 308 KLLDKSHITRLIIHIIYFLAKEHIKTQNIKLNIIKNIS-LKDYTNDEINIDKKIKIFETV 366
Query: 119 AKS----FKDASLDARSMELLTNIYNKTNQIDKEVDILEKAVSAEKNPQRSVALFDAYLK 174
K F ++ ++ + N+ + +KE++ EK + EK ++ +++ + Y K
Sbjct: 367 EKEKDNIFNSEQINIQNRDTTIIPSNEIIKYEKEIEKYEKIKNLEKKNKKLLSINEYYKK 426
Query: 175 KLDHT 179
KL+HT
Sbjct: 427 KLEHT 431
>gi|57088943|ref|XP_537167.1| PREDICTED: similar to Nucleoprotein
TPR [Canis familiaris]
Length = 2162
Score = 42.4 bits (98), Expect = 0.023
Identities = 34/141 (24%), Positives = 67/141 (47%), Gaps = 8/141 (5%)
Query: 33 GNNNETTIKQITTLLGQLRDKSKQANELCEQL-----SHDHGKSLVSILNCFINWNQIVL 87
G + + + LL QLR +Q N+L E+L + + +++V+ L +N + V
Sbjct: 786 GKGQPSNKEDVDDLLSQLRQAEEQVNDLKERLKTSTSNVEQYRAMVTSLEESLNKEKQVT 845
Query: 88 DATTSTTPTSIEKLKEYSLPIESKLIEIRSIAKSFKDASLDA-RSME-LLTNIYNKTNQI 145
+ +++ E+ +E KL+E+ + +D A SME L+ + N +
Sbjct: 846 EEVRKNIEVRLKESAEFQTQLEKKLMEVEKEKQELQDDKRKAIESMEHQLSELKKTLNSV 905
Query: 146 DKEV-DILEKAVSAEKNPQRS 165
EV + L++A +A N Q++
Sbjct: 906 QNEVQEALQRASTALSNEQQA 926
>gi|23509818|ref|NP_702485.1| hypothetical protein PF14_0596
[Plasmodium falciparum 3D7]
gb|AAN37209.1| hypothetical protein [Plasmodium falciparum 3D7]
Length = 523
Score = 41.2 bits (95), Expect = 0.051
Identities = 28/109 (25%), Positives = 55/109 (49%), Gaps = 5/109 (4%)
Query: 260 DQFILQRKNQLFKLAIYIGSLANPLISAKDKEVVSISMEAFDEALHIADITQNKEYFCAA 319
D +L + N L + I S PL K K+ +S +F +A + ++ ++++ F
Sbjct: 132 DYMLLNKINTLDSIDINELSSDAPLAVVKSKKPPELSNTSFFDATKLLEMIKDRQTFLET 191
Query: 320 TAHKSSVVYRTLPEDERAKLFKSLVDVEQSMKP--VNSEIRDLIQSIEN 366
K ++Y++L D+ K+FK + +QS+ V + + DL + I+N
Sbjct: 192 ---KKEILYKSLSRDDLMKMFKDIKVSDQSIHKDLVQNTLLDLYEKIKN 237
>gi|26553545|ref|NP_757479.1| hypothetical protein MYPE920
[Mycoplasma penetrans HF-2]
dbj|BAC43883.1| hypothetical protein [Mycoplasma penetrans HF-2]
Length = 240
Score = 41.2 bits (95), Expect = 0.051
Identities = 48/148 (32%), Positives = 71/148 (47%), Gaps = 25/148 (16%)
Query: 26 VKVIFAGGNNNETTIKQITTLLGQLRDKSKQANE-----LCEQ-LSHDHGK--SLVSILN 77
V IF+ +NNET +I T+ G L +K NE +C+ +S+D GK L+ L
Sbjct: 98 VDYIFSEESNNETQASKIKTIKGVLSNKEYDLNESDINSICDAIISNDEGKKEQLLEELT 157
Query: 78 CFINWNQIVLDATTS-------TTPTSIEKLKEYSLPIESKLIEIRSIAKSFKDAS-LDA 129
++ V D+TT T + KLK+ I + EI+S + S LD
Sbjct: 158 -----HKEVSDSTTQDSLSDLILTQDFLSKLKKEGKEISTN-FEIKSKENVDNECSWLDD 211
