Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DDB0186645
(1151 letters)
Database: /home/dicty1/resource/WorkingDBs//nr-clean
2,329,665 sequences; 788,375,511 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|6562677|emb|CAB62838.1| hypothetical protein L5529.07 [Leishm... 184 1e-44
gi|56707553|ref|YP_169449.1| lipoprotein releasing system, subun... 65 2e-08
gi|15669701|ref|NP_248514.1| hypothetical protein MJ1507 [Methan... 59 9e-07
gi|50589966|ref|ZP_00331419.1| COG0577: ABC-type antimicrobial p... 58 1e-06
gi|29607203|dbj|BAC71262.1| putative ABC transporter integral me... 58 1e-06
gi|45358197|ref|NP_987754.1| hypothetical protein MMP0634 [Metha... 57 4e-06
gi|48844871|ref|ZP_00299165.1| COG0577: ABC-type antimicrobial p... 57 4e-06
gi|48841198|ref|ZP_00298124.1| COG0577: ABC-type antimicrobial p... 57 4e-06
gi|37520063|ref|NP_923440.1| hypothetical protein gll0494 [Gloeo... 56 6e-06
gi|48839337|ref|ZP_00296270.1| COG0577: ABC-type antimicrobial p... 56 7e-06
gi|49474194|ref|YP_032236.1| Lipoprotein releasing system transm... 55 1e-05
gi|15903868|ref|NP_359418.1| hypothetical protein spr1826 [Strep... 55 2e-05
gi|58338181|ref|YP_194766.1| ABC transporter ATP binding protein... 55 2e-05
gi|23475614|ref|ZP_00130898.1| COG0577: ABC-type antimicrobial p... 55 2e-05
gi|10241793|emb|CAC09551.1| putative ABC transport system integr... 54 2e-05
gi|53723341|ref|YP_112326.1| putative permease [Burkholderia pse... 54 4e-05
gi|21227735|ref|NP_633657.1| ABC transporter, ATP-binding protei... 54 4e-05
gi|49475641|ref|YP_033682.1| Lipoprotein releasing system transm... 53 5e-05
gi|20091110|ref|NP_617185.1| ABC transporter, permease protein [... 53 6e-05
gi|57168778|ref|ZP_00367909.1| permease protein, putative [Campy... 53 6e-05
gi|15901836|ref|NP_346440.1| hypothetical protein SP2013 [Strept... 53 6e-05
gi|53715894|ref|YP_106592.1| ABC transporter, permease protein, ... 53 6e-05
gi|15897947|ref|NP_342552.1| hypothetical protein SSO1080 [Sulfo... 52 8e-05
gi|21325766|dbj|BAC00387.1| ABC-type transporter, permease compo... 52 8e-05
gi|23468969|ref|ZP_00124304.1| COG0577: ABC-type antimicrobial p... 52 8e-05
gi|48866288|ref|ZP_00320144.1| COG1136: ABC-type antimicrobial p... 52 1e-04
gi|48845105|ref|ZP_00299393.1| COG0577: ABC-type antimicrobial p... 52 1e-04
gi|50120448|ref|YP_049615.1| putative permease [Erwinia carotovo... 52 1e-04
gi|57240580|ref|ZP_00368529.1| probable integral membrane protei... 52 1e-04
gi|53689376|ref|ZP_00063554.2| COG0577: ABC-type antimicrobial p... 52 1e-04
gi|11496870|ref|NP_045651.1| hypothetical protein BBJ27 [Borreli... 52 1e-04
gi|23103026|ref|ZP_00089519.1| COG4591: ABC-type transport syste... 52 1e-04
gi|19704163|ref|NP_603725.1| ABC transporter permease protein [F... 51 2e-04
gi|48870960|ref|ZP_00323677.1| COG1136: ABC-type antimicrobial p... 51 2e-04
gi|21323171|dbj|BAB97799.1| ABC-type transport systems, involved... 51 2e-04
gi|53685146|ref|ZP_00097994.2| COG1136: ABC-type antimicrobial p... 51 2e-04
gi|23465931|ref|NP_696534.1| large protein with N-terminal simil... 51 2e-04
gi|19551651|ref|NP_599653.1| ABC-type transport system permease ... 51 2e-04
gi|23003154|ref|ZP_00046822.1| COG1136: ABC-type antimicrobial p... 51 2e-04
gi|21674173|ref|NP_662238.1| ABC transporter efflux protein [Chl... 51 2e-04
gi|46580780|ref|YP_011588.1| lipoprotein releasing system, perme... 51 2e-04
gi|49243518|emb|CAG41942.1| putative permease protein [Staphyloc... 51 2e-04
gi|21203338|dbj|BAB94039.1| MW0174 [Staphylococcus aureus subsp.... 51 2e-04
gi|46141854|ref|ZP_00147321.2| COG0577: ABC-type antimicrobial p... 51 2e-04
gi|54307852|ref|YP_128872.1| hypothetical protein PBPRA0649 [Pho... 50 3e-04
gi|11498622|ref|NP_069850.1| hypothetical protein AF1017 [Archae... 50 3e-04
gi|41718726|ref|ZP_00147695.1| COG0577: ABC-type antimicrobial p... 50 3e-04
gi|57238673|ref|YP_179804.1| ABC transporter, permease protein [... 50 4e-04
gi|20089338|ref|NP_615413.1| hypothetical protein MA0447 [Methan... 50 4e-04
gi|45358434|ref|NP_987991.1| hypothetical protein MMP0871 [Metha... 50 4e-04
gi|24377785|gb|AAN59077.1| putative ABC transporter, membrane pr... 50 4e-04
gi|34763698|ref|ZP_00144622.1| EXPORT ABC TRANSPORTER PERMEASE P... 50 4e-04
gi|6969078|emb|CAB73649.1| putative integral membrane protein [C... 50 4e-04
gi|51245480|ref|YP_065364.1| similar to lipoprotein releasing sy... 50 4e-04
gi|4098079|gb|AAD09219.1| ABC transporter membrane protein subun... 50 4e-04
gi|23335401|ref|ZP_00120637.1| COG1136: ABC-type antimicrobial p... 50 4e-04
gi|9658285|gb|AAF96752.1| conserved hypothetical protein [Vibrio... 50 5e-04
gi|28900079|ref|NP_799734.1| putative ABC transporter, ATP-bindi... 50 5e-04
gi|21227053|ref|NP_632975.1| ABC transporter, permease protein [... 50 5e-04
gi|49236576|ref|ZP_00330634.1| COG0577: ABC-type antimicrobial p... 50 5e-04
gi|56414005|ref|YP_151080.1| conserved hypothetical ABC transpor... 49 7e-04
gi|42524549|ref|NP_969929.1| ABC-type lipoprotein transporter, p... 49 7e-04
gi|28898771|ref|NP_798376.1| hypothetical protein VP1997 [Vibrio... 49 7e-04
gi|29655095|ref|NP_820787.1| ABC transporter, permease protein [... 49 7e-04
gi|50365077|ref|YP_053502.1| unknown substrate ABC transporter p... 49 9e-04
gi|51596268|ref|YP_070459.1| putative ABC transporter, permease ... 49 9e-04
gi|29142412|ref|NP_805754.1| conserved hypothetical ABC transpor... 49 9e-04
gi|32263408|gb|AAP78453.1| ABC transporter [Helicobacter hepatic... 49 9e-04
gi|15893536|ref|NP_346885.1| Integral membrane protein (permease... 49 9e-04
gi|15602315|ref|NP_245387.1| hypothetical protein PM0450 [Pasteu... 49 9e-04
gi|16419454|gb|AAL19878.1| putative ABC superfamily (atp&memb) t... 49 9e-04
gi|32812399|emb|CAD97587.1| putative ABC transporter permease [C... 49 9e-04
gi|19577297|emb|CAD27717.1| membrane subunit [Enterococcus faeca... 49 9e-04
gi|28208730|gb|AAO37412.1| ABC transporter-associated permease [... 49 9e-04
gi|23474714|ref|ZP_00130006.1| COG0577: ABC-type antimicrobial p... 49 9e-04
gi|20806779|ref|NP_621950.1| ABC-type transport systems, involve... 49 0.001
gi|50843475|ref|YP_056702.1| ABC transporter associated permease... 49 0.001
gi|50841543|ref|YP_054770.1| ABC transporter associated permease... 49 0.001
gi|28211463|ref|NP_782407.1| ABC transporter ATP-binding protein... 49 0.001
gi|42519858|ref|NP_965788.1| ABC transporter permease component ... 49 0.001
gi|2879915|dbj|BAA24813.1| bacI [Enterococcus faecalis] 49 0.001
gi|9658205|gb|AAF96679.1| conserved hypothetical protein [Vibrio... 48 0.002
gi|34557888|ref|NP_907703.1| INTEGRAL MEMBRANE PROTEIN-Permease ... 48 0.002
gi|21228993|ref|NP_634915.1| ABC transporter, permease protein [... 48 0.002
gi|21228952|ref|NP_634874.1| ABC transporter, permease protein [... 48 0.002
gi|1787105|gb|AAC73966.1| macrolide-specific ABC-type efflux car... 48 0.002
gi|12513909|gb|AAG55261.1| putative ATP-binding component of a t... 48 0.002
gi|53798558|ref|ZP_00358981.1| COG0577: ABC-type antimicrobial p... 48 0.002
gi|13360424|dbj|BAB34388.1| putative ATP-binding component of a ... 48 0.002
gi|24112255|ref|NP_706765.1| putative ATP-binding component of a... 48 0.002
gi|16119402|ref|NP_396108.1| hypothetical protein AGR_pAT_247 [A... 48 0.002
gi|29377448|ref|NP_816602.1| permease, putative [Enterococcus fa... 48 0.002
gi|16264103|ref|NP_436895.1| hypothetical protein SMb20369 [Sino... 48 0.002
gi|45656137|ref|YP_000223.1| lipoprotein releasing system transm... 48 0.002
gi|24212973|ref|NP_710454.1| Lipoprotein releasing system transm... 48 0.002
gi|48853908|ref|ZP_00308073.1| COG4591: ABC-type transport syste... 48 0.002
gi|48826283|ref|ZP_00287505.1| COG1136: ABC-type antimicrobial p... 48 0.002
gi|29610750|dbj|BAC74795.1| putative ABC transporter integral me... 48 0.002
gi|23494279|dbj|BAC19246.1| putative ABC transporter permease pr... 48 0.002
gi|41614969|ref|NP_963467.1| hypothetical protein NEQ175 [Nanoar... 47 0.003
gi|22957341|ref|ZP_00005047.1| COG0577: ABC-type antimicrobial p... 47 0.003
gi|51597040|ref|YP_071231.1| ABC transporter(efflux), fused perm... 47 0.003
gi|45442402|ref|NP_993941.1| putative ABC transporter, ATP-bindi... 47 0.003
gi|28899872|ref|NP_799527.1| hypothetical protein VPA0017 [Vibri... 47 0.003
gi|15965824|ref|NP_386177.1| PROBABLE TRANSMEMBRANE ATP-BINDING ... 47 0.003
gi|53798147|ref|ZP_00358744.1| COG0577: ABC-type antimicrobial p... 47 0.003
gi|37520343|ref|NP_923720.1| hypothetical protein gll0774 [Gloeo... 47 0.003
gi|18145202|dbj|BAB81246.1| probable ABC transporter [Clostridiu... 47 0.003
gi|30249074|ref|NP_841144.1| probable ATP-binding/permease fusio... 47 0.003
gi|56460867|ref|YP_156148.1| ABC-type transport system, permease... 47 0.003
gi|15668983|ref|NP_247787.1| hypothetical protein MJ0797 [Methan... 47 0.003
gi|16800924|ref|NP_471192.1| hypothetical protein lin1857 [Liste... 47 0.003
gi|46106219|ref|ZP_00186780.2| COG0577: ABC-type antimicrobial p... 47 0.003
gi|30248829|ref|NP_840899.1| DUF214 [Nitrosomonas europaea ATCC ... 47 0.004
gi|52699287|ref|ZP_00340695.1| COG4591: ABC-type transport syste... 47 0.004
