Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DDB0187995
(173 letters)
Database: /home/dicty1/resource/WorkingDBs//nr-clean
2,329,665 sequences; 788,375,511 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|8393956|ref|NP_036529.1| serine (or cysteine) proteinase inhi... 43 0.004
gi|5911369|gb|AAD55765.1| headpin [Homo sapiens] >gi|7522623|pir... 43 0.004
gi|9801227|emb|CAC03569.1| hurpin [Homo sapiens] 43 0.004
gi|6018510|emb|CAA04937.1| hurpin [Homo sapiens] 39 0.072
gi|46436230|gb|EAK95596.1| hypothetical protein CaO19.8956 [Cand... 37 0.16
gi|23479124|gb|EAA16038.1| repeat organellar protein-related [Pl... 37 0.16
gi|16804962|ref|NP_472991.1| 41 kDa antigen [Plasmodium falcipar... 37 0.21
gi|50057262|emb|CAH03246.1| hypothetical protein with coiled-coi... 36 0.47
gi|23510060|ref|NP_702726.1| hypothetical protein [Plasmodium fa... 35 0.80
gi|23507861|ref|NP_700531.1| regulator of nonsense transcripts, ... 35 0.80
gi|23480300|gb|EAA16896.1| hypothetical protein [Plasmodium yoel... 35 0.80
>gi|8393956|ref|NP_036529.1| serine (or cysteine) proteinase
inhibitor, clade B (ovalbumin), member 13 [Homo sapiens]
sp|Q9UIV8|SPB13_HUMAN Hurpin (HaCaT UV-repressible serpin) (Protease inhibitor 13)
(Headpin) (Serpin B13)
emb|CAA04936.2| hurpin [Homo sapiens]
emb|CAA04935.2| hurpin [Homo sapiens]
gb|AAF72879.1| headpin [Homo sapiens]
Length = 391
Score = 42.7 bits (99), Expect = 0.004
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 76 EKEKSQLENELNEYIRNNQMIDLQITQYLSSTSKNNSDYDLN--NKYIFERIEYYKNKQI 133
E + S+++ E E I N + + Q ++L+ SK +DY+LN N+ E+ + K +
Sbjct: 62 ETKSSRIKAEEKEVIENTEAVHQQFQKFLTEISKLTNDYELNITNRLFGEKTYLFLQKYL 121
Query: 134 DLQNKL--SNLKTVDXXXXXXXXXXXXXXTIEKKLNDKV 170
D K ++L+ VD +E K N+K+
Sbjct: 122 DYVEKYYHASLEPVDFVNAADESRKKINSWVESKTNEKI 160
>gi|5911369|gb|AAD55765.1| headpin [Homo sapiens]
pir||JC7118 headpin serine proteinase inhibitor - human
Length = 391
Score = 42.7 bits (99), Expect = 0.004
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 76 EKEKSQLENELNEYIRNNQMIDLQITQYLSSTSKNNSDYDLN--NKYIFERIEYYKNKQI 133
E + S+++ E E I N + + Q ++L+ SK +DY+LN N+ E+ + K +
Sbjct: 62 ETKSSRIKAEEKEVIENTEAVHQQFQKFLTEISKLTNDYELNITNRLFGEKTYLFLQKYL 121
Query: 134 DLQNKL--SNLKTVDXXXXXXXXXXXXXXTIEKKLNDKV 170
D K ++L+ VD +E K N+K+
Sbjct: 122 DYVEKYYHASLEPVDFVNAADESRKKINSWVESKTNEKI 160
>gi|9801227|emb|CAC03569.1| hurpin [Homo sapiens]
Length = 339
Score = 42.7 bits (99), Expect = 0.004
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 76 EKEKSQLENELNEYIRNNQMIDLQITQYLSSTSKNNSDYDLN--NKYIFERIEYYKNKQI 133