Query: 130 RSMELLTNIYNKTN-QIDKE--VDILEK 154
++EL +N NK N IDKE + +L K
Sbjct: 212 GNLELQSNQINKNNGSIDKEDFISLLNK 239
>gi|46253515|gb|AAS85752.1| reticulocyte binding protein 2 [Plasmodium
vivax]
Length = 2824
Score = 41.2 bits (95), Expect = 0.051
Identities = 48/236 (20%), Positives = 100/236 (42%), Gaps = 50/236 (21%)
Query: 6 NEKKVKLQQILTDSLLLQKQVKVIFAGGNNN------ETTIKQITTLLGQLRDKSKQANE 59
N+ +L + +TDS + ++K + N N E++ K+I L +L++K NE
Sbjct: 2235 NKSSEELTKAVTDSKTIISKLKGVIIEVNENTEMNTIESSAKEIEALYNELKNKKTSLNE 2294
Query: 60 LCEQLSHDHGKSLVSILNCFINWNQI--------------------------------VL 87
+ + + + + S + +I+ ++I ++
Sbjct: 2295 IYQTSNEVKLQEMKSNADKYIDVSKIFNTVLDTQKSNIVTNQHSINNVKDKLKGKLQELI 2354
Query: 88 DATTSTTPTSIEKLKEYSLPIESKLIEIRSIAKSFKDASLD-ARSMELLTNIYNKTNQID 146
DA +S T SI+K E I++ + E+ + ++ K + A+ E + ++ N+ +
Sbjct: 2355 DADSSFTLESIKKFNEIYSHIKTNIGELEQLQQTNKSEHDNVAKHKEKIVHLINRVESLK 2414
Query: 147 KEV-----DILEKAVSAE------KNPQRSVALFDAYLKKLDHTYQDRDRIYQLNN 191
+V D K ++A KN S+ + D LKKL ++ D++ + NN
Sbjct: 2415 GDVKNHGDDQYMKKLNASLLNDNIKNTTNSINISDEELKKLLKKVEENDQLCKNNN 2470
Score = 40.4 bits (93), Expect = 0.087
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 33/203 (16%)
Query: 11 KLQQILTDSLLLQKQVKVIFAGGNNNETTIKQI---TTLLG---QLRDKSKQANELCEQL 64
K +Q LTD +KQ +N+ET I I + +LG + + K K+A+++ +++
Sbjct: 1510 KSEQYLTDIKGTEKQANTNVELFHNHETNISNIFKQSEILGVETKSKKKIKEADDIMKEI 1569
Query: 65 SHDHGKSLVSILNCFINWNQI--------VLDATTSTTPTSIEKLKEYSLP-IESKLIEI 115
+ + + + N N++ D + TS + L + +L ++ L EI
Sbjct: 1570 EGHNSEIQTQVKSFQENLNKLNEPHNYDNAEDELNNDKSTSAKVLIQTNLESVKHNLSEI 1629
Query: 116 RSIAKSFKDASLDARSMELLTNIYNKTNQIDKEVDILEKAVSAEKNPQRSVALFDAYLKK 175
+I KD NIYNK N I +++ + K SAEK + Y+
Sbjct: 1630 TNI----KDGG---------ENIYNKANDIMQKIKAISKN-SAEKTLDKVKDDHSNYVNY 1675
Query: 176 LDHTYQDRDRIY----QLNNKDT 194
LD +RD I +LN KD+
Sbjct: 1676 LDQIITERDLIVTEKNRLNGKDS 1698
>gi|46253513|gb|AAS85751.1| reticulocyte binding protein 2 [Plasmodium
vivax]
Length = 2868
Score = 41.2 bits (95), Expect = 0.051
Identities = 48/236 (20%), Positives = 100/236 (42%), Gaps = 50/236 (21%)
Query: 6 NEKKVKLQQILTDSLLLQKQVKVIFAGGNNN------ETTIKQITTLLGQLRDKSKQANE 59
N+ +L + +TDS + ++K + N N E++ K+I L +L++K NE
Sbjct: 2231 NKSSEELTKAVTDSKTIISKLKGVIIEVNENTEMNTIESSAKEIEALYNELKNKKTSLNE 2290