gi|55230250|gb|AAV45669.1| ABC transporter permease protein [Hal... 47 0.004
gi|11499065|ref|NP_070299.1| hypothetical protein AF1470 [Archae... 47 0.004
gi|42784037|ref|NP_981284.1| permease, putative [Bacillus cereus... 47 0.004
gi|25533348|pir||AF2427 hypothetical protein alr4974 [imported] ... 47 0.004
gi|41720646|ref|ZP_00149459.1| COG0577: ABC-type antimicrobial p... 47 0.004
gi|23113782|ref|ZP_00099129.1| COG0577: ABC-type antimicrobial p... 47 0.004
gi|54026627|ref|YP_120869.1| putative ABC transporter permease [... 46 0.006
gi|47566777|ref|ZP_00237495.1| ABC transporter, permease protein... 46 0.006
gi|6458175|gb|AAF10066.1| conserved hypothetical protein [Deinoc... 46 0.006
gi|53730882|ref|ZP_00348995.1| COG0577: ABC-type antimicrobial p... 46 0.006
gi|37520062|ref|NP_923439.1| hypothetical protein gll0493 [Gloeo... 46 0.006
gi|29376226|ref|NP_815380.1| permease protein, putative [Enteroc... 46 0.008
gi|24372410|ref|NP_716452.1| ABC transporter, ATP-binding/permea... 46 0.008
gi|37675675|ref|NP_936071.1| uncharacterized protein conserved i... 46 0.008
gi|20091320|ref|NP_617395.1| hypothetical protein MA2489 [Methan... 46 0.008
gi|28869362|ref|NP_791981.1| macrolide ABC efflux protein [Pseud... 46 0.008
gi|49478827|ref|YP_038974.1| conserved hypothetical protein, pos... 46 0.008
gi|42781142|ref|NP_978389.1| permease, putative domain protein [... 46 0.008
gi|46143385|ref|ZP_00135343.2| COG0577: ABC-type antimicrobial p... 46 0.008
gi|23129026|ref|ZP_00110860.1| COG0577: ABC-type antimicrobial p... 46 0.008
gi|23111965|ref|ZP_00097518.1| COG0577: ABC-type antimicrobial p... 46 0.008
gi|48866054|ref|ZP_00319911.1| COG0577: ABC-type antimicrobial p... 45 0.010
gi|30020133|ref|NP_831764.1| ABC transporter permease protein [B... 45 0.010
gi|56751433|ref|YP_172134.1| probable ABC transporter permease p... 45 0.010
gi|20092755|ref|NP_618830.1| ABC transporter, permease protein [... 45 0.010
gi|48838240|ref|ZP_00295187.1| COG4591: ABC-type transport syste... 45 0.010
gi|28262692|gb|EAA26196.1| unknown [Rickettsia sibirica 246] >gi... 45 0.010
gi|45512240|ref|ZP_00163807.1| COG0577: ABC-type antimicrobial p... 45 0.010
gi|53732302|ref|ZP_00349453.1| COG4591: ABC-type transport syste... 45 0.010
gi|23471760|ref|ZP_00127089.1| COG0577: ABC-type antimicrobial p... 45 0.010
gi|56962482|ref|YP_174208.1| antimicrobial peptide ABC transport... 45 0.013
gi|56477740|ref|YP_159329.1| putative ABC transporter protein [A... 45 0.013
gi|27469323|ref|NP_765960.1| Enterococcus faecalis plasmid pPD1 ... 45 0.013
gi|37525538|ref|NP_928882.1| Macrolide-specific ABC-type efflux ... 45 0.013
gi|15672696|ref|NP_266870.1| ABC transporter ATP-binding and per... 45 0.013
gi|26990902|ref|NP_746327.1| ABC export system, permease/ATP-bin... 45 0.013
gi|28211548|ref|NP_782492.1| ABC transporter ATP-binding protein... 45 0.013
gi|28211095|ref|NP_782039.1| putative permease [Clostridium teta... 45 0.013
gi|45527667|ref|ZP_00178867.1| COG0577: ABC-type antimicrobial p... 45 0.013
gi|41719598|ref|ZP_00148474.1| COG0577: ABC-type antimicrobial p... 45 0.013
gi|23024430|ref|ZP_00063642.1| COG1136: ABC-type antimicrobial p... 45 0.013
gi|23492262|dbj|BAC17236.1| hypothetical protein [Corynebacteriu... 45 0.013
gi|50086114|ref|YP_047624.1| macrolide transport protein (ABC su... 45 0.017
gi|42522295|ref|NP_967675.1| Macrolide specific ABC-type transpo... 45 0.017
gi|29375908|ref|NP_815062.1| ABC transporter, ATP-binding/permea... 45 0.017
gi|52143423|ref|YP_083406.1| ABC transporter, permease [Bacillus... 45 0.017
gi|15602861|ref|NP_245933.1| hypothetical protein PM0996 [Pasteu... 45 0.017
gi|49478780|ref|YP_038881.1| ABC transporter, permease [Bacillus... 45 0.017
gi|49477461|ref|YP_036159.1| possible ABC transporter, permease ... 45 0.017
gi|48838382|ref|ZP_00295326.1| COG0577: ABC-type antimicrobial p... 45 0.017
gi|45524664|ref|ZP_00175935.1| COG0577: ABC-type antimicrobial p... 45 0.017
gi|48841130|ref|ZP_00298056.1| COG0577: ABC-type antimicrobial p... 44 0.022
gi|20090527|ref|NP_616602.1| hypothetical protein MA1674 [Methan... 44 0.022
gi|51473878|ref|YP_067635.1| hypothetical protein RT0694 [Ricket... 44 0.022
gi|21227711|ref|NP_633633.1| ABC transporter, permease protein [... 44 0.022
gi|21227049|ref|NP_632971.1| hypothetical protein MM0947 [Methan... 44 0.022
gi|48870823|ref|ZP_00323541.1| COG1136: ABC-type antimicrobial p... 44 0.022
gi|46141853|ref|ZP_00147320.2| COG0577: ABC-type antimicrobial p... 44 0.022
gi|23127807|ref|ZP_00109668.1| COG0577: ABC-type antimicrobial p... 44 0.022
gi|30020672|ref|NP_832303.1| ABC transporter permease protein [B... 44 0.029
gi|34557889|ref|NP_907704.1| ABC TRANSPORT PERMEASE PROTEIN-Invo... 44 0.029
gi|19746831|ref|NP_607967.1| putative ABC transporter (permease)... 44 0.029
gi|28900728|ref|NP_800383.1| putative permease [Vibrio parahaemo... 44 0.029
gi|28896559|ref|NP_802909.1| putative ABC transporter (permease)... 44 0.029
gi|38234455|ref|NP_940222.1| Putative ABC transport system perme... 44 0.029
gi|45358084|ref|NP_987641.1| ABC transporter, permease protein [... 44 0.029
gi|15892999|ref|NP_360713.1| hypothetical protein RC1076 [Ricket... 44 0.029
gi|21911183|ref|NP_665451.1| putative ABC transporter (permease)... 44 0.029
gi|21672810|ref|NP_660877.1| DNA mismatch repair protein MutL [B... 44 0.029
gi|6968074|emb|CAB75243.1| ABC-type transmembrane transport prot... 44 0.029
gi|13622940|gb|AAK34616.1| putative ABC transporter (permease) a... 44 0.029
gi|46313606|ref|ZP_00214195.1| COG4591: ABC-type transport syste... 44 0.029
gi|46311285|ref|ZP_00211894.1| COG0577: ABC-type antimicrobial p... 44 0.029
gi|53764648|ref|ZP_00160587.2| COG0577: ABC-type antimicrobial p... 44 0.029
gi|23129054|ref|ZP_00110888.1| COG0577: ABC-type antimicrobial p... 44 0.029
gi|48731879|ref|ZP_00265623.1| COG0577: ABC-type antimicrobial p... 44 0.037
gi|34104014|gb|AAQ60374.1| probable ABC transporter, ATP-binding... 44 0.037
gi|25045975|gb|AAN71839.1| SA0193/BacI-like protein [Staphylococ... 44 0.037
gi|46198957|ref|YP_004624.1| ABC transporter permease protein [T... 44 0.037
gi|56808776|ref|ZP_00366492.1| COG0577: ABC-type antimicrobial p... 44 0.037
gi|16799496|ref|NP_469764.1| hypothetical protein lin0419 [Liste... 44 0.037
gi|28870017|ref|NP_792636.1| macrolide ABC efflux protein MacB [... 44 0.037
gi|52140310|ref|YP_086520.1| ABC transporter, permease [Bacillus... 44 0.037
gi|52425184|ref|YP_088321.1| hypothetical protein MS1129 [Mannhe... 44 0.037
gi|50914982|ref|YP_060954.1| ABC transporter permease protein [S... 44 0.037
gi|49477788|ref|YP_036710.1| ABC transporter, permease [Bacillus... 44 0.037
gi|49185436|ref|YP_028688.1| predicted permease [Bacillus anthra... 44 0.037
gi|49184868|ref|YP_028120.1| ABC transporter, permease [Bacillus... 44 0.037
gi|42784417|ref|NP_981664.1| ABC transporter, permease protein [... 44 0.037
gi|21226193|ref|NP_632115.1| ABC transporter permease protein [M... 44 0.037
gi|32487246|emb|CAD91213.1| putative ABC transporter, Dbv18 [Non... 44 0.037
gi|46318353|ref|ZP_00218816.1| COG0577: ABC-type antimicrobial p... 44 0.037
gi|45507937|ref|ZP_00160278.1| COG0577: ABC-type antimicrobial p... 44 0.037
gi|49474723|ref|YP_032765.1| ABC transporter, ATP-binding protei... 43 0.049
gi|51595731|ref|YP_069922.1| putative ABC transporter with fused... 43 0.049
gi|45441056|ref|NP_992595.1| putative ABC transporter ATP-bindin... 43 0.049
gi|37526626|ref|NP_929970.1| hypothetical protein plu2736 [Photo... 43 0.049
gi|46446850|ref|YP_008215.1| hypothetical protein pc1216 [Parach... 43 0.049
gi|15893817|ref|NP_347166.1| Predicted permease, domain duplicat... 43 0.049
gi|52142890|ref|YP_083939.1| ABC transporter, permease [Bacillus... 43 0.049
gi|42527022|ref|NP_972120.1| permease domain protein [Treponema ... 43 0.049
gi|39996266|ref|NP_952217.1| ABC transporter, permease protein [... 43 0.049
gi|47091701|ref|ZP_00229497.1| ABC transporter, ATP-binding/perm... 43 0.049
gi|46312832|ref|ZP_00213425.1| COG4591: ABC-type transport syste... 43 0.049
gi|32034668|ref|ZP_00134806.1| COG0577: ABC-type antimicrobial p... 43 0.049
gi|57238197|ref|YP_178722.1| macrolide-specific efflux protein m... 43 0.064
gi|9656074|gb|AAF94720.1| conserved hypothetical protein [Vibrio... 43 0.064
gi|50119829|ref|YP_048996.1| macrolide-specific ABC-type efflux ... 43 0.064
gi|54302804|ref|YP_132797.1| hypothetical protein PBPRB1125 [Pho... 43 0.064
gi|20091377|ref|NP_617452.1| ABC transporter, permease protein [... 43 0.064
gi|16802786|ref|NP_464271.1| hypothetical protein lmo0744 [Liste... 43 0.064
gi|52140665|ref|YP_086164.1| ABC transporter, permease [Bacillus... 43 0.064
gi|49480397|ref|YP_039244.1| ABC transporter, permease [Bacillus... 43 0.064
gi|46906989|ref|YP_013378.1| ABC transporter, ATP-binding/permea... 43 0.064
gi|42782273|ref|NP_979520.1| permease, putative [Bacillus cereus... 43 0.064
gi|29346875|ref|NP_810378.1| putative ABC transporter permease [... 43 0.064
gi|47570537|ref|ZP_00241163.1| ABC transporter, ATP-binding prot... 43 0.064
