Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DDB0186649
         (1251 letters)

Database: /home/dicty1/resource/WorkingDBs//nr-clean
           2,329,665 sequences; 788,375,511 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gi|6562677|emb|CAB62838.1| hypothetical protein L5529.07 [Leishm...    68  2e-09
gi|15893745|ref|NP_347094.1| Predicted ATP transporter permease ...    41  0.20

>gi|6562677|emb|CAB62838.1| hypothetical protein L5529.07
           [Leishmania major]
          Length = 1104

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 55/270 (20%), Positives = 121/270 (44%), Gaps = 5/270 (1%)

Query: 581 DVDSMTFNNGVFRMLGAKFSFIIELIVSKTIIFTIPSIILGLIISQIFLVIVVDQLKSIS 640
           + +   F   + R  G   + II ++V +T+ FT+P   +G++++     I+   L + +
Sbjct: 420 NAEERQFELAMIRAQGMSRTQIIGILVMQTLAFTVPGTAVGVLLACATNAILERMLSNFT 479

Query: 641 NSADISKYLTVNSILFSILFGFLIPMVSLILPIRKALSFSLNQQLDTSRSKISSHQITTI 700
                   + + +I+  IL G L+P+V+   P+++ALS SL   LD  R   +   +  I
Sbjct: 480 KVPARLGDVPITAIVIGILMGLLLPLVATYSPVKRALSSSLRDALDIYRQVYNEAHVKAI 539

Query: 701 DKGSKDAEFKKSVSLIGLSISAFGIVVCFLLPKLLLSGDXXXXXXXXXXXXXXXXXXXIF 760
              +      +   L+GL +   G +V +L+P   LS                       
Sbjct: 540 RLEAMGLRMWQ--ILLGLFLVFAGFLVYYLMP---LSFIFSNMMMFFILLDFVLICMIAG 594

Query: 761 LMMNFHLIISKTLVYLITLIDPGAKYIIRRILYKNLISHKKKNKGTMFMFGISVSLIITI 820
           L M  +++     V+++ L+  G +  ++ ++ KNL SH+ +N     M  +SV+ ++  
Sbjct: 595 LCMMTYVVQGPAEVFVLYLLLWGRETRLQTLIRKNLRSHRDRNSKAYMMVLLSVACLVAS 654

Query: 821 SCLYLVQVETANASRKQYYGSLLKIETETF 850
             ++ +    ++   +   G+ + + +++F
Sbjct: 655 GMMFSMMSTISSQLAELTTGAPVTVVSKSF 684


>gi|15893745|ref|NP_347094.1| Predicted ATP transporter permease
           component [Clostridium acetobutylicum ATCC 824]
 gb|AAK78434.1| Predicted ATP transporter permease component [Clostridium
           acetobutylicum ATCC 824]
 pir||G96955 probable ATP transporter permease component CAC0454 [imported] -
           Clostridium acetobutylicum
          Length = 832

 Score = 41.2 bits (95), Expect = 0.20
 Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 2/89 (2%)

Query: 590 GVFRMLGAKFSFIIELIVSKTIIFTIPSIILGLI--ISQIFLVIVVDQLKSISNSADISK 647
           G+ R +GA    I  +I  +  I  I  I LG++  I+ I ++ ++  L   S   DI+ 
Sbjct: 289 GILRSVGASNYQIKSVIFIEAFIMIILGIPLGVLCGIAAIKILFLIVTLSKFSMFVDINI 348

Query: 648 YLTVNSILFSILFGFLIPMVSLILPIRKA 676
           Y++   I+ SI+FG L  + S I+P+ K+
Sbjct: 349 YISSRVIVSSIIFGVLCIIFSSIVPVIKS 377


  Database: /home/dicty1/resource/WorkingDBs//nr-clean
    Posted date:  Mar 10, 2005 12:10 PM
  Number of letters in database: 788,375,511
  Number of sequences in database:  2,329,665
  
Lambda     K      H
   0.320    0.138    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,432,206,490
Number of Sequences: 2329665
Number of extensions: 53348231
Number of successful extensions: 138241
Number of sequences better than  1.0: 2
Number of HSP's better than  1.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 138238
Number of HSP's gapped (non-prelim): 5
length of query: 1251
length of database: 788,375,511
effective HSP length: 139
effective length of query: 1112
effective length of database: 464,552,076
effective search space: 516581908512
effective search space used: 516581908512
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 90 (39.3 bits)
BLASTP 2.2.1 [Jul-12-2001]