Query: 60 LCEQLSHDHGKSLVSILNCFINWNQI--------------------------------VL 87
+ + + + + S + +I+ ++I ++
Sbjct: 2291 IYQTSNEVKLQEMKSNADKYIDVSKIFNTVLDTQKSNIVTNQHSINNVKDKLKGKLQELI 2350
Query: 88 DATTSTTPTSIEKLKEYSLPIESKLIEIRSIAKSFKDASLD-ARSMELLTNIYNKTNQID 146
DA +S T SI+K E I++ + E+ + ++ K + A+ E + ++ N+ +
Sbjct: 2351 DADSSFTLESIKKFNEIYSHIKTNIGELEQLQQTNKSEHDNVAKHKEKIVHLINRVESLK 2410
Query: 147 KEV-----DILEKAVSAE------KNPQRSVALFDAYLKKLDHTYQDRDRIYQLNN 191
+V D K ++A KN S+ + D LKKL ++ D++ + NN
Sbjct: 2411 GDVKNHGDDQYMKKLNASLLNDNIKNTTNSINISDEELKKLLKKVEENDQLCKNNN 2466
>gi|49480165|ref|YP_034831.1| sensor histidine kinase [Bacillus
thuringiensis serovar konkukian str. 97-27]
gb|AAT62367.1| sensor histidine kinase [Bacillus thuringiensis serovar konkukian
str. 97-27]
Length = 416
Score = 40.4 bits (93), Expect = 0.087
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
Query: 69 GKSLVSILNCFINWNQIVLDATTST-TPTSIEKLK------EYSLPIESKLIEIRSIAKS 121
G++LV I N + Q V DA+ TP ++ + K S IE K ++I +I+K
Sbjct: 179 GRALVPIQNSWEKQQQFVSDASHELRTPLAVIQSKTDILFQSPSATIEEKAMDISTISKE 238
Query: 122 FKDASLDARSMELLTNIYNKTNQIDKEVDILEKAVSAEKNPQRSVALFD--AYLKKLDHT 179
+ S ++ LL + ++DK++ L+K + P + +A + + K++H
Sbjct: 239 CRRLSKLVANLLLLARSDSNQIEMDKKIFELDKLLEEIVEPYKEIASYQEKEMILKVEHD 298
Query: 180 YQ---DRDRIYQL 189
DR+RI+Q+
Sbjct: 299 ISFMGDRERIHQM 311
>gi|49649008|emb|CAG81338.1| unnamed protein product [Yarrowia
lipolytica CLIB99]
ref|XP_503140.1| hypothetical protein [Yarrowia lipolytica]
Length = 377
Score = 40.4 bits (93), Expect = 0.087
Identities = 45/214 (21%), Positives = 90/214 (42%), Gaps = 19/214 (8%)
Query: 5 DNEKKVKLQQILTDSLLLQKQVKVIFAGGNNNETTIKQITTLLGQLRDKSKQANE-LCEQ 63
D +K VK +++ +D + + + A ET ++Q G L KS+ + + E+
Sbjct: 117 DKKKPVKKKKVKSDDVAPETSDMFVDAALERVETGLEQYPEDAGLLFVKSRALKQDIDEK 176
Query: 64 LS-------HDHGKSLVSILNCFINWNQIVLDATTSTTPTSIEKLKEYSLPIESKLIEIR 116
+S + K ++S LN + ++ ++ TP ++ ++E LIE+
Sbjct: 177 MSAVSKEERKETAKKMISQLNKILEVFKLAQKHASTVTPAQLDVVEE--------LIELS 228
Query: 117 SIAKSF-KDASLDARSMELLTNIYNKTNQIDKEVDILEKAVSAEKNPQRSVALFDAYLKK 175
+S K + + ++ YN+ +K+ + ++KA + VA D+ L
Sbjct: 229 GALESVVKQSDISETTLVACEKFYNEILASEKDENTVKKAHRGVGTCKMIVA--DSLLDL 286
Query: 176 LDHTYQDRDRIYQLNNKDTXXXXXXXXXXDNDED 209
LD +D D +L K+ + DED
Sbjct: 287 LDDDDEDNDDTVELAKKNLKAAIEHFQKSETDED 320