gi|47095309|ref|ZP_00232920.1| ABC transporter, ATP-binding/perm... 43 0.064
gi|23114561|ref|ZP_00099857.1| COG0577: ABC-type antimicrobial p... 43 0.064
gi|13471429|ref|NP_102995.1| permease protein of ABC transporter... 42 0.083
gi|27359141|gb|AAO08086.1| ABC-type transport system, involved i... 42 0.083
gi|30023285|ref|NP_834916.1| ABC transporter permease protein [B... 42 0.083
gi|17935707|ref|NP_532497.1| hypothetical protein Atu1817 [Agrob... 42 0.083
gi|20089271|ref|NP_615346.1| hypothetical protein MA0374 [Methan... 42 0.083
gi|15604541|ref|NP_221059.1| hypothetical protein RP699 [Rickett... 42 0.083
gi|52144528|ref|YP_082297.1| ABC transporter, permease [Bacillus... 42 0.083
gi|49478774|ref|YP_038868.1| ABC transporter, permease [Bacillus... 42 0.083
gi|32476756|ref|NP_869750.1| putative ABC transporter integral m... 42 0.083
gi|47568011|ref|ZP_00238717.1| ABC transporter, permease protein... 42 0.083
gi|15156928|gb|AAK87586.1| AGR_C_3336p [Agrobacterium tumefacien... 42 0.083
gi|30018973|ref|NP_830604.1| ABC transporter permease protein [B... 42 0.11
gi|27468040|ref|NP_764677.1| hypothetical protein SE1122 [Staphy... 42 0.11
gi|49476201|ref|YP_034242.1| ABC transporter, ATP-binding protei... 42 0.11
gi|16799311|ref|NP_469579.1| hypothetical protein lin0234 [Liste... 42 0.11
gi|42779964|ref|NP_977211.1| ABC transporter, permease protein, ... 42 0.11
gi|47564731|ref|ZP_00235775.1| ABC transporter, ATP-binding prot... 42 0.11
gi|7672272|emb|CAB89462.1| putative ABC transporter integral mem... 42 0.11
gi|21325324|dbj|BAB99945.1| ABC-type transporter, permease compo... 42 0.11
gi|23128822|ref|ZP_00110661.1| COG0577: ABC-type antimicrobial p... 42 0.11
gi|23125987|ref|ZP_00107899.1| COG0577: ABC-type antimicrobial p... 42 0.11
gi|41326732|emb|CAF21214.1| ABC-type transport system, involved ... 42 0.11
gi|34332912|gb|AAQ62055.2| probable ABC transporter, permease p... 42 0.14
gi|30022899|ref|NP_834530.1| ABC transporter permease protein [B... 42 0.14
gi|47777853|ref|YP_017432.2| abc transporter, permease protein, ... 42 0.14
gi|46205775|ref|ZP_00210025.1| COG0577: ABC-type antimicrobial p... 42 0.14
gi|34557766|ref|NP_907581.1| PROBABLE TRANSMEMBRANE ATP-BINDING ... 42 0.14
gi|20092759|ref|NP_618834.1| ABC transporter, permease protein [... 42 0.14
gi|20091991|ref|NP_618066.1| ABC transporter, permease protein [... 42 0.14
gi|52081526|ref|YP_080317.1| possible acetoin transport system s... 42 0.14
gi|16803786|ref|NP_465271.1| hypothetical protein lmo1746 [Liste... 42 0.14
gi|54293825|ref|YP_126240.1| hypothetical protein lpl0881 [Legio... 42 0.14
gi|49478778|ref|YP_038876.1| ABC transporter, permease [Bacillus... 42 0.14
gi|28379048|ref|NP_785940.1| ABC transporter, ATP-binding and pe... 42 0.14
gi|47568004|ref|ZP_00238710.1| permease protein, putative [Bacil... 42 0.14
gi|47095672|ref|ZP_00233279.1| ABC transporter, permease protein... 42 0.14
gi|60280008|gb|AAX16350.1| PA2390 [Pseudomonas aeruginosa] 42 0.14
gi|60279990|gb|AAX16333.1| PA2390 [Pseudomonas aeruginosa] 42 0.14
gi|60279959|gb|AAX16304.1| PA2390 [Pseudomonas aeruginosa] >gi|3... 42 0.14
gi|9948431|gb|AAG05778.1| probable ATP-binding/permease fusion A... 42 0.14
gi|22298926|ref|NP_682173.1| ABC transporter permease protein [T... 42 0.14
gi|45508143|ref|ZP_00160483.1| COG0577: ABC-type antimicrobial p... 42 0.14
gi|48855576|ref|ZP_00309735.1| COG4591: ABC-type transport syste... 41 0.19
gi|48845918|ref|ZP_00300188.1| COG0577: ABC-type antimicrobial p... 41 0.19
gi|48841243|ref|ZP_00298169.1| COG0577: ABC-type antimicrobial p... 41 0.19
gi|34105249|gb|AAQ61604.1| conserved hypothetical protein [Chrom... 41 0.19
gi|47530383|ref|YP_021732.1| abc transporter, permease protein [... 41 0.19
gi|53715757|ref|YP_101749.1| hypothetical protein BF4478 [Bacter... 41 0.19
gi|20089984|ref|NP_616059.1| ABC transporter, permease protein [... 41 0.19
gi|16802241|ref|NP_463726.1| hypothetical protein lmo0195 [Liste... 41 0.19
gi|52140675|ref|YP_086155.1| ABC transporter, permease [Bacillus... 41 0.19
gi|15605828|ref|NP_213205.1| hypothetical protein aq_296 [Aquife... 41 0.19
gi|50955083|ref|YP_062371.1| ABC transporter, permease protein [... 41 0.19
gi|46907976|ref|YP_014365.1| ABC transporter, permease protein [... 41 0.19
gi|46906427|ref|YP_012816.1| ABC transporter, permease protein [... 41 0.19
gi|32474570|ref|NP_867564.1| probable ATP-binding/permease fusio... 41 0.19
gi|29348247|ref|NP_811750.1| hypothetical protein BT2838 [Bacter... 41 0.19
gi|29346625|ref|NP_810128.1| ABC transporter, permease protein [... 41 0.19
gi|21229115|ref|NP_635037.1| ABC transporter, permease protein [... 41 0.19
gi|18314231|ref|NP_560898.1| hypothetical protein PAE3663 [Pyrob... 41 0.19
gi|48857498|ref|ZP_00311497.1| COG0577: ABC-type antimicrobial p... 41 0.19
gi|48839504|ref|ZP_00296435.1| COG0577: ABC-type antimicrobial p... 41 0.19
gi|47096188|ref|ZP_00233787.1| ABC transporter, permease protein... 41 0.19
gi|47092899|ref|ZP_00230681.1| ABC transporter, permease protein... 41 0.19
gi|11245964|gb|AAG32540.1| SalY [Streptococcus salivarius] 41 0.19
gi|53684160|ref|ZP_00103626.2| COG0577: ABC-type antimicrobial p... 41 0.19
gi|37519914|ref|NP_923291.1| hypothetical protein gll0345 [Gloeo... 41 0.19
gi|39648569|emb|CAE27090.1| predicted ABC-type transport systems... 41 0.24
gi|27358967|gb|AAO07915.1| ABC-type antimicrobial peptide transp... 41 0.24
gi|30022892|ref|NP_834523.1| ABC transporter permease protein [B... 41 0.24
gi|56750336|ref|YP_171037.1| ABC transporter permease protein [S... 41 0.24
gi|56413795|ref|YP_150870.1| ABC transporter integral membrane s... 41 0.24
gi|37677158|ref|NP_937554.1| ABC-type antimicrobial peptide tran... 41 0.24
gi|54302050|ref|YP_132043.1| hypothetical protein PBPRB0370 [Pho... 41 0.24
gi|52841086|ref|YP_094885.1| ABC transporter, permease protein [... 41 0.24
gi|29142135|ref|NP_805477.1| ABC transporter integral membrane s... 41 0.24
gi|37526538|ref|NP_929882.1| hypothetical protein plu2647 [Photo... 41 0.24
gi|16080093|ref|NP_390919.1| hypothetical protein BSU30410 [Baci... 41 0.24
gi|15900680|ref|NP_345284.1| hypothetical protein SP0787 [Strept... 41 0.24
gi|22002528|gb|AAM82679.1| DevC [Synechococcus sp. PCC 7942] >gi... 41 0.24
gi|60495122|emb|CAH09943.1| putative lipoprotein releasing syste... 41 0.24
gi|21229200|ref|NP_635122.1| ABC transporter, permease protein [... 41 0.24
gi|52549161|gb|AAU83010.1| ABC transporter permease protein [unc... 41 0.24
gi|16419737|gb|AAL20148.1| integral membrane protein ABC transpo... 41 0.24
gi|47565256|ref|ZP_00236298.1| ABC transporter, ATP-binding prot... 41 0.24
gi|29607180|dbj|BAC71239.1| putative ABC transporter integral me... 41 0.24
gi|15902739|ref|NP_358289.1| hypothetical protein spr0695 [Strep... 41 0.24
gi|48845381|ref|ZP_00299663.1| COG4591: ABC-type transport syste... 40 0.32
gi|15789343|ref|NP_279167.1| hypothetical protein VNG0003C [Halo... 40 0.32
gi|47530813|ref|YP_022162.1| abc transporter, permease protein [... 40 0.32
gi|53712889|ref|YP_098881.1| putative ABC transporter permease [... 40 0.32
gi|29377226|ref|NP_816380.1| permease protein, putative [Enteroc... 40 0.32
gi|15602427|ref|NP_245499.1| hypothetical protein PM0562 [Pasteu... 40 0.32
gi|60492541|emb|CAH07312.1| putative FtsX-related transmembrane ... 40 0.32
gi|47568731|ref|ZP_00239427.1| ABC transporter, permease protein... 40 0.32
gi|21685503|emb|CAD30167.1| putative ABC-transporter permease pr... 40 0.32
gi|23023499|ref|ZP_00062734.1| COG0577: ABC-type antimicrobial p... 40 0.32
gi|23126910|ref|ZP_00108791.1| COG0577: ABC-type antimicrobial p... 40 0.32
gi|23121201|ref|ZP_00103576.1| COG0577: ABC-type antimicrobial p... 40 0.32
gi|48826271|ref|ZP_00287493.1| COG0577: ABC-type antimicrobial p... 40 0.41
gi|33861470|ref|NP_893031.1| possible ABC transporter [Prochloro... 40 0.41
gi|3323283|gb|AAC65917.1| conserved hypothetical integral membra... 40 0.41
gi|30022906|ref|NP_834537.1| ABC transporter permease protein [B... 40 0.41
gi|24375188|ref|NP_719231.1| ABC transporter, permease protein [... 40 0.41
gi|53721660|ref|YP_110645.1| macrolide-specific ABC-type efflux ... 40 0.41
gi|12514668|gb|AAG55864.1| putative kinase [Escherichia coli O15... 40 0.41
gi|46310933|ref|ZP_00211548.1| COG0577: ABC-type antimicrobial p... 40 0.41
gi|53765495|ref|ZP_00161853.2| COG0577: ABC-type antimicrobial p... 40 0.41
gi|46140814|ref|ZP_00203756.1| COG0577: ABC-type antimicrobial p... 40 0.41
gi|48859411|ref|ZP_00313346.1| COG0577: ABC-type antimicrobial p... 40 0.54
gi|56476438|ref|YP_158027.1| transmembrane ATP-binding ABC trans... 40 0.54
gi|34397272|gb|AAQ66335.1| membrane protein, putative [Porphyrom... 40 0.54
gi|53713160|ref|YP_099152.1| ABC transporter permease protein [B... 40 0.54
gi|42560863|ref|NP_975314.1| Predicted permease [Mycoplasma myco... 40 0.54
gi|57242014|ref|ZP_00369954.1| ABC transporter, ATP-binding prot... 40 0.54
gi|57168779|ref|ZP_00367910.1| ABC transporter, ATP-binding prot... 40 0.54
gi|57167636|ref|ZP_00366776.1| ABC transporter, ATP-binding prot... 40 0.54