E + S+++ E E I N + + Q ++L+ SK +DY+LN N+ E+ + K +
Sbjct: 62 ETKSSRIKAEEKEVIENTEAVHQQFQKFLTEISKLTNDYELNITNRLFGEKTYLFLQKYL 121
Query: 134 DLQNKL--SNLKTVDXXXXXXXXXXXXXXTIEKKLNDKV 170
D K ++L+ VD +E K N+K+
Sbjct: 122 DYVEKYYHASLEPVDFVNAADESRKKINSWVESKTNEKI 160
>gi|6018510|emb|CAA04937.1| hurpin [Homo sapiens]
Length = 390
Score = 38.5 bits (88), Expect = 0.072
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 76 EKEKSQLENELNEYIRNNQMIDLQITQYLSSTSKNNSDYDLN--NKYIFERIEYYKNKQI 133
E + S+++ E E I N + + Q ++L+ SK +DY+LN N+ E+ + K +
Sbjct: 62 ETKSSRIKAEEKE-IENTEAVHQQFQKFLTEISKLTNDYELNITNRLFGEKTYLFLQKYL 120
Query: 134 DLQNKL--SNLKTVDXXXXXXXXXXXXXXTIEKKLNDKV 170
D K ++L+ VD +E K N+K+
Sbjct: 121 DYVEKYYHASLEPVDFVNAADESRKKINSWVESKTNEKI 159
>gi|46436230|gb|EAK95596.1| hypothetical protein CaO19.8956 [Candida
albicans SC5314]
gb|EAK95495.1| hypothetical protein CaO19.1376 [Candida albicans SC5314]
Length = 295
Score = 37.4 bits (85), Expect = 0.16
Identities = 18/70 (25%), Positives = 37/70 (52%)
Query: 75 FEKEKSQLENELNEYIRNNQMIDLQITQYLSSTSKNNSDYDLNNKYIFERIEYYKNKQID 134
F E + ++L+ Y +ID + +L N+ D D ++K I + ++ Q+D
Sbjct: 39 FMNEIQDINSQLDNYSNIINLIDNKQKNFLHGLDLNDEDTDYDSKQIENLVNEAQSLQLD 98
Query: 135 LQNKLSNLKT 144
L+N++ N++T
Sbjct: 99 LKNRIKNVQT 108
>gi|23479124|gb|EAA16038.1| repeat organellar protein-related
[Plasmodium yoelii yoelii]
Length = 1441
Score = 37.4 bits (85), Expect = 0.16
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 76 EKEKSQLENELNEYIRNNQMIDLQITQYLSSTSKNNSDYDLNNKYIFERIEYYKNKQIDL 135
+KE+S N+ NN+++D+ Y++ + NNK +E KNK IDL
Sbjct: 1208 KKERSVFSVSDNKN-ENNELVDIVRNTYINKIEVYKKEIKDNNK----NMEDLKNKIIDL 1262
Query: 136 QNKLSNLKTV 145
N+L+NLK V
Sbjct: 1263 SNELANLKNV 1272
>gi|16804962|ref|NP_472991.1| 41 kDa antigen [Plasmodium falciparum
3D7]
gb|AAC71852.1| 41 kDa antigen [Plasmodium falciparum 3D7]
pir||C71618 hypothetical protein PFB0315w - malaria parasite (Plasmodium
falciparum)
Length = 1712
Score = 37.0 bits (84), Expect = 0.21
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 17/94 (18%)
Query: 79 KSQLENELNEYIRNNQMIDLQI---TQYLSSTSKNNSDYDLNNKYIFERIEYYKNKQIDL 135
K++ NE N + +N Q I L + S+T +N+ YD NN + Y +K IDL
Sbjct: 252 KTEFLNEKNSHTQNEQSIPLLDGLQNNHNSATKFHNNIYDNNNSLV----NYKSDKGIDL 307
Query: 136 QNKLSNLKTVDXXXXXXXXXXXXXXTIEKKLNDK 169
NK+ ++T T+EKK +D+
Sbjct: 308 HNKMMKIET----------DKNGIITLEKKKHDE 331
>gi|50057262|emb|CAH03246.1| hypothetical protein with coiled-coil
domains [Paramecium tetraurelia]
ref|YP_053977.1| hypothetical protein with coiled-coil domains [Paramecium
tetraurelia]
Length = 786
Score = 35.8 bits (81), Expect = 0.47