>gi|50738301|ref|XP_419285.1| PREDICTED: hypothetical protein
XP_419285 [Gallus gallus]
Length = 1546
Score = 39.7 bits (91), Expect = 0.15
Identities = 43/186 (23%), Positives = 91/186 (48%), Gaps = 12/186 (6%)
Query: 9 KVKLQQILTDSLLLQKQVKVIFAGGNNNETTIKQITTLLGQLRDKSKQANELCEQLSHDH 68
+ ++++I ++ +L + +K + N E IKQ+ + ++K+++A EL +L H
Sbjct: 579 EAQMKEIEKENKILHESIKETSSKLNKLEFEIKQVRKEMEHYKEKAERAEELENELHHLE 638
Query: 69 GKSLV---SILNCFINWNQI-VLDATTSTTPTSIEKLKEYSLPIESKLIEIRSIAKSFKD 124
++ + I N I +I L+ S KLK+ +++ ++ S+ K ++
Sbjct: 639 KENELLQKKIANLSITCEKIEALEKENSDLDIENRKLKKTLDSLKNLSFQLESLEK--EN 696
Query: 125 ASLDARSMELLTNIYNK--TNQIDKEVDILEKAVSAEKNP-QRSVALFDAYLKK---LDH 178
+ LD ++EL I + T+ ++ + K + +EK ++S+ L A KK L+
Sbjct: 697 SQLDEENLELRRRIESSKCTSIKMAQLQLENKELESEKEQLKKSLELMKASFKKSERLEV 756
Query: 179 TYQDRD 184
+YQ D
Sbjct: 757 SYQGLD 762
>gi|55957278|emb|CAI17859.1| translocated promoter region (to
activated MET oncogene) [Homo sapiens]
emb|CAI13119.1| translocated promoter region (to activated MET oncogene) [Homo
sapiens]
Length = 2363
Score = 38.9 bits (89), Expect = 0.25
Identities = 28/143 (19%), Positives = 65/143 (44%), Gaps = 11/143 (7%)
Query: 33 GNNNETTIKQITTLLGQLRDKSKQANELCEQL-----SHDHGKSLVSILNCFINWNQIVL 87
G + + + L+ QLR +Q N+L E+L + + +++V+ L +N + V
Sbjct: 924 GKGQPSNKEDVDDLVSQLRQTEEQVNDLKERLKTSTSNVEQYQAMVTSLEESLNKEKQVT 983
Query: 88 DATTSTTPTSIEKLKEYSLPIESKLIEIRSIAKSFKD------ASLDARSMELLTNIYNK 141
+ +++ E+ +E KL+E+ + +D S++ + EL + +
Sbjct: 984 EEVRKNIEVRLKESAEFQTQLEKKLMEVEKEKQELQDDKRRAIESMEQQLSELKKTLSSV 1043
Query: 142 TNQIDKEVDILEKAVSAEKNPQR 164
N++ + + A+S E+ +R
Sbjct: 1044 QNEVQEALQRASTALSNEQQARR 1066
>gi|423123|pir||S33124 tpr protein - human
Length = 2094
Score = 38.9 bits (89), Expect = 0.25
Identities = 28/143 (19%), Positives = 65/143 (44%), Gaps = 11/143 (7%)
Query: 33 GNNNETTIKQITTLLGQLRDKSKQANELCEQL-----SHDHGKSLVSILNCFINWNQIVL 87
G + + + L+ QLR +Q N+L E+L + + +++V+ L +N + V
Sbjct: 924 GKGQPSNKEDVDDLVSQLRQTEEQVNDLKERLKTSTSNVEQYQAMVTSLEESLNKEKQVT 983
Query: 88 DATTSTTPTSIEKLKEYSLPIESKLIEIRSIAKSFKD------ASLDARSMELLTNIYNK 141
+ +++ E+ +E KL+E+ + +D S++ + EL + +
Sbjct: 984 EEVRKNIEVRLKESAEFQTQLEKKLMEVEKEKQELQDDKRRAIESMEQQLSELKKTLSSV 1043
Query: 142 TNQIDKEVDILEKAVSAEKNPQR 164
N++ + + A+S E+ +R
Sbjct: 1044 QNEVQEALQRASTALSNEQQARR 1066