gi|38233097|ref|NP_938864.1| Putative ABC transport system integ... 40 0.54
gi|54026221|ref|YP_120463.1| putative transporter permease [Noca... 40 0.54
gi|42784030|ref|NP_981277.1| ABC transporter, permease protein [... 40 0.54
gi|48772589|ref|ZP_00276931.1| COG0577: ABC-type antimicrobial p... 40 0.54
gi|47564784|ref|ZP_00235828.1| permease protein, putative [Bacil... 40 0.54
gi|1787362|gb|AAC74202.1| putative kinase; transport protein of ... 40 0.54
gi|25530284|pir||AB2474 hypothetical protein all5346 [imported] ... 40 0.54
gi|41725133|ref|ZP_00151891.1| COG0577: ABC-type antimicrobial p... 40 0.54
gi|23129027|ref|ZP_00110861.1| COG0577: ABC-type antimicrobial p... 40 0.54
gi|53688422|ref|ZP_00109956.2| COG0577: ABC-type antimicrobial p... 40 0.54
gi|30250172|ref|NP_842242.1| DUF214 [Nitrosomonas europaea ATCC ... 39 0.71
gi|57238817|ref|YP_179953.1| putative lipoprotein releasing syst... 39 0.71
gi|24112523|ref|NP_707033.1| putative kinase [Shigella flexneri ... 39 0.71
gi|53757872|gb|AAU92163.1| ABC-transporter permease protein, put... 39 0.71
gi|46199784|ref|YP_005451.1| ABC transporter permease protein [T... 39 0.71
gi|19746917|ref|NP_608053.1| putative ABC transporter (ATP-bindi... 39 0.71
gi|55981802|ref|YP_145099.1| ABC transporter, permease protein [... 39 0.71
gi|56808486|ref|ZP_00366227.1| COG0577: ABC-type antimicrobial p... 39 0.71
gi|21673929|ref|NP_661994.1| hypothetical protein CT1103 [Chloro... 39 0.71
gi|28896643|ref|NP_802993.1| putative ABC transporter (ATP-bindi... 39 0.71
gi|15603689|ref|NP_246763.1| hypothetical protein PM1824 [Pasteu... 39 0.71
gi|50915072|ref|YP_061044.1| ABC transporter permease protein [S... 39 0.71
gi|32475983|ref|NP_868977.1| ABC transporter, ATP-binding protei... 39 0.71
gi|26247262|ref|NP_753302.1| Lipoprotein releasing system transm... 39 0.71
gi|58416418|emb|CAI27531.1| Lipoprotein releasing system transme... 39 0.71
gi|21110023|gb|AAM38484.1| ABC transporter permease [Xanthomonas... 39 0.71
gi|10176298|dbj|BAB07393.1| ABC transporter (ATP-binding protein... 39 0.71
gi|53761955|ref|ZP_00167721.2| COG0577: ABC-type antimicrobial p... 39 0.71
gi|53730885|ref|ZP_00151782.2| COG0577: ABC-type antimicrobial p... 39 0.71
gi|23125762|ref|ZP_00107681.1| COG0577: ABC-type antimicrobial p... 39 0.71
gi|13471386|ref|NP_102952.1| hypothetical protein mll1342 [Mesor... 39 0.92
gi|47530391|ref|YP_021740.1| permease, putative [Bacillus anthra... 39 0.92
gi|23014032|ref|ZP_00053872.1| COG4591: ABC-type transport syste... 39 0.92
gi|54302049|ref|YP_132042.1| hypothetical protein PBPRB0369 [Pho... 39 0.92
gi|16804154|ref|NP_465639.1| hypothetical protein lmo2115 [Liste... 39 0.92
gi|52140664|ref|YP_086165.1| ABC transporter, permease [Bacillus... 39 0.92
gi|49481380|ref|YP_038882.1| ABC transporter, permease [Bacillus... 39 0.92
gi|46908351|ref|YP_014740.1| ABC transporter, permease protein [... 39 0.92
gi|46907443|ref|YP_013832.1| ABC transporter, permease protein [... 39 0.92
gi|10957500|ref|NP_051589.1| hypothetical protein DRB0050 [Deino... 39 0.92
gi|42784038|ref|NP_981285.1| permease, putative [Bacillus cereus... 39 0.92
gi|42527026|ref|NP_972124.1| permease, putative [Treponema denti... 39 0.92
gi|28379430|ref|NP_786322.1| ABC transporter, ATP-binding and pe... 39 0.92
gi|21402884|ref|NP_658869.1| DUF214, Predicted permease [Bacillu... 39 0.92
gi|19703916|ref|NP_603478.1| Lipoprotein releasing system transm... 39 0.92
gi|47095827|ref|ZP_00233432.1| ABC transporter, permease protein... 39 0.92
gi|47092023|ref|ZP_00229817.1| ABC transporter, permease protein... 39 0.92
gi|47091785|ref|ZP_00229580.1| ABC transporter, permease protein... 39 0.92
gi|59711713|ref|YP_204489.1| hypothetical protein VF1106 [Vibrio... 39 0.92
>gi|6562677|emb|CAB62838.1| hypothetical protein L5529.07 [Leishmania
major]
Length = 1104
Score = 184 bits (468), Expect = 1e-44
Identities = 226/1138 (19%), Positives = 447/1138 (38%), Gaps = 156/1138 (13%)
Query: 113 WFRTLLYHWKHFFSHTLRINLRNKLSYLLGFSACFLVVFIVSLCVSIITNTPVVFLSLSE 172
+F TL W + T+ R L+ ++G +A L+VF ++ I TP + L L+E
Sbjct: 19 FFETLKLSWVY----TVADARRRPLNIIIGITAVMLLVFFSAVVFIGIWKTPYILLRLAE 74
Query: 173 ASVGEMDMVLTPGSWTLSDQLNYTMLSELLAGTYKEPNGSYFXXXXXXXQYELEEVDDSY 232
+VGEMD++L G +L LNYT LS+ LA + +
Sbjct: 75 LTVGEMDIILYGGGSSLL--LNYTKLSQSLAKSQVVAGAA-------------------- 112
Query: 233 HSPRVDGTVSVVSAKSCPNGNTNPNDNLWKYHDEPNQCEPYCFESVCSNSVASKASMFVI 292
PR + S + NP + +N V S A++ +I
Sbjct: 113 --PRWIARADLTSEATYRANMHNPAS------------------ARTANRVTS-ANILLI 151
Query: 293 DTAREKRMGLGRDWKLDAPPQGTVYVQENLANKLSIS--KGDTIFIRI------------ 338
++ E+R G+GR W + + A+ + +S KG+ + + I
Sbjct: 152 NSELEQRAGIGRGWPYREIGFDEAQIFFSAASYIGVSGNKGERVHLSINASSLRNAIGIG 211
Query: 339 --------------PTRSFLSSIWTHANITSSTIPV-----IYATATVADTFSSSEGKFP 379
P +L++ + NIT +IP+ + AT+AD ++ GK+
Sbjct: 212 IPSFNITRPQKVTGPISFYLAAFFALNNITEDSIPLFDVVSLSMAATMADAVETTAGKYS 271
Query: 380 SDQSSSIIIEYSTFLPFLITQ---FDPEMNYNSKNYI---------------SKINFYDY 421
S + ++++ FL L+ Q P+ S+ Y + + DY
Sbjct: 272 SALGNVVVMDCRQFLNVLVDQSCLLGPQSISPSEGYYFPTTAELFNISLPSTNSFDIQDY 331
Query: 422 SKQVIINLPPSRLTPYINSNQDVILEKIVDFSNKILYKVGFN-ELSSELPVMSELSKNRY 480
+ V++ L Y N+ Q + + + +NK++ +G + + + + P+ + +
Sbjct: 332 AMMVVVMLEGRYDMYYANTKQRGAM--LTEKANKLMEAIGLSFDGNLQFPLDTTIQTLDV 389
Query: 481 VAXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVETRTFEMGVMRMIGTTRNGIIQLMLFKA 540
+ E R FE+ ++R G +R II +++ +
Sbjct: 390 FRMLMTAACVVVVIGIVVLGLILMFTLLQINAEERQFELAMIRAQGMSRTQIIGILVMQT 449
Query: 541 FSYSVPSWGLGLLIAQVFGFIVSAIFKSITGVPIP-PKLTGEXXXXXXXXXXXXXXXXXX 599
+++VP +G+L+A I+ + + T VP +
Sbjct: 450 LAFTVPGTAVGVLLACATNAILERMLSNFTKVPARLGDVPITAIVIGILMGLLLPLVATY 509
Query: 600 XXXRNALGKNLHDSLDVKHSKTAAVQISIERSEDNSFSSSVALIGSLLSVFGFGIYYVFP 659
+ AL +L D+LD+ + R E L+G L GF +YY+ P
Sbjct: 510 SPVKRALSSSLRDALDIYRQVYNEAHVKAIRLEAMGLRMWQILLGLFLVFAGFLVYYLMP 569
Query: 660 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEQILERAVVNLFFFWEKRAIKSLVIKN 719
V+ E V+ L + + +++L+ KN
Sbjct: 570 LSFIFSNMMMFFILLDFVLICMIAGLCMMTYVVQGPAEVFVLYLLLWGRETRLQTLIRKN 629
Query: 720 LIAHKLRNRKTAIMYAVSLAFIIFVNVSYSMQQASMNYQVQQSYGSYLSVKSSEPFFQPE 779
L +H+ RN K +M +S+A ++ + +SM + + + G+ ++V S F+ P
Sbjct: 630 LRSHRDRNSKAYMMVLLSVACLVASGMMFSMMSTISSQLAELTTGAPVTVVSKS-FWNPL 688
Query: 780 STLLIDQFLSQYQPEIEDYAWESSSFSIMTKQYQQ-SQITNIGHIYSD--GTNMYAISPN 836
+D F+ + + + W +SF++ ++Y Q + T +G + + ++ A++
Sbjct: 689 DQASLDAFM-RGEGSLYAMQWAYTSFAL--REYPQIASRTQVGSLIGNFRTIDVRAVTEF 745
Query: 837 LFATTLPGFLKASSIAPDPDYSLND------IQYLSEQ-------------IYSFTSGQK 877
T P F +S +Y +N I+ + E + F G K
Sbjct: 746 FMDATYPDFNMVNSYRSGYEYPINTFHQRDVIRSMYEDPPHCNVSKKQDIIVNGFPYGVK 805
Query: 878 I-------------IIGSLYTDVIGASIDQSFLLQLNIKSGEASSVNSTRHLVKPSAMLD 924
I II S D+IG ++ + L+ + + ST ++P A+++
Sbjct: 806 IPNVTAKESQVIPMIISSAAQDMIGLDVNSAAQLRFDYFLNNSVQALSTVFYLEPRALVN 865
Query: 925 SAXXXXXXXXXXVTNQDSIVSFPTYLSYASSIFSSVREIPMNQVILKLNTDDKDAVESIK 984
+ + PT + S + +V + +Q+I N + +++
Sbjct: 866 RISGFLAVSSLPILFSQGTILVPTK-HFQSLLNPAVLDFDADQMIFITNHSVLEVRQAVL 924
Query: 985 N-RLNSFLIGNLREDFD-------------MLDYYEKIKPFATASVIIQYFFSFTTVLAM 1030
+L S + + RE F ++D ++ + +I FF FT+V+ +
Sbjct: 925 YVQLRSNVTKHEREIFVNALQAHTNTFYHVIVDTEATVEQLRSVQTLIMGFFYFTSVICI 984
Query: 1031 TISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFIGST 1090
T+ F + ++ SN+ GVL +LG + ++R VYE+ +V+++ G+ +G+
Sbjct: 985 TLCAFMMWTTFISNVQLNAWTFGVLRSLGFRTAQLMRCAVYESLCIVISAFTWGLVVGTA 1044
Query: 1091 VGFTMILQRQLFTMLPIPMTLPWQLIIIVFICSMFFSFFSAFGPIRKVLNQPVVSIMR 1148
VG TM ++ ++P P+ L+IIVF ++ + + P+ + +P+ S++R
Sbjct: 1045 VGVTMAIELCQIMVIPFHFNFPYALVIIVFGMALAAAVVGSIAPLLSLRKKPISSVLR 1102
>gi|56707553|ref|YP_169449.1| lipoprotein releasing system, subunit
C,putative membrane protein [Francisella tularensis
subsp. tularensis Schu 4]
gb|AAV29058.1| NT02FT1680 [synthetic construct]
emb|CAG45037.1| lipoprotein releasing system, subunit C,putative membrane protein
[Francisella tularensis subsp. tularensis Schu 4]
Length = 420
Score = 64.7 bits (156), Expect = 2e-08
Identities = 55/274 (20%), Positives = 119/274 (43%), Gaps = 33/274 (12%)
Query: 875 GQKIIIGSLYTDVIGASIDQSFLLQLNIKSGEASSVNSTRHLVKPSAMLDSAXXXXXXXX 934
G I++GS+ D +G +K G+ ++ + + P+ M+
Sbjct: 150 GYNIVLGSVLADNLG------------VKVGDKVTLIVPKISLTPAGMIPRIKQFRVSGI 197
Query: 935 XXVTNQDSIVSFPTYLSYASSIFSSVREIPMNQVILKLNTDDKDAVESIKNRLNSFLIGN 994
V+ Q + A +F + + Q+ +K D +K++LN G
Sbjct: 198 FSVSYQYDAYYAMINIKDAQKVFETGNSVSSLQLSVKNIYD----APLVKDKLND---GA 250
Query: 995 LREDFDMLDYYEKIKPFATASVIIQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGV 1054
+ + D+ ++ K F A + + F +L +T++ F+L+SS+ + ++ +I +
Sbjct: 251 IPPYYFTRDWTDENKSFFDALKMEKTMMFFILLLIITVAVFNLLSSLVMVVTDKRSDIAI 310
Query: 1055 LCALGIPKSWMIRIYVYEAFVLVMASSMLGMFIG---STVGFTMI-----------LQRQ 1100
L +G+ +I +++Y+ F++ + +++G+ +G ST ++ L
Sbjct: 311 LRTMGMSSRQIITVFIYQGFIIGLIGTVIGVLLGILLSTYATEIVNFIQNLTGKQFLSAS 370
Query: 1101 LFTMLPIPMTLPWQLIIIVFICSMFFSFFSAFGP 1134
++ + IP L W +I V + SMF SF + P
Sbjct: 371 VYLINYIPSELMWSDVIKVTLVSMFLSFLATLYP 404
>gi|15669701|ref|NP_248514.1| hypothetical protein MJ1507
[Methanocaldococcus jannaschii DSM 2661]
gb|AAB99519.1| hypothetical protein MJ1507 [Methanocaldococcus jannaschii DSM 2661]
pir||B64488 hypothetical protein MJ1507 - Methanococcus jannaschii
sp|Q58902|YF07_METJA Hypothetical protein MJ1507
Length = 399
Score = 58.9 bits (141), Expect = 9e-07
Identities = 45/200 (22%), Positives = 88/200 (43%), Gaps = 3/200 (1%)
Query: 937 VTNQDSIVSFPTYLSYASSIFSSVREIPMNQVILKLNTDDKDAVESIKNRLNSFLIGNLR 996
+ NQ S + +F + + V +K D + E IK L G+
Sbjct: 189 IGNQQDDNSIILNIDVGEKLFGNEGKYNFISVTVKEGEDIEKVSEEIKKALKKSF-GD-- 245
Query: 997 EDFDMLDYYEKIKPFATASVIIQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLC 1056
EDF +L + K ++ +I F +++ + + ++++ +ILE+ K+IG+L
Sbjct: 246 EDFSVLTAEQLAKTVSSVLGVITIFVVGVAAISLLVGAVGISNTMHMSILERRKDIGILK 305
Query: 1057 ALGIPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVGFTMILQRQLFTMLPIPMTLPWQLI 1116
ALG + ++ I+V E+ L + ++G+ +G + + L + + W+LI
Sbjct: 306 ALGAETTDILAIFVVESGFLGLFGGIVGLVLGILLAEVIEALAHKMGYLMVNAWISWELI 365
Query: 1117 IIVFICSMFFSFFSAFGPIR 1136
+ V I S S + P R
Sbjct: 366 VGVLIFSFLVGVISGYFPAR 385
>gi|50589966|ref|ZP_00331419.1| COG0577: ABC-type antimicrobial
peptide transport system, permease component
[Streptococcus suis 89/1591]
Length = 415
Score = 58.2 bits (139), Expect = 1e-06
Identities = 80/422 (18%), Positives = 165/422 (38%), Gaps = 60/422 (14%)
Query: 717 IKNLIAHKLRNRKTAIMYAVSLAFIIFV---------NVSYSMQQASMNYQVQQSYGSYL 767
+K+++AHK+R+ T + + +A ++ + ++ S+ N QV +
Sbjct: 8 LKSIMAHKMRSLLTMLGIIIGVAAVVIIVAMGTGVAKSIEKSLAGDQNNVQVY-----FT 62
Query: 768 SVKSSEPFFQPESTLLIDQFLSQYQPEIEDYAWESSSFSIMTKQYQQSQITNIGHIYS-- 825
+ SS F P T ++ + + +P++ D + Y S I+NI + S
Sbjct: 63 AFSSSGTAFGPFGTASTEEPILEEEPDLTDSTLKGLLEIDGVSNYYSS-ISNIAEVRSGN 121
Query: 826 ---DGTNMYAISPNLFATTLPGFLKASSIAPDPDYSLNDIQYLSEQIYSFTSGQKIIIGS 882
+ + +S N FA +K I ++ ND S I T+ + + GS
Sbjct: 122 KKAENVTITGVSQNFFA------VKEYEILAGRQFTANDYSRFSRMIMLDTALAEKLFGS 175
Query: 883 LYTDVIGASIDQSFLLQLNIKSGEASSVNSTRHLV----KPSAMLDSAXXXXXXXXXXVT 938
+ S++Q+ SVNS +LV K + +T
Sbjct: 176 IEN-----SLNQTI------------SVNSNAYLVIGVYKDPKAGTAIYGMNSGGNAVMT 218
Query: 939 NQDSIVSFPTYLSYASSIFSSVREIPMNQVILKLNTDDKDAVESIKNRLNSFLIGNLRED 998
N ++ T + S IF V ++ + K D +K
Sbjct: 219 NTQ--LAAETGMKENSQIFVHVEDVTRATEVGKAAADYLTKATGLKEAR----------- 265
Query: 999 FDMLDYYEKIKPFATASVIIQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCAL 1058
+++ D ++ F + + F +++ + +M+ + ++ E+T+EIG+ AL
Sbjct: 266 YEIYDMSAMLEEFKSQMSGVTLFIGAVAGISLLVGGIGVMNIMLVSVTERTREIGLRKAL 325
Query: 1059 GIPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVGFTMILQRQLFTMLPIPMTLPWQLIII 1118
G + ++ ++ EA VL +G+ I T+ F + + + L + +++P L +
Sbjct: 326 GATRGNILIQFLIEAMVLTTLGGAIGLAIAQTIVFLLNVSKALGERIAAEISIPVVLGSL 385
Query: 1119 VF 1120
F
Sbjct: 386 AF 387
>gi|29607203|dbj|BAC71262.1| putative ABC transporter integral
membrane protein [Streptomyces avermitilis MA-4680]
ref|NP_824727.1| putative ABC transporter integral membrane protein [Streptomyces
avermitilis MA-4680]
Length = 855
Score = 58.2 bits (139), Expect = 1e-06
Identities = 43/175 (24%), Positives = 90/175 (50%), Gaps = 10/175 (5%)
Query: 962 EIPMNQVIL--KLNTDDKDAVESIKNRLNSFLIGNLREDFDMLDYYEKIKPFATASVIIQ 1019
+IP NQ++ +K A ++K + + +R D DY +++K + +
Sbjct: 673 KIPPNQIMFGEAKKGQEKQAYAALKKAMEPYPQYQVR---DQTDYKQELKDQVGQLLNMV 729
Query: 1020 YFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMA 1079
Y LA+ ++ +++++ +++E+T+EIG++ A+G+ + + R+ E+ V+ +
Sbjct: 730 YGL---LALAIIVAVLGVINTLALSVVERTREIGLMRAIGLSRRQLRRMIRLESVVIALF 786
Query: 1080 SSMLGMFIGSTVGFTMILQRQLFTMLPIPMTLPWQLIIIVFICSMFFSFFSAFGP 1134
++LG+ +G +G+ Q+ L + +PW II VFI S F F+A P
Sbjct: 787 GALLGLGLG--MGWGTTAQKLLALEGLNVLEIPWPTIIGVFIGSAFVGLFAALIP 839
Score = 39.3 bits (90), Expect = 0.71
Identities = 25/123 (20%), Positives = 59/123 (47%), Gaps = 2/123 (1%)
Query: 1017 IIQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVL 1076
+I+Y +A + F ++++ + ++T+EIG++ A+G + + R + EA +L
Sbjct: 265 VIKYAMLGFAGIAFLVGIFLIINTFSMLVAQRTREIGLMRAIGSSRGQVNRSVLVEALLL 324
Query: 1077 VMASSMLGMF--IGSTVGFTMILQRQLFTMLPIPMTLPWQLIIIVFICSMFFSFFSAFGP 1134
+ S+LG+ +G VG ++ + +T+ + + + + SA+ P
Sbjct: 325 GVVGSLLGVAAGVGIAVGLMKVMSSMGMDLSTRDLTVKATTPVAGLLLGIVVTVLSAYLP 384
Query: 1135 IRK 1137
R+
Sbjct: 385 ARR 387
>gi|45358197|ref|NP_987754.1| hypothetical protein MMP0634
[Methanococcus maripaludis S2]
emb|CAF30190.1| conserved hypothetical protein [Methanococcus maripaludis S2]
Length = 397
Score = 56.6 bits (135), Expect = 4e-06
Identities = 57/267 (21%), Positives = 108/267 (40%), Gaps = 17/267 (6%)
Query: 870 YSFTSGQKIIIGSLYTDVIGASIDQSFLLQLNIKSGEASSVNSTRHLVKPSAMLDSAXXX 929
Y G+ + YT VIG S+ I G+ +N ++ K +L+
Sbjct: 134 YELEKGRWMKDSDKYTCVIGYSLAHD-TFDREIDIGDKIEINDKKY--KVVGILEQ---- 186
Query: 930 XXXXXXXVTNQDSIVSFPTYLSYASSIFSSVREIPMNQVILKLNTDDKDAVESIKNRLNS 989
+ N D S AS +F E M V +K D E I++ L
Sbjct: 187 -------IGNPDDDNSIVIPYEAASEVFDVDDEYNMFMVKIKDGEDVTKVSEDIEDELED 239
Query: 990 FLIGNLREDFDMLDYYEKIKPFATASVIIQYFFSFTTVLAMTISFFSLMSSVYSNILEQT 1049
E+F +L + + ++ ++ F +++ + + ++++ +ILE+
Sbjct: 240 ---SRGDENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNTMHMSILERR 296
Query: 1050 KEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVGFTMILQRQLFTMLPIPM 1109
K+IG+L ALG + ++ I+V EA L + ++G +G + + + I
Sbjct: 297 KDIGILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIAKAIEYVAAISGYGLIRA 356
Query: 1110 TLPWQLIIIVFICSMFFSFFSAFGPIR 1136
+ W+LI+ V + S S + P R
Sbjct: 357 WISWELIVGVLVFSFVVGILSGYFPAR 383
>gi|48844871|ref|ZP_00299165.1| COG0577: ABC-type antimicrobial
peptide transport system, permease component [Geobacter
metallireducens GS-15]
Length = 409
Score = 56.6 bits (135), Expect = 4e-06
Identities = 48/217 (22%), Positives = 97/217 (44%), Gaps = 15/217 (6%)
Query: 938 TNQDSIVSFPTYLSYASSIFSSVREIPMNQVILKLNTDDKDAVESIKNRLNSFL-----I 992
T+QD ++ P + +F S + P + + D ++ + + + L I
Sbjct: 200 TDQDDVIFVPLRTAQRK-LFGS--QFPNTVGAMMIQAKSADVLKKAEEEVTALLDQRHRI 256
Query: 993 GNLRE-DFDMLDYYEKIKPFATASVIIQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKE 1051
G RE DF + + E + +S ++ +++ + +M+ + ++ E+T+E
Sbjct: 257 GPSRERDFTVRNLSEILAVSEQSSKVMSILLGAVASISLVVGGIGIMNIMLVSVTERTRE 316
Query: 1052 IGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVGFTMILQRQLFTMLPIPMTL 1111
IG+ A+G + ++ ++ EA +L A ++GM +G V M + + ++ P +
Sbjct: 317 IGIRMAIGAKQRDILLQFLTEAVLLTTAGGIIGMGLG--VAGAMAVSK----IMQWPTLI 370
Query: 1112 PWQLIIIVFICSMFFSFFSAFGPIRKVLNQPVVSIMR 1148
Q III F+ S F F P RK N + +R
Sbjct: 371 STQAIIIAFLFSAGVGVFFGFYPARKAANLNPIEALR 407
>gi|48841198|ref|ZP_00298124.1| COG0577: ABC-type antimicrobial
peptide transport system, permease component
[Methanosarcina barkeri str. fusaro]
Length = 403
Score = 56.6 bits (135), Expect = 4e-06
Identities = 34/128 (26%), Positives = 65/128 (50%), Gaps = 6/128 (4%)
Query: 1021 FFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMAS 1080
F + ++++ + +M+ + ++ E+T+EIGVL +LG ++ +++ E+ +L
Sbjct: 280 FLTAVALISLLVGSIGIMNIMLVSVTERTREIGVLKSLGFTGFDILFLFMIESILL---- 335
Query: 1081 SMLGMFIGSTVGFTMILQRQLFTMLPIPMTLPWQLIIIVFICSMFFSFFSAFGPIRKVLN 1140
+ G +GSTVG + T+L +P+ P+ LI F ++F F S P RK
Sbjct: 336 GVFGGLLGSTVGIAGAYSVE--TLLKLPVVFPFSLIAAGFFVAVFVGFVSGVYPARKAAK 393
Query: 1141 QPVVSIMR 1148
V +R
Sbjct: 394 MKPVDSLR 401
>gi|37520063|ref|NP_923440.1| hypothetical protein gll0494
[Gloeobacter violaceus PCC 7421]
dbj|BAC88435.1| gll0494 [Gloeobacter violaceus PCC 7421]
Length = 375
Score = 56.2 bits (134), Expect = 6e-06
Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 24/181 (13%)
Query: 966 NQVILKLNTDDKDAVESIKNRLNSFLIGNLREDFDMLDYYEKIKPFATASVIIQYFFSFT 1025
N + L+ N DKD FLIGN++E D+ F ++ + T
Sbjct: 216 NLLRLRHNVTDKD----------DFLIGNIQETLDL---------FNNIALGVTVVLGLT 256
Query: 1026 TVLAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGM 1085
+++ +S +M+ + ++ E+T+EIG+ ALG + ++ +V EA +L S+LG
Sbjct: 257 AAISLVVSGIGIMNIMLVSVTERTREIGLRKALGASEEVILAQFVTEAVLL----SVLGG 312
Query: 1086 FIGSTVGFTMILQRQLFTMLPIPMTLPWQLIIIVFICSMFFSFFSAFGPIRKVLNQPVVS 1145
+G G + F+ P PW +++ + + FF F R P+V+
Sbjct: 313 LLGMAWGLAAAVAVGQFSPFK-PEITPWSVVLALGVSVATGLFFGVFPARRAARLDPIVA 371
Query: 1146 I 1146
+
Sbjct: 372 L 372
>gi|48839337|ref|ZP_00296270.1| COG0577: ABC-type antimicrobial
peptide transport system, permease component
[Methanosarcina barkeri str. fusaro]
Length = 480
Score = 55.8 bits (133), Expect = 7e-06
Identities = 38/198 (19%), Positives = 94/198 (47%), Gaps = 7/198 (3%)
Query: 952 YASSIFSSVREIPMNQVILKLNTDDKDAVESIKNRLN-SFLIGNLREDFDMLDYYEKIKP 1010
Y++ ++S++ +V LK + D + A+E I+ ++ S + +DF + E I+
Sbjct: 287 YSADVYSTI------EVKLKKDADYEAAIEEIERKMRLSRRVTEDTQDFYVNSQKEVIES 340
Query: 1011 FATASVIIQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYV 1070
T + F +F +++ + + +++++++LE+TKEIG++ A+G ++ I++
Sbjct: 341 TRTMINGLTAFLAFIAGISLLVGSTGIANTMFTSVLEKTKEIGIMKAIGAKNQDIMLIFL 400
Query: 1071 YEAFVLVMASSMLGMFIGSTVGFTMILQRQLFTMLPIPMTLPWQLIIIVFICSMFFSFFS 1130
+ ++ + ++G+ IG+ ++ L P L ++ I + S+ +
Sbjct: 401 CNSAMISLVGGIIGILIGTVAVQAVLFFISLKMNAPFEFALSFKATFISTLVSIVVGLIA 460
Query: 1131 AFGPIRKVLNQPVVSIMR 1148
P + V +R
Sbjct: 461 GLVPAKNASELKPVDALR 478
>gi|49474194|ref|YP_032236.1| Lipoprotein releasing system
transmembrane protein lolC [Bartonella quintana str.
Toulouse]
emb|CAF26073.1| Lipoprotein releasing system transmembrane protein lolC [Bartonella
quintana str. Toulouse]
Length = 422
Score = 55.5 bits (132), Expect = 1e-05
Identities = 41/193 (21%), Positives = 90/193 (46%), Gaps = 18/193 (9%)
Query: 970 LKLNTDDKDAVESIKNRLNSFLIGNLREDFDMLDYYEKIKPFATASVIIQYFFSFTTVLA 1029
L+L +D DAV+ IK + + + ++D+ + + F +A I + F L
Sbjct: 232 LELFLNDPDAVDQIKPIVEKAI----DQQVYLIDWRMRNQAFFSALQIERNVMFFILSLI 287
Query: 1030 MTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFIG- 1088
+ ++ +++S + + +++ +I +L +G KS ++RI++ ++ + ++LG+ G
Sbjct: 288 VLVAALNIVSGLIMLVKDKSHDIAILRTMGAQKSTILRIFIVTGMMIGLVGTLLGLIFGV 347
Query: 1089 -STVGFTMI------------LQRQLFTMLPIPMTLPWQLIIIVFICSMFFSFFSAFGPI 1135
+TV I QL+ + +P L W+ ++V ++F SF +A P
Sbjct: 348 IATVNINHIQDFVSWLFNVDVFNPQLYFLTKLPAQLDWRQTVMVAGMALFLSFLAALIPA 407
Query: 1136 RKVLNQPVVSIMR 1148
+ V +R
Sbjct: 408 WRAAKLDPVQALR 420
>gi|15903868|ref|NP_359418.1| hypothetical protein spr1826
[Streptococcus pneumoniae R6]
gb|AAL00629.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
pir||H98099 conserved hypothetical protein spr1826 [imported] - Streptococcus
pneumoniae (strain R6)
Length = 326
Score = 54.7 bits (130), Expect = 2e-05
Identities = 62/341 (18%), Positives = 135/341 (39%), Gaps = 35/341 (10%)
Query: 819 NIGHIYSDGTNMYAISPNLFATTLPGFLKASSIAPDPDYSLNDIQYLSEQIYSFTSGQKI 878
N+ +I DG M + T+P + + S+ D S+++ K+
Sbjct: 8 NMSNITIDGQEMD------LSQTMPSYAQVVSLYDDTSISVSN-----------NETDKV 50
Query: 879 IIGSLYTDVI--GASIDQSFLLQLNIKSGEASSVNS------TRHLVKPSAMLDSAXXXX 930
+ GSLYTD G +I S L N ++G+ + N + +V+ +A
Sbjct: 51 LAGSLYTDTNEQGLTIPSSLLKNWNEQTGKNLTANDLIGKSVSASIVESAAEASKIAQFQ 110
Query: 931 XXXXXXVTNQDSIVSFPTYLSYASSIFSSVREIPMNQVI--LKLNTDDKDAVESIKNRLN 988
+ ++D + +++ + + + ++E + + L D + + L
Sbjct: 111 TKIVRVINDEDDMEDSNSFM-LSHQMETILKEAGFTKAVSYFILELKDPSQTKVVTEELQ 169
Query: 989 SFLIGNLREDFDMLDYYEKIKPFATASVIIQYFFSFTTVLAMTISFFSLMSSVYSNILEQ 1048
+ + +L + T +IQ + A+ ++ + +Y NI+++
Sbjct: 170 K------NKKYTVLSQQRVLDIVITFIRVIQGLLIVLSSQAIVVAAVMIGIIIYINIMQR 223
Query: 1049 TKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVG-FTMILQRQLFTMLPI 1107
+KEIGV+ A+G + I++YEA +V + +L + VG + + +
Sbjct: 224 SKEIGVMKAVGYQNRGVKGIFIYEAIWIVGIALLLAFLVAQGVGSLANAIVSHFYPSITK 283
Query: 1108 PMTLPWQLIIIVFICSMFFSFFSAFGPIRKVLNQPVVSIMR 1148
L ++ + ++ + SA+ P RK+ V +R
Sbjct: 284 VFELNLLSVLGTLVFALLLGYVSAYFPARKISKMDPVESLR 324
>gi|58338181|ref|YP_194766.1| ABC transporter ATP binding protein
[Lactobacillus acidophilus NCFM]
gb|AAV43735.1| ABC transporter ATP binding protein [Lactobacillus acidophilus NCFM]
Length = 779
Score = 54.7 bits (130), Expect = 2e-05
Identities = 55/203 (27%), Positives = 84/203 (41%), Gaps = 35/203 (17%)
Query: 963 IPMNQVILKLNTDDKDAVESIKNRLNSFLIGNLREDFDMLDYYEKIKPFATASVIIQYFF 1022
IP +I N DDKD V D LD + K K A V
Sbjct: 593 IPTGIMIYPNNFDDKDKV------------------LDYLDNWNKGKKKADKIVYTDMSS 634
Query: 1023 SFTTV----------LAMTISFFSLMSSV-------YSNILEQTKEIGVLCALGIPKSWM 1065
+ TT+ + +T + SL++S+ Y+++LE+TKEIGVL ALG K +
Sbjct: 635 AVTTMTGGLLNGITTILVTFAAISLITSMIMIGILTYTSVLERTKEIGVLKALGARKKDI 694
Query: 1066 IRIYVYEAFVLVMASSMLGMFIGSTVGFTMILQRQLFTMLPIPMTLPWQLIIIVFICSMF 1125
R++ E F+L + S +LG+FI + F + T L L + +I+ I S
Sbjct: 695 TRVFDAETFILGVFSGVLGIFIAYLLTFPINSVIYNLTDLANVAQLDPKAALILIIISTV 754
Query: 1126 FSFFSAFGPIRKVLNQPVVSIMR 1148
+ P R + +R
Sbjct: 755 LTLLGGHIPARMAAKKDAAIALR 777
>gi|23475614|ref|ZP_00130898.1| COG0577: ABC-type antimicrobial
peptide transport system, permease component
[Desulfovibrio desulfuricans G20]
Length = 454
Score = 54.7 bits (130), Expect = 2e-05
Identities = 44/155 (28%), Positives = 76/155 (48%), Gaps = 12/155 (7%)
Query: 970 LKLNTDDKDAVESIKNRLNSFL--IGNLR----EDFDMLDYYEKIKPFATASVIIQYFFS 1023
L++ + +A++ K L S L + NLR +DF ++ E +K A + F
Sbjct: 273 LRVKFTNAEAMDEHKEGLKSLLRHLHNLRPGDPDDFSIITADEVMKFIAMLQGGLVVFLG 332
Query: 1024 FTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSML 1083
T AM + F L + +Y +I E+ EIG+ A+G S ++ ++ E+ L + S+L
Sbjct: 333 ITAASAMVVGGFVLANLLYLSIAERQMEIGLRKAMGARNSAIVLQFLIESVTLTVIGSLL 392
Query: 1084 GMFIGSTVGFTMILQRQLFTMLPIPMTLPWQLIII 1118
G+ IG ++L R L I + L W++ II
Sbjct: 393 GLCIG------IVLGRILSGFDLIELELSWKVFII 421
>gi|10241793|emb|CAC09551.1| putative ABC transport system integral
membrane protein [Streptomyces coelicolor A3(2)]
ref|NP_627328.1| putative ABC transport system integral membrane protein [Streptomyces
coelicolor A3(2)]
Length = 854
Score = 54.3 bits (129), Expect = 2e-05
Identities = 35/135 (25%), Positives = 73/135 (53%), Gaps = 5/135 (3%)
Query: 1000 DMLDYYEKIKPFATASVIIQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALG 1059
D DY +++K + + Y LA+ ++ +++++ +++E+T+EIG++ A+G
Sbjct: 709 DQTDYKQELKDQIGQLLNMVYGL---LALAIIVAVLGVVNTLALSVVERTREIGLMRAIG 765
Query: 1060 IPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVGFTMILQRQLFTMLPIPMTLPWQLIIIV 1119
+ + + R+ E+ V+ + ++LG+ +G +G+ Q+ L + +PW II V
Sbjct: 766 LSRRQLRRMIRMESVVIALFGALLGLGLG--MGWGATAQKLLALEGLNVLDIPWPTIIGV 823
Query: 1120 FICSMFFSFFSAFGP 1134
FI S F F+A P
Sbjct: 824 FIGSAFVGLFAALVP 838
>gi|53723341|ref|YP_112326.1| putative permease [Burkholderia
pseudomallei K96243]
emb|CAH39810.1| putative permease [Burkholderia pseudomallei K96243]
Length = 475
Score = 53.5 bits (127), Expect = 4e-05
Identities = 37/160 (23%), Positives = 74/160 (46%), Gaps = 8/160 (5%)
Query: 997 EDFDMLDYYEKIKPFATASVIIQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLC 1056
+ D+LD+ + + + F F VL I F + +++ + ILE+T EIG L
Sbjct: 314 QPLDVLDFAALNPFYDQTNRMFSMIFGFVFVLIGAIVLFVVSNTMSTAILERTVEIGTLR 373
Query: 1057 ALGIPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVGFTMILQRQLFT--------MLPIP 1108
++G+ + + ++V E +L + + +G+ + + F + +T L +
Sbjct: 374 SMGVRRGGIQALFVCEGALLGVVGASIGVLVALALAFVVNHSGLAWTPPARIDSVALTVR 433
Query: 1109 MTLPWQLIIIVFICSMFFSFFSAFGPIRKVLNQPVVSIMR 1148
+ W+LI + F+ F + FSA+ P R +V +R
Sbjct: 434 VWGEWRLIALTFVGLAFVAGFSAWLPARHAARLSIVDALR 473
>gi|21227735|ref|NP_633657.1| ABC transporter, ATP-binding protein
[Methanosarcina mazei Go1]
gb|AAM31329.1| ABC transporter, ATP-binding protein [Methanosarcina mazei Goe1]
Length = 403
Score = 53.5 bits (127), Expect = 4e-05
Identities = 34/128 (26%), Positives = 63/128 (48%), Gaps = 6/128 (4%)
Query: 1021 FFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMAS 1080
F + ++++ + +M+ + ++ E+T+EIGVL +LG S ++ +++ E+ +L
Sbjct: 280 FLTAVALISLLVGSIGIMNIMLVSVTERTREIGVLKSLGFTGSDILFLFMIESILL---- 335
Query: 1081 SMLGMFIGSTVGFTMILQRQLFTMLPIPMTLPWQLIIIVFICSMFFSFFSAFGPIRKVLN 1140
+ G IG VG T + F L +P+ P LI+ F ++ F S P RK
Sbjct: 336 GVFGGIIGGIVGITGAYGVESF--LSLPVVFPLSLIVAGFFVAVAVGFISGVYPARKAAK 393
Query: 1141 QPVVSIMR 1148
V +R
Sbjct: 394 MKPVDSLR 401
>gi|49475641|ref|YP_033682.1| Lipoprotein releasing system
transmembrane protein lolC [Bartonella henselae str.
Houston-1]
emb|CAF27676.1| Lipoprotein releasing system transmembrane protein lolC [Bartonella
henselae str. Houston-1]
Length = 422
Score = 53.1 bits (126), Expect = 5e-05
Identities = 37/193 (19%), Positives = 89/193 (45%), Gaps = 18/193 (9%)
Query: 970 LKLNTDDKDAVESIKNRLNSFLIGNLREDFDMLDYYEKIKPFATASVIIQYFFSFTTVLA 1029
L+L +D D+V+ IK L + + ++D+ + + F +A I + F L
Sbjct: 232 LELFLNDPDSVDRIKPILEKLI----DQQVYLIDWRTRNQAFFSALQIERNVMFFILSLI 287
Query: 1030 MTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFIG- 1088
+ ++ +++S + + +++ +I +L +G +S ++RI++ ++ + ++LG+ G
Sbjct: 288 VLVAALNIISGLIMLVKDKSHDIAILRTMGAQQSAILRIFIVTGMMIGLIGTLLGLIFGV 347
Query: 1089 -------------STVGFTMILQRQLFTMLPIPMTLPWQLIIIVFICSMFFSFFSAFGPI 1135
S + + QL+ + +P + W ++V + ++F SF +A P
Sbjct: 348 IATANINHIQDFISWLFNVDVFNPQLYFLTKLPAKIEWGQTVMVAVMALFLSFLAALIPA 407
Query: 1136 RKVLNQPVVSIMR 1148
+ V +R
Sbjct: 408 WRAAKLDPVQALR 420
>gi|20091110|ref|NP_617185.1| ABC transporter, permease protein
[Methanosarcina acetivorans C2A]
gb|AAM05665.1| ABC transporter, permease protein [Methanosarcina acetivorans str.
C2A]
Length = 455
Score = 52.8 bits (125), Expect = 6e-05
Identities = 34/183 (18%), Positives = 86/183 (46%), Gaps = 1/183 (0%)
Query: 967 QVILKLNTDDKDAVESIKNRLN-SFLIGNLREDFDMLDYYEKIKPFATASVIIQYFFSFT 1025
++ L D A+E I+ +L S ++ +DF + E I+ + F +F
Sbjct: 271 EIKLYSGADYDSALEEIERKLRLSRMVTEDTQDFYVSSSKEAIESTQKLINGLTSFLAFI 330
Query: 1026 TVLAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGM 1085
+++ + + +++++++LE+TKEIG++ A+G S ++ I++ A ++ + ++G+
Sbjct: 331 AGISLLVGSTGIANTMFTSVLEKTKEIGIMKAIGAKNSDIMLIFLCNAAMISLVGGIIGI 390
Query: 1086 FIGSTVGFTMILQRQLFTMLPIPMTLPWQLIIIVFICSMFFSFFSAFGPIRKVLNQPVVS 1145
+G+ ++L + +P L + ++ + S+ + P + V
Sbjct: 391 LLGTAAVQLVLLLISVKMNVPFEFALSLKGTVVATLVSIIVGLIAGLVPAKNAAELKPVD 450
Query: 1146 IMR 1148
+R
Sbjct: 451 ALR 453
>gi|57168778|ref|ZP_00367909.1| permease protein, putative
[Campylobacter coli RM2228]
gb|EAL56508.1| permease protein, putative [Campylobacter coli RM2228]
Length = 372
Score = 52.8 bits (125), Expect = 6e-05
Identities = 34/124 (27%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 1018 IQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLV 1077
+ + ++ +T S + +SS+ I + KEI + ALG KS + +++ E F++
Sbjct: 248 LMFLIILVVLIIVTTSVNTTLSSI---IFSRKKEIALRLALGAKKSEIFKLFACEYFIIS 304
Query: 1078 MASSMLGMFIGSTVGFTMILQRQLFTMLPIPMTLPWQL--IIIVFICSMFFSFFSAFGPI 1135
+ +S++G F G I +F L ++ ++ I + I S+FF+F +AF PI
Sbjct: 305 LFASIIGAFCG-------IFLANIFGYLIFNASIDFRFKAIFMALIVSLFFAFLAAFFPI 357
Query: 1136 RKVL 1139
+K L
Sbjct: 358 KKAL 361
>gi|15901836|ref|NP_346440.1| hypothetical protein SP2013
[Streptococcus pneumoniae TIGR4]
gb|AAK76080.1| conserved hypothetical protein [Streptococcus pneumoniae TIGR4]
pir||G95235 conserved hypothetical protein SP2013 [imported] - Streptococcus
pneumoniae (strain TIGR4)
Length = 326
Score = 52.8 bits (125), Expect = 6e-05
Identities = 63/330 (19%), Positives = 127/330 (38%), Gaps = 33/330 (10%)
Query: 819 NIGHIYSDGTNMYAISPNLFATTLPGFLKASSIAPDPDYSLNDIQYLSEQIYSFTSGQKI 878
N+ +I DG M + T+P + + S+ D S+++ K+
Sbjct: 8 NMSNITIDGQEMD------LSQTMPSYAQVVSLYDDTSISVSN-----------NETDKV 50
Query: 879 IIGSLYTDVI--GASIDQSFLLQLNIKSGEASSVN-----STRHLVKPSAMLDSAXXXXX 931
+ GSLYTD G +I S L N ++G+ + N S + SA S
Sbjct: 51 LAGSLYTDTNEQGLTIPSSLLKNWNEQTGKNLTANDLIGKSVSASIVESAAETSKIAQFQ 110
Query: 932 XXXXXVTNQDSIVSFPTYLSYASSIFSSVREIPMNQVI--LKLNTDDKDAVESIKNRLNS 989
V N + + + + + ++E + + L D + + L
Sbjct: 111 TKIVRVINDEDDMEDSNSFMLSHQMETILKEAGFTKAVSYFILELKDPSQTKVVTEELQK 170
Query: 990 FLIGNLREDFDMLDYYEKIKPFATASVIIQYFFSFTTVLAMTISFFSLMSSVYSNILEQT 1049
+ + +L + T +IQ + A+ ++ + +Y NI++++
Sbjct: 171 ------NKKYTVLSQQRVLDIVITFIRVIQGLLIVLSSQAIVVAAVMIGIIIYINIMQRS 224
Query: 1050 KEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVG-FTMILQRQLFTMLPIP 1108
KEIGV+ A+G + I++YEA +V + +L + VG + + +
Sbjct: 225 KEIGVMKAVGYQNRDVKGIFIYEAIWIVGIALLLAFLVAQGVGSLANAIVSHFYPSITKV 284
Query: 1109 MTLPWQLIIIVFICSMFFSFFSAFGPIRKV 1138
L ++ + ++ + SA+ P RK+
Sbjct: 285 FKLNLLSVLGTLVFALLLGYVSAYFPARKI 314
>gi|53715894|ref|YP_106592.1| ABC transporter, permease protein,
putative [Burkholderia mallei ATCC 23344]
gb|AAU45434.1| ABC transporter, permease protein, putative [Burkholderia mallei ATCC
23344]
Length = 475
Score = 52.8 bits (125), Expect = 6e-05
Identities = 37/160 (23%), Positives = 73/160 (45%), Gaps = 8/160 (5%)
Query: 997 EDFDMLDYYEKIKPFATASVIIQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLC 1056
+ D+LD+ + + + F F VL I F + +++ + ILE+T EIG L
Sbjct: 314 QPLDVLDFAALNPFYDQTNRMFSMIFGFVFVLIGAIVLFVVSNTMSTAILERTVEIGTLR 373
Query: 1057 ALGIPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVGFTMILQRQLFT--------MLPIP 1108
++G+ + + ++V E +L + + +G+ + F + +T L +
Sbjct: 374 SMGVRRGGIQALFVCEGALLGVVGASIGVLVALAFAFVVNHSGLAWTPPARIDSVALTVR 433
Query: 1109 MTLPWQLIIIVFICSMFFSFFSAFGPIRKVLNQPVVSIMR 1148
+ W+LI + F+ F + FSA+ P R +V +R
Sbjct: 434 VWGEWRLIALTFVGLAFVAGFSAWLPARHAARLSIVDALR 473
>gi|15897947|ref|NP_342552.1| hypothetical protein SSO1080 [Sulfolobus
solfataricus P2]
gb|AAK41342.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
pir||G90260 conserved hypothetical protein [imported] - Sulfolobus solfataricus
Length = 398
Score = 52.4 bits (124), Expect = 8e-05
Identities = 31/110 (28%), Positives = 61/110 (55%), Gaps = 9/110 (8%)
Query: 1032 ISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFIGSTV 1091
+SF + +++++ ++E+TKEIG+L ALG + ++ +++ EA V+ S+ G+ +GS V
Sbjct: 275 VSFMGVTTTMFTTVVERTKEIGILRALGFTRFDVLTMFLVEASVMGFIGSITGLALGSVV 334
Query: 1092 GFTMILQRQLFTM-------LPIPMTLPWQLIIIVFICSMFFSFFSAFGP 1134
+IL ++ F + L + +++V I S S +A GP
Sbjct: 335 --ALILTQEHFGLGFSFLKGLSVSPVYSPTFMLLVLIFSTILSVIAALGP 382
>gi|21325766|dbj|BAC00387.1| ABC-type transporter, permease components
[Corynebacterium glutamicum ATCC 13032]
ref|NP_602189.1| ABC-type transporter, permease component [Corynebacterium glutamicum
ATCC 13032]
emb|CAF18933.1| ABC-type transport system, involved in lipoprotein release, permease
component [Corynebacterium glutamicum ATCC 13032]
Length = 421
Score = 52.4 bits (124), Expect = 8e-05
Identities = 38/174 (21%), Positives = 80/174 (45%), Gaps = 7/174 (4%)
Query: 976 DKDAVE-SIKNRLNSFLIGNLREDFDMLDYYEKIKPFATASVIIQYFFSFTTVLAMTISF 1034
D+D+++ S++ ++ N MLD+ ++I+ F T + S +++ +
Sbjct: 252 DQDSLKGSLQTYFDALYANNDSHHVAMLDFRKQIEEFNTILGAMSLGISAIGGISLLVGG 311
Query: 1035 FSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVGFT 1094
+M+ + ++ E+T+EIGV ALG + + +V EA ++ +LG+ +G +G
Sbjct: 312 IGVMNIMLVSVTERTREIGVRKALGARRRDIRLQFVVEAMIICFIGGILGVLLGGILG-- 369
Query: 1095 MILQRQLFTMLPIPMTLPWQLIIIVFICSMFFSFFSAFGPIRKVLNQPVVSIMR 1148
++ + +P P I+I + SM F + P K + +R
Sbjct: 370 -LIMSSAIGYISLP---PLSGIVIALVFSMAIGLFFGYYPANKAAKLDPIDALR 419
>gi|23468969|ref|ZP_00124304.1| COG0577: ABC-type antimicrobial
peptide transport system, permease component [Pseudomonas
syringae pv. syringae B728a]
Length = 657
Score = 52.4 bits (124), Expect = 8e-05
Identities = 37/171 (21%), Positives = 79/171 (45%), Gaps = 10/171 (5%)
Query: 977 KDAVESIKNRLNSFLIGNLREDFDMLDYYEKIKPFATASVIIQYFFSFTTVLAMTISFFS 1036
K A +SI+N L G ++D+++ + I+ A + +++ +
Sbjct: 493 KQAEQSIRNLLQQLHHG--KQDYELTNNAAMIQAEARTQNTLSLMLGSIAAISLLVGGIG 550
Query: 1037 LMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVGFTMI 1096
+M+ + + E+T+EIG+ A G +S ++R ++ EA +L + + G+ + +G ++
Sbjct: 551 VMNIMLMTVRERTREIGIRMATGARQSDILRQFLTEAVMLSVVGGLAGIVLALGMGAALL 610
Query: 1097 LQRQLFTMLPIPMTLPWQLIIIVFICSMFFSFFSAFGPIRKVLN-QPVVSI 1146
L + + + TLP + F C++ F P RK PV ++
Sbjct: 611 LSK-----VAVAFTLP--AVAGAFACALITGVIFGFMPARKAARLDPVAAL 654
>gi|48866288|ref|ZP_00320144.1| COG1136: ABC-type antimicrobial
peptide transport system, ATPase component [Oenococcus
oeni PSU-1]
Length = 664
Score = 52.0 bits (123), Expect = 1e-04
Identities = 38/180 (21%), Positives = 90/180 (49%), Gaps = 7/180 (3%)
Query: 970 LKLNTDDKDAVESIKNRLNSFLIGNLREDFDMLDYYEKIKPFATASVIIQYFFSFTTVLA 1029
+ +N + DA +++ ++N+ + F + + + ++ + S ++
Sbjct: 486 VSVNANSIDATKTVAKKINNIKTDG-KYTFGAITVGDVLNTVSSYVKLATNVLSAIAAIS 544
Query: 1030 MTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFIGS 1089
+ +S ++ S+Y ++ E+TKEIGVL ALG K + R++ E+ ++ + S++L + +
Sbjct: 545 LVVSALMIIVSMYMSVSERTKEIGVLRALGEGKKDISRLFTGESVLIGLFSAVLALALAF 604
Query: 1090 TVGFTMILQRQLFTMLPIPMTL--PWQLIIIVFICSMFFSFFSAFGPIRKVLN-QPVVSI 1146
+G I+ + L+ + M + P ++ F+ ++ SF +A P R+ P+ S+
Sbjct: 605 GIG--GIVNKLLYGLAKANMVVITPGN-VVFAFVIAIVISFLAALLPARRAAKLDPIESL 661
>gi|48845105|ref|ZP_00299393.1| COG0577: ABC-type antimicrobial
peptide transport system, permease component [Geobacter
metallireducens GS-15]
Length = 851
Score = 52.0 bits (123), Expect = 1e-04
Identities = 31/114 (27%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Query: 1025 TTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLG 1084
T LA+ ++F +++S+ ++ E+T+EIGVL ALG S ++R V EA V+ + + ++
Sbjct: 725 TVFLALVVAFLGIVTSLLISVAERTREIGVLKALGAIPSQIVRSVVAEALVISLVAVIVA 784
Query: 1085 MFIGST-VGFTMILQRQLFTMLPIPMTLPWQLIIIVFICSMFFSFFSAFGPIRK 1137
+ G+ F + +T +P P +++ + + F S +A+ P R+
Sbjct: 785 IPAGNLFASFMEGAVARFYTGWSMPHEYPLEILAQLLVALPFISTLAAWMPARQ 838
>gi|50120448|ref|YP_049615.1| putative permease [Erwinia carotovora
subsp. atroseptica SCRI1043]
emb|CAG74419.1| putative permease [Erwinia carotovora subsp. atroseptica SCRI1043]
Length = 429
Score = 52.0 bits (123), Expect = 1e-04
Identities = 35/130 (26%), Positives = 60/130 (45%), Gaps = 5/130 (3%)
Query: 1018 IQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLV 1077
IQ + T A+ S + S + S I+E+ KEIG++ ALG + W I + Y L
Sbjct: 302 IQLLLAVVTFAALVASAMGIASLMTSTIMERAKEIGLMKALG-ARQWQIMLLFYLEAAL- 359
Query: 1078 MASSMLGMFIGSTVGFTMILQRQLFTMLPIPMTLPWQLIIIVFICSMFFSFFSAFGPIRK 1137
S ++G G G+ + L + +P++ W +I V + SM + + P RK
Sbjct: 360 --SGLVGGIAGCVAGWGLAKAIGLM-LFGVPLSFAWIVIPCVLVISMLIAIIGTWFPARK 416
Query: 1138 VLNQPVVSIM 1147
+ V ++
Sbjct: 417 IAKLYPVEVL 426
>gi|57240580|ref|ZP_00368529.1| probable integral membrane protein
Cj1662 [Campylobacter lari RM2100]
gb|EAL55694.1| probable integral membrane protein Cj1662 [Campylobacter lari RM2100]
Length = 371
Score = 52.0 bits (123), Expect = 1e-04
Identities = 45/189 (23%), Positives = 93/189 (48%), Gaps = 28/189 (14%)
Query: 968 VILKLNTDDKDAVESIKNRLNSFLIGNLREDFDMLDYYEK--------IKPFATAS---- 1015
+I+ L + A + + N + L+G D++ LD K K A+ S
Sbjct: 183 LIISLKKAQELAAKEVINYAQAILLG----DYESLDQKAKGLSKANIEAKVIASVSISEG 238
Query: 1016 VIIQYFFSFTTVLAMTISFFSLMS---SVYSNILEQTKEIGVLCALGIPKSWMIRIYVYE 1072
V+++ + ++++TI S +S ++ + I + KEI + ALG +I+++ E
Sbjct: 239 VVLEKIKALMALISLTILLISSLSVNTTLSAVIFSRKKEIALHLALGAKHREVIKLFGAE 298
Query: 1073 AFVLVMASSMLGMFIGSTVGFTMILQRQLFTMLPIPMTLPWQLIIIVF--ICSMFFSFFS 1130
F+L +++S+LG F G + +F L ++ ++L+ + F + S+ F+FF+
Sbjct: 299 VFILSLSASLLGAFCGYFLA-------NIFGYLIFNASIDFRLLSVFFAVLISLVFAFFA 351
Query: 1131 AFGPIRKVL 1139
+ P++K L
Sbjct: 352 SILPLKKAL 360
>gi|53689376|ref|ZP_00063554.2| COG0577: ABC-type antimicrobial
peptide transport system, permease component [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
Length = 393
Score = 52.0 bits (123), Expect = 1e-04
Identities = 36/175 (20%), Positives = 74/175 (41%), Gaps = 6/175 (3%)
Query: 974 TDDKDAVESIKNRLNSFLIGNLREDFDMLDYYEKIKPFATASVIIQYFFSFTTVLAMTIS 1033
T+ A IK++LN + ++ D +K I YF +++ I+
Sbjct: 225 TNISKATTDIKDQLNKIGSQHASGSYEFFDTAAMLKGITAVIKGITYFIVAVASISLFIA 284
Query: 1034 FFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVGF 1093
+M+ +Y + E+T+EIG+ A+G + ++ ++ EA +L ++ M+G G V
Sbjct: 285 GIGVMNMMYIAVSERTQEIGIRMAVGASQKQILWQFLIEAVMLTLSGGMIGYLAGLGVAM 344
Query: 1094 TMILQRQLFTMLPIPMTLPWQLIIIVFICSMFFSFFSAFGPIRKVLNQPVVSIMR 1148
+ LP ++ ++ F S P + N+ ++ I+R
Sbjct: 345 ------GISAFLPFKASVSLSTFLLAFGTSTVVGLVFGILPAKTASNKNLIDILR 393
>gi|11496870|ref|NP_045651.1| hypothetical protein BBJ27 [Borrelia
burgdorferi B31]
gb|AAC66122.1| B. burgdorferi predicted coding region BBJ27 [Borrelia burgdorferi
B31]
pir||D70248 hypothetical protein BBJ27 - Lyme disease spirochete plasmid J/lp38
Length = 411
Score = 51.6 bits (122), Expect = 1e-04
Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 19/191 (9%)
Query: 967 QVILKLNTDDKDAVESIKNRLNSFLIGNLREDFDMLDYYEKIKPFATASVIIQYFFSFTT 1026
QV LK D +E+ K +L++F N FD D++E F + + + F F
Sbjct: 227 QVFLK----DSSTLETFKKKLDNFK-KNKGISFDYNDWFEINPYFKSVLGMTRTTFMFIL 281
Query: 1027 VLAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMF 1086
VL + F + + + +E+T+E+G L A+G+ K + Y F+ ++ S++ +
Sbjct: 282 VLISLLIFIAFFQIMTALSIERTRELGTLRAIGLTKLELF----YSLFLEIVIISVVNIV 337
Query: 1087 IGSTVGF--TMILQRQLFTMLPIPMTLPWQL--------IIIVFICSMFFSFFSAFGPIR 1136
+G + + + +Q Q + P + + + II V I + + FS+ P
Sbjct: 338 VGVILAYFAKLFIQFQKISFTPPGYSETYYINIFYYASDIIYVSIFMLILAIFSSILPFS 397
Query: 1137 KVLNQPVVSIM 1147
K + VV +M
Sbjct: 398 KASKKSVVEVM 408
>gi|23103026|ref|ZP_00089519.1| COG4591: ABC-type transport system,
involved in lipoprotein release, permease component
[Azotobacter vinelandii]
Length = 416
Score = 51.6 bits (122), Expect = 1e-04
Identities = 34/154 (22%), Positives = 75/154 (48%), Gaps = 12/154 (7%)
Query: 1000 DMLDYYEKIKPFATASVIIQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALG 1059
++ +Y K+K + F F ++ TI S++++V I+E+T+EIG L ALG
Sbjct: 266 ELSTFYTKVKN------MFDVIFLFAFLIVFTIVVMSVINTVGMAIMERTREIGTLRALG 319
Query: 1060 IPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVGFTMI------LQRQLFTMLPIPMTLPW 1113
+ + ++ ++ E+ +L + S++G+ + V ++ + Q+ +P+ + L
Sbjct: 320 VKRRGIVGLFALESMLLGLIGSLVGVLLTLAVWSSIATLEPTWIPPQITRRIPLEVYLVP 379
Query: 1114 QLIIIVFICSMFFSFFSAFGPIRKVLNQPVVSIM 1147
+ ++ + M S +A P RK +V +
Sbjct: 380 REMLWSLLALMVLSLLAASLPARKAARMEIVGAL 413
>gi|19704163|ref|NP_603725.1| ABC transporter permease protein
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gb|AAL95024.1| ABC transporter permease protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 408
Score = 51.2 bits (121), Expect = 2e-04
Identities = 32/144 (22%), Positives = 75/144 (51%), Gaps = 12/144 (8%)
Query: 977 KDAVESIKNRLNSFLIGNLREDFDMLDYYEKIKPFATASVIIQYFFSFTTVLAMTISFFS 1036
K+ +E KN N ++ + D + D K +T S+ F + +++ +
Sbjct: 250 KNILEFNKNAKNLYVTNAVSNDIESFD-----KILSTLSL----FVTLAASISLLVGGIG 300
Query: 1037 LMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVGF--- 1093
+M+ + ++E+TKEIG+ ALG +++ +++E+ +L + ++G+FIG G
Sbjct: 301 VMNIMLVTVVERTKEIGIRKALGAKNRDILKQFLFESIILTVFGGLVGIFIGILFGLLTG 360
Query: 1094 TMILQRQLFTMLPIPMTLPWQLII 1117
++ + +F+M+ I ++L +++
Sbjct: 361 VVVGIKPIFSMVSIIVSLSISVVV 384
>gi|48870960|ref|ZP_00323677.1| COG1136: ABC-type antimicrobial
peptide transport system, ATPase component [Pediococcus
pentosaceus ATCC 25745]
Length = 645
Score = 51.2 bits (121), Expect = 2e-04
Identities = 43/172 (25%), Positives = 87/172 (50%), Gaps = 10/172 (5%)
Query: 972 LNTDDKDAVESIKNRLNSF---LIGNLREDFDMLDYYEKIKPFATASVIIQYFFSFTTVL 1028
+N ++ V+S++N++ ++ + G R + + + T ++ Y + +
Sbjct: 465 VNVNNTQNVKSVQNKIKNYKHDVKGKERPQYTITGVGAILDSLNTYIMLAFYVLAGIAGI 524
Query: 1029 AMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFIG 1088
++ +S ++ +Y ++ E+TKEIG+L A+G + + ++V EAF L + SS+LG
Sbjct: 525 SLLVSAIMIIVVLYISVSERTKEIGILRAIGARRKDIRNLFVSEAFFLGLFSSILGSAFA 584
Query: 1089 --STVGFTMILQRQL-FTMLPIPMTLPWQLIIIVFICSMFFSFFSAFGPIRK 1137
+ G +I + + F ++ I P LI + I S+ S +AF P RK
Sbjct: 585 LLAQWGANVISMKHIDFAIIGI---APGYLIFGIAI-SIIISLLAAFTPSRK 632
>gi|21323171|dbj|BAB97799.1| ABC-type transport systems, involved in
lipoprotein release, permease components [Corynebacterium
glutamicum ATCC 13032]
emb|CAF19122.1| PUTATIVE ABC TRANSPORTER INTEGRAL MEMBRANE PROTEIN [Corynebacterium
glutamicum ATCC 13032]
Length = 862
Score = 51.2 bits (121), Expect = 2e-04
Identities = 27/110 (24%), Positives = 62/110 (55%), Gaps = 2/110 (1%)
Query: 1028 LAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFI 1087
LA+ I+ ++++++ +I E+T+EIG+L A G+ + + R+ E+ +L + ++ G+ +
Sbjct: 744 LAVIIAVLGIVNTLFLSISERTREIGILRATGVQRGQIRRMITLESVILSIHGAIHGLLL 803
Query: 1088 GSTVGFTMILQRQLFTMLPIPMTLPWQLIIIVFICSMFFSFFSAFGPIRK 1137
G+ +G+ ++ L T P+ PW I ++ I ++ +A P +
Sbjct: 804 GTFIGWAIV--SCLRTRGMAPVEFPWTQIGLMLISAIIIGGIAALIPANR 851
>gi|53685146|ref|ZP_00097994.2| COG1136: ABC-type antimicrobial
peptide transport system, ATPase component
[Desulfitobacterium hafniense DCB-2]
Length = 779
Score = 51.2 bits (121), Expect = 2e-04
Identities = 40/175 (22%), Positives = 73/175 (40%), Gaps = 2/175 (1%)
Query: 976 DKDAVESIKNRLNSFLIGNLREDFDMLDYYEKIKPFATASVI--IQYFFSFTTVLAMTIS 1033
D DA + + N + + +G ED T ++ I +++ +S
Sbjct: 603 DFDAKDEVINYIEQYNVGKAEEDVITFTDLAGTLSSLTKGIMDGITLVLIAFAAISLVVS 662
Query: 1034 FFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVGF 1093
+ Y+++LE+TKEIG+L ALG K + R++ E F+L + S +LG+ + + F
Sbjct: 663 MIMISIITYTSVLERTKEIGILKALGARKKDITRVFDAETFILGVFSGVLGVMVAWSCTF 722
Query: 1094 TMILQRQLFTMLPIPMTLPWQLIIIVFICSMFFSFFSAFGPIRKVLNQPVVSIMR 1148
+ T L L +++ I S + P R + V +R
Sbjct: 723 PINQAIHESTGLTNASHLRLDHAVLLVILSTVITVLGGHIPARLASQKDAVEALR 777
>gi|23465931|ref|NP_696534.1| large protein with N-terminal similarity
to ATP binding protein of ABC transporter
[Bifidobacterium longum NCC2705]
gb|AAN25170.1| large protein with N-terminal similarity to ATP binding protein of
ABC transporter [Bifidobacterium longum NCC2705]
Length = 948
Score = 51.2 bits (121), Expect = 2e-04
Identities = 49/216 (22%), Positives = 93/216 (42%), Gaps = 16/216 (7%)
Query: 941 DSIVSFPTYLSYASSIFSSVREIPMNQVILKLNTDDKDAVESIKNRLNSFLIGNLREDFD 1000
D VS TY ++ R+ P + I + +DKD + N+ + + ++
Sbjct: 739 DQYVSTGTYDDNLAAFGVVSRDAPSSINIYADSFEDKDHIADAITDYNNTV--SKKDKIT 796
Query: 1001 MLDYYEKIKPFATASV-IIQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALG 1059
DY + T V +I Y +++ +S + Y ++LE+TKEIG+L A+G
Sbjct: 797 YTDYVGLMMSSVTTIVNVISYVLIAFVSVSLIVSSIMIGIITYISVLERTKEIGILRAMG 856
Query: 1060 IPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVGFTMILQRQLFTML-------PIPMTLP 1112
K + +++ E ++ + S +LG VG T++L + +L + LP
Sbjct: 857 ASKHNVSQVFNAETGIIGLCSGLLG------VGLTVLLNIPINAVLHHFIGNADVNAALP 910
Query: 1113 WQLIIIVFICSMFFSFFSAFGPIRKVLNQPVVSIMR 1148
+++ I S+ + P RK Q + +R
Sbjct: 911 VTGGVVLVILSVVLTLIGGLIPSRKAAKQDPATALR 946
>gi|19551651|ref|NP_599653.1| ABC-type transport system permease
component [Corynebacterium glutamicum ATCC 13032]
Length = 856
Score = 51.2 bits (121), Expect = 2e-04
Identities = 27/110 (24%), Positives = 62/110 (55%), Gaps = 2/110 (1%)
Query: 1028 LAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFI 1087
LA+ I+ ++++++ +I E+T+EIG+L A G+ + + R+ E+ +L + ++ G+ +
Sbjct: 738 LAVIIAVLGIVNTLFLSISERTREIGILRATGVQRGQIRRMITLESVILSIHGAIHGLLL 797
Query: 1088 GSTVGFTMILQRQLFTMLPIPMTLPWQLIIIVFICSMFFSFFSAFGPIRK 1137
G+ +G+ ++ L T P+ PW I ++ I ++ +A P +
Sbjct: 798 GTFIGWAIV--SCLRTRGMAPVEFPWTQIGLMLISAIIIGGIAALIPANR 845
>gi|23003154|ref|ZP_00046822.1| COG1136: ABC-type antimicrobial
peptide transport system, ATPase component [Lactobacillus
gasseri]
Length = 779
Score = 50.8 bits (120), Expect = 2e-04
Identities = 31/98 (31%), Positives = 54/98 (54%), Gaps = 1/98 (1%)
Query: 1028 LAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFI 1087
+++ S + Y+++LE+TKEIGVL ALG K + R++ E F+L + S +LG+FI
Sbjct: 657 ISLVTSMIMIGILTYTSVLERTKEIGVLKALGARKRDITRVFDAETFILGLFSGILGIFI 716
Query: 1088 GSTVGFTM-ILQRQLFTMLPIPMTLPWQLIIIVFICSM 1124
F + + + M + P Q +I+V I ++
Sbjct: 717 AYLCTFPINAVLYAITNMSNVAQLDPMQALILVIISTI 754
>gi|21674173|ref|NP_662238.1| ABC transporter efflux protein
[Chlorobium tepidum TLS]
gb|AAM72580.1| ABC transporter efflux protein [Chlorobium tepidum TLS]
Length = 414
Score = 50.8 bits (120), Expect = 2e-04
Identities = 33/162 (20%), Positives = 76/162 (46%), Gaps = 7/162 (4%)
Query: 986 RLNSFLIGNLREDFDMLDYYEKIKPFATASVIIQYFFSFTTVLAMTISFFSLMSSVYSNI 1045
RL L + DF++ + F I+ + +A+ + +M+ + ++
Sbjct: 255 RLARGLTVKMPNDFEIRTNESLVDSFRDIQRIVSIGAFIISFMALLTAGVGIMNIMLVSV 314
Query: 1046 LEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVGFTMILQRQLFTML 1105
E+T+EIG+ ++G P+ +++ ++ EA +L + +LG+ G+ G + ++ L
Sbjct: 315 TERTREIGIRMSVGAPRRSILQQFLLEALLLSIGGGVLGIVAGAAAGNLVAVKFNL---- 370
Query: 1106 PIPMTLPWQLIII-VFICSMFFSFFSAFGPIRKVLNQPVVSI 1146
P+ PW +++ + +CS+ F F + PV ++
Sbjct: 371 --PVMFPWLWVVVSLTVCSVIGISFGLFPAWKASSLDPVTAL 410
>gi|46580780|ref|YP_011588.1| lipoprotein releasing system, permease
protein [Desulfovibrio vulgaris subsp. vulgaris str.
Hildenborough]
gb|AAS96848.1| lipoprotein releasing system, permease protein [Desulfovibrio
vