Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DDB0187694
         (494 letters)

Database: /home/dicty1/resource/WorkingDBs//nr-clean
           2,329,665 sequences; 788,375,511 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gi|45657019|ref|YP_001105.1| hypothetical protein LIC11135 [Lept...    46  0.002
gi|45656355|ref|YP_000441.1| hypothetical protein LIC10457 [Lept...    42  0.031

>gi|45657019|ref|YP_001105.1| hypothetical protein LIC11135
           [Leptospira interrogans serovar Copenhageni str. Fiocruz
           L1-130]
 ref|NP_713102.1| hypothetical protein LA2922 [Leptospira interrogans serovar Lai
           str. 56601]
 gb|AAN50120.1| hypothetical protein [Leptospira interrogans serovar lai str.
           56601]
 gb|AAS69742.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 271

 Score = 46.2 bits (108), Expect = 0.002
 Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 6/157 (3%)

Query: 316 KQIDYPIKSTVIEWLCLQDPSKPFSETRPPL-PGQQHSGLGVTKQINNLLVHLATIQNRD 374
           K++D+  K   I+WL  Q+      + +  L  GQ++ GL +  +I + +  LA      
Sbjct: 108 KKLDHSYKLVYIDWLLTQNLKMKNMKAKKKLYQGQEYPGLSLMNEITSFIKILAAKLGAY 167

Query: 375 CLLNKPFRFYNAFFYQTREYFYIDPGVQAIFLSLLNDIEESISKFGLAPISWAFEFGCVK 434
              N P  F++A  +  + + ++DP  +  F ++L    +S ++  L  +S       + 
Sbjct: 168 GAFNIPEYFHDAVLFH-KSFQFVDPEKEGRFRAIL----QSFNRTNLRELSDQIHKEKIY 222

Query: 435 EKATGNTVKWEFHKQIKPISPRMKNYFKSKLYIKSVQ 471
           E +TGN   W++ + +  I+  +      + Y K V+
Sbjct: 223 EVSTGNIYIWKYGEMVSCINSYLDATLFDEEYDKKVK 259


>gi|45656355|ref|YP_000441.1| hypothetical protein LIC10457
           [Leptospira interrogans serovar Copenhageni str. Fiocruz
           L1-130]
 ref|NP_713969.1| hypothetical protein LA3789 [Leptospira interrogans serovar Lai
           str. 56601]
 gb|AAN50987.1| hypothetical protein [Leptospira interrogans serovar lai str.
           56601]
 gb|AAS69078.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 264

 Score = 42.4 bits (98), Expect = 0.031
 Identities = 32/148 (21%), Positives = 68/148 (45%), Gaps = 7/148 (4%)

Query: 323 KSTVIEWLCLQDPSKPFSETRPPLPGQQHSGLGVTKQINNLLVHLATIQNRDCLLNKPFR 382
           K  +I WL  + P     +     PGQ   GLG+  QI++ +  L      +  + +P  
Sbjct: 110 KYLIINWLQTRHPKSQTMDKSRLYPGQDVPGLGIFHQISDFIGFLILSLRLNGSVIRPEY 169

Query: 383 FYNAFFYQTREYFYIDPGVQAIFLSLLNDIEESISKFGLAPISWAFEFGCVKEKATGNTV 442
           F++A  + ++++ ++ P  QA+F++L  D +       +  IS     G ++     + +
Sbjct: 170 FHDAVLF-SKKFRFLTPESQALFIALRRDFKNQ----SIRGISTDLHSGKIQNHK--DIL 222

Query: 443 KWEFHKQIKPISPRMKNYFKSKLYIKSV 470
           KW+  + I  +   + ++  +K + K V
Sbjct: 223 KWKAVEMILFLEKTLNSFVFNKKFDKKV 250


  Database: /home/dicty1/resource/WorkingDBs//nr-clean
    Posted date:  Mar 10, 2005 12:10 PM
  Number of letters in database: 788,375,511
  Number of sequences in database:  2,329,665
  
Lambda     K      H
   0.319    0.138    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 703,747,052
Number of Sequences: 2329665
Number of extensions: 28623552
Number of successful extensions: 95324
Number of sequences better than  1.0: 2
Number of HSP's better than  1.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 95324
Number of HSP's gapped (non-prelim): 3
length of query: 494
length of database: 788,375,511
effective HSP length: 132
effective length of query: 362
effective length of database: 480,859,731
effective search space: 174071222622
effective search space used: 174071222622
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 85 (37.4 bits)
BLASTP 2.2.1 [Jul-12-2001]