>gi|57109562|ref|XP_535757.1| PREDICTED: similar to Golgi autoantigen,
golgin subfamily B member 1 (Giantin) (Macrogolgin)
(Golgi complex-associated protein, 372-kDa) (GCP372)
[Canis familiaris]
Length = 2141
Score = 38.9 bits (89), Expect = 0.25
Identities = 45/210 (21%), Positives = 89/210 (41%), Gaps = 32/210 (15%)
Query: 7 EKKVKLQQILTDSL-----LLQKQVKVIFAGGNNNETTIKQITTLLGQLRDKSKQANELC 61
+ +V+LQQ + D+L L Q++ ++++ + ++ + L LRD+S N
Sbjct: 1230 QTEVQLQQKVCDTLQGENKALLSQLEETRQLYHSSQNELAKLESELKNLRDQSMDLNNSL 1289
Query: 62 EQLSHDHG-------KSLVSILNCFINWNQIVLDATTSTTPTSIEKLKEYSLPIESKLIE 114
E+ + + I NC N+ ++ D S TS KL E E K+I
Sbjct: 1290 EKCKENKENLEGIIKRQEADIQNCKFNYEKLETDLQASRELTS--KLHEELNMKEQKIIS 1347
Query: 115 IRS---------IAKSFKDASLDARSMELLTNIYNKTN---------QIDKEVDILEKAV 156
+ S +A+ + + + + +E L + + N +DK ++E
Sbjct: 1348 LLSAKEQAIQVAVAELHQQHNKEIKELENLLSQEEEENVVLEEENKKAVDKTNQLMETLK 1407
Query: 157 SAEKNPQRSVALFDAYLKKLDHTYQDRDRI 186
+ +K + A ++++K + DRDRI
Sbjct: 1408 AIKKENLQQKAQLNSFVKSMSSLQDDRDRI 1437
>gi|4507659|ref|NP_003283.1| translocated promoter region (to
activated MET oncogene) [Homo sapiens]
emb|CAA47021.1| Tpr [Homo sapiens]
sp|P12270|TPR_HUMAN Nucleoprotein TPR
Length = 2349
Score = 38.9 bits (89), Expect = 0.25
Identities = 28/143 (19%), Positives = 65/143 (44%), Gaps = 11/143 (7%)
Query: 33 GNNNETTIKQITTLLGQLRDKSKQANELCEQL-----SHDHGKSLVSILNCFINWNQIVL 87
G + + + L+ QLR +Q N+L E+L + + +++V+ L +N + V
Sbjct: 924 GKGQPSNKEDVDDLVSQLRQTEEQVNDLKERLKTSTSNVEQYQAMVTSLEESLNKEKQVT 983
Query: 88 DATTSTTPTSIEKLKEYSLPIESKLIEIRSIAKSFKD------ASLDARSMELLTNIYNK 141
+ +++ E+ +E KL+E+ + +D S++ + EL + +
Sbjct: 984 EEVRKNIEVRLKESAEFQTQLEKKLMEVEKEKQELQDDKRRAIESMEQQLSELKKTLSSV 1043
Query: 142 TNQIDKEVDILEKAVSAEKNPQR 164
N++ + + A+S E+ +R
Sbjct: 1044 QNEVQEALQRASTALSNEQQARR 1066
>gi|55588926|ref|XP_514063.1| PREDICTED: hypothetical protein
XP_514063 [Pan troglodytes]
Length = 2485
Score = 38.9 bits (89), Expect = 0.25
Identities = 28/143 (19%), Positives = 65/143 (44%), Gaps = 11/143 (7%)
Query: 33 GNNNETTIKQITTLLGQLRDKSKQANELCEQL-----SHDHGKSLVSILNCFINWNQIVL 87
G + + + L+ QLR +Q N+L E+L + + +++V+ L +N + V
Sbjct: 1034 GKGQPSNKEDVDDLVSQLRQTEEQVNDLKERLKTSTSNVEQYQAMVTSLEESLNKEKQVT 1093
Query: 88 DATTSTTPTSIEKLKEYSLPIESKLIEIRSIAKSFKD------ASLDARSMELLTNIYNK 141