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 75 FEKEKSQLENELNEYIRNNQMIDLQITQYLSSTSKNNSDYDLNNKYIFERIEYYKNKQID 134
+ E L+N++ Y N+ I Q+ Q L S+ N D ++ + EYY+NK +
Sbjct: 529 YYSENESLQNQVKAYKLKNEQISQQLQQQLLLQSQMNQDDEIE-----KLKEYYENKIVM 583
Query: 135 LQNKLSNLK 143
L +LS L+
Sbjct: 584 LTMELSRLR 592
>gi|23510060|ref|NP_702726.1| hypothetical protein [Plasmodium
falciparum 3D7]
emb|CAB62847.1| hypothetical protein [Plasmodium falciparum 3D7]
Length = 405
Score = 35.0 bits (79), Expect = 0.80
Identities = 15/65 (23%), Positives = 36/65 (55%)
Query: 77 KEKSQLENELNEYIRNNQMIDLQITQYLSSTSKNNSDYDLNNKYIFERIEYYKNKQIDLQ 136
K K + +N+ ++N+++ ++T ++ + NNSD + NN + +Y KN+++ +
Sbjct: 90 KHKKKSTMLINKELQNDKIFKTEMTSNNNNNNNNNSDINNNNNHHHNNHDYNKNEKVKCK 149
Query: 137 NKLSN 141
+ N
Sbjct: 150 YSICN 154
>gi|23507861|ref|NP_700531.1| regulator of nonsense transcripts,
putative [Plasmodium falciparum 3D7]
gb|AAN35255.1| regulator of nonsense transcripts, putative [Plasmodium falciparum
3D7]
Length = 1554
Score = 35.0 bits (79), Expect = 0.80
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 77 KEKSQLENEL--NEYIRNNQMIDLQITQYLSSTSKNN------SDYDLNNKYIFERIEYY 128
K K++ E + N++++NN I+ Y S NN +YDL NK +E+ Y
Sbjct: 151 KHKNEHEQQYYSNKHMKNNSECLSDISSYTDIRSCNNVEDGIYDEYDLTNKMKYEKTNKY 210
Query: 129 KNKQIDLQNKLSN 141
KNK +NK+ +
Sbjct: 211 KNKN---KNKMDD 220
>gi|23480300|gb|EAA16896.1| hypothetical protein [Plasmodium yoelii
yoelii]
Length = 1010
Score = 35.0 bits (79), Expect = 0.80
Identities = 18/53 (33%), Positives = 28/53 (51%)
Query: 78 EKSQLENELNEYIRNNQMIDLQITQYLSSTSKNNSDYDLNNKYIFERIEYYKN 130
E SQ + + +YI++ Q + + SKNN +Y+ N+ YIF E Y N
Sbjct: 718 ENSQEQISIIQYIKSIQNSNYKAKNKQKVDSKNNKEYNQNDSYIFNINELYNN 770
Database: /home/dicty1/resource/WorkingDBs//nr-clean
Posted date: Mar 10, 2005 12:10 PM
Number of letters in database: 788,375,511
Number of sequences in database: 2,329,665
Lambda K H
0.307 0.127 0.319
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 148,145,698
Number of Sequences: 2329665
Number of extensions: 4575334
Number of successful extensions: 15669
Number of sequences better than 1.0: 11
Number of HSP's better than 1.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 15658
Number of HSP's gapped (non-prelim): 17
length of query: 173
length of database: 788,375,511
effective HSP length: 118
effective length of query: 55
effective length of database: 513,475,041
effective search space: 28241127255
effective search space used: 28241127255
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 79 (35.0 bits)
BLASTP 2.2.1 [Jul-12-2001]