+ +++ E+ +E KL+E+ + +D S++ + EL + +
Sbjct: 1094 EEVRKNIEVRLKESAEFQTQLEKKLMEVEKEKQELQDDKRRAIESMEQQLSELKKTLSSV 1153
Query: 142 TNQIDKEVDILEKAVSAEKNPQR 164
N++ + + A+S E+ +R
Sbjct: 1154 QNEVQEALQRASTALSNEQQARR 1176
>gi|49529189|emb|CAG62855.1| unnamed protein product [Candida
glabrata CBS138]
ref|XP_449875.1| unnamed protein product [Candida glabrata]
Length = 814
Score = 38.9 bits (89), Expect = 0.25
Identities = 49/224 (21%), Positives = 86/224 (37%), Gaps = 29/224 (12%)
Query: 7 EKKVKLQQILTDSLLLQKQVKVIFAGGNNNETTIKQITTLLGQLRDKSKQANELCEQLSH 66
EK KL+ IL D L LQK V A NE + + +L D++ + N +
Sbjct: 445 EKSEKLEAILLDKLSLQKSNLVKLADSTANENNMSKDVIETSELGDQNNKTNMDFYKSYQ 504
Query: 67 DHGKSLVSILNCFINWNQIVLDATTSTTPTSIEKLKEYSLPIESKLIEIRSIAKSFKDAS 126
H +L S + L S +++ LKE E IEI+ + F
Sbjct: 505 YHIDNLTSHIE--------RLKLNISERDEAVDYLKEEE---EQLRIEIQKQKERFNRQM 553
Query: 127 LDARSM---------ELLTNIYNKTNQIDKEVDILEKAVSAEKN--------PQRSVALF 169
D + + EL+ + ++ +++ L K VS KN ++ L
Sbjct: 554 ADKKELYMQKESNWKELIGSYEDQLEEVNLSRKQLSKTVSDLKNEIQEIYQQSSENMKLL 613
Query: 170 DAYLKKLDHTYQD-RDRIYQLNNKDTXXXXXXXXXXDNDEDIKV 212
+ + L Q D ++QL+ +++ N E++K+
Sbjct: 614 EQDVASLQEKCQSYNDEVFQLSKQNSALSAKLEAFTKNSENLKL 657
>gi|1850342|gb|AAB48030.1| Tpr [Homo sapiens]
Length = 2363
Score = 38.9 bits (89), Expect = 0.25
Identities = 28/143 (19%), Positives = 65/143 (44%), Gaps = 11/143 (7%)
Query: 33 GNNNETTIKQITTLLGQLRDKSKQANELCEQL-----SHDHGKSLVSILNCFINWNQIVL 87
G + + + L+ QLR +Q N+L E+L + + +++V+ L +N + V
Sbjct: 924 GKGQPSNKEDVDDLVSQLRQTEEQVNDLKERLKTSTSNVEQYQAMVTSLEESLNKEKQVT 983
Query: 88 DATTSTTPTSIEKLKEYSLPIESKLIEIRSIAKSFKD------ASLDARSMELLTNIYNK 141
+ +++ E+ +E KL+E+ + +D S++ + EL + +
Sbjct: 984 EEVRKNIEVRLKESAEFQTQLEKKLMEVEKEKQELQDDKRRAIESMEQQLSELKKTLSSV 1043
Query: 142 TNQIDKEVDILEKAVSAEKNPQR 164
N++ + + A+S E+ +R
Sbjct: 1044 QNEVQEALQRASTALSNEQQARR 1066
>gi|23485983|gb|EAA20681.1| TPR Domain, putative [Plasmodium yoelii
yoelii]
Length = 1287
Score = 38.9 bits (89), Expect = 0.25
Identities = 27/62 (43%), Positives = 35/62 (55%), Gaps = 2/62 (3%)
Query: 135 LTNIYNKTNQIDKEVDILEKAVSAEKNPQRSVALFDAYLKKL--DHTYQDRDRIYQLNNK 192
L NIY KT QI+ + IL+ A KN S LFD YLKK + + Q+ DRI + + K
Sbjct: 1084 LANIYFKTGQINNCIGILKSAWRHNKNFVFSSMLFDIYLKKKKGNLSLQNEDRILEEHCK 1143
Query: 193 DT 194
T
Sbjct: 1144 IT 1145
>gi|47777831|ref|YP_017195.2| sensor histidine kinase [Bacillus
anthracis str. 'Ames Ancestor']
ref|YP_026819.1| sensor histidine kinase [Bacillus anthracis str. Sterne]
ref|NP_843106.1| sensor histidine kinase [Bacillus anthracis str. Ames]
gb|AAP24592.1| sensor histidine kinase [Bacillus anthracis str. Ames]
gb|AAT29670.2| sensor histidine kinase [Bacillus anthracis str. 'Ames Ancestor']
gb|AAT52870.1| sensor histidine kinase [Bacillus anthracis str. Sterne]
Length = 416
Score = 38.5 bits (88), Expect = 0.33
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 12/133 (9%)
Query: 69 GKSLVSILNCFINWNQIVLDATTST-TPTSIEKLK------EYSLPIESKLIEIRSIAKS 121
G++LV I N + Q V DA+ TP ++ + K S IE K ++I +I+K
Sbjct: 179 GRALVPIQNSWEKQQQFVSDASHELRTPLAVIQSKTDILFQSPSATIEEKAMDISTISKE 238
Query: 122 FKDASLDARSMELLTNIYNKTNQIDKEVDILEKAVSAEKNPQRSVALFDAYLKKLDHTYQ 181
+ S ++ LL + ++DK++ L+K + P + +A + L Y
Sbjct: 239 CRRLSKLVANLLLLARSDSNQIEMDKKIFELDKLLEEIVEPYKEIASYQEKEMILKVEYD 298
Query: 182 -----DRDRIYQL 189
DR+RI+Q+
Sbjct: 299 ISFMGDRERIHQM 311
>gi|21398527|ref|NP_654512.1| HATPase_c, Histidine kinase-, DNA
gyrase B-, phytochrome-like ATPase [Bacillus anthracis
str. A2012]
Length = 411
Score = 38.5 bits (88), Expect = 0.33
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 12/133 (9%)
Query: 69 GKSLVSILNCFINWNQIVLDATTST-TPTSIEKLK------EYSLPIESKLIEIRSIAKS 121
G++LV I N + Q V DA+ TP ++ + K S IE K ++I +I+K
Sbjct: 174 GRALVPIQNSWEKQQQFVSDASHELRTPLAVIQSKTDILFQSPSATIEEKAMDISTISKE 233
Query: 122 FKDASLDARSMELLTNIYNKTNQIDKEVDILEKAVSAEKNPQRSVALFDAYLKKLDHTYQ 181
+ S ++ LL + ++DK++ L+K + P + +A + L Y
Sbjct: 234 CRRLSKLVANLLLLARSDSNQIEMDKKIFELDKLLEEIVEPYKEIASYQEKEMILKVEYD 293
Query: 182 -----DRDRIYQL 189
DR+RI+Q+
Sbjct: 294 ISFMGDRERIHQM 306
>gi|48870768|ref|ZP_00323487.1| COG0457: FOG: TPR repeat
[Pediococcus pentosaceus ATCC 25745]
Length = 1100
Score = 37.7 bits (86), Expect = 0.56
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 124 DASLDARSMELLTNIYNKTNQIDKEVDILEKAVSAEKNPQRSVALFDAYLKKLDHTYQDR 183
D ++ R++ ++ YNKTNQ K ++ LEKA + R V D+ +K++H+ DR
Sbjct: 787 DYAMSYRNLSIV--YYNKTNQPKKALEYLEKAFKLDPKNARLVFELDSLYQKMNHSLTDR 844
>gi|8570645|gb|AAF76525.1| reticulocyte-binding protein 2 [Plasmodium
vivax]
sp|Q00799|RBP2_PLAVB Reticulocyte binding protein 2 precursor (PvRBP-2)
Length = 2867
Score = 37.7 bits (86), Expect = 0.56
Identities = 38/171 (22%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 6 NEKKVKLQQILTDSLLLQKQVKVIFAGGNNN------ETTIKQITTLLGQLRDKSKQANE 59
N+ +L + +TDS + ++K + N N E++ K+I L +L++K NE
Sbjct: 2231 NKSSEELTKAVTDSKTIISKLKGVIIEVNENTEMNTIESSAKEIEALYNELKNKKTSLNE 2290
Query: 60 LCEQLSHDHGKSLVSILNCFINWNQI---VLDATTSTTPTSIEKLKEYSLPIESKLIEIR 116
+ + + + + S + +I+ ++I VLD S T+ + ++ KL E+
Sbjct: 2291 IYQTSNEVKLQEMKSNADKYIDVSKIFNTVLDTQKSNIVTNQHSINNVKDKLKGKLQELI 2350
Query: 117 SIAKSFKDASLDARSMELLTNIYNKTNQIDKEVDILEKAVSAEKNPQRSVA 167
D+S S++ IY + I + LE+ K+ +VA
Sbjct: 2351 D-----ADSSFTLESIKKFNEIY---SHIKTNIGELEQLQQTNKSEHDNVA 2393
>gi|280512|pir||B42771 reticulocyte-binding protein 2 - Plasmodium
vivax (fragment)
Length = 1252
Score = 37.7 bits (86), Expect = 0.56
Identities = 38/171 (22%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 6 NEKKVKLQQILTDSLLLQKQVKVIFAGGNNN------ETTIKQITTLLGQLRDKSKQANE 59
N+ +L + +TDS + ++K + N N E++ K+I L +L++K NE
Sbjct: 1043 NKSSEELTKAVTDSKTIISKLKGVIIEVNENTEMNTIESSAKEIEALYNELKNKKTSLNE 1102
Query: 60 LCEQLSHDHGKSLVSILNCFINWNQI---VLDATTSTTPTSIEKLKEYSLPIESKLIEIR 116
+ + + + + S + +I+ ++I VLD S T+ + ++ KL E+
Sbjct: 1103 IYQTSNEVKLQEMKSNADKYIDVSKIFNTVLDTQKSNIVTNQHSINNVKDKLKGKLQELI 1162
Query: 117 SIAKSFKDASLDARSMELLTNIYNKTNQIDKEVDILEKAVSAEKNPQRSVA 167
D+S S++ IY + I + LE+ K+ +VA
Sbjct: 1163 D-----ADSSFTLESIKKFNEIY---SHIKTNIGELEQLQQTNKSEHDNVA 1205
Database: /home/dicty1/resource/WorkingDBs//nr-clean
Posted date: Mar 10, 2005 12:10 PM
Number of letters in database: 788,375,511
Number of sequences in database: 2,329,665
Lambda K H
0.314 0.131 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 493,582,906
Number of Sequences: 2329665
Number of extensions: 17896902
Number of successful extensions: 47050
Number of sequences better than 1.0: 22
Number of HSP's better than 1.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 47030
Number of HSP's gapped (non-prelim): 44
length of query: 394
length of database: 788,375,511
effective HSP length: 129
effective length of query: 265
effective length of database: 487,848,726
effective search space: 129279912390
effective search space used: 129279912390
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 84 (37.0 bits)
BLASTP 2.2.1 [Jul-12-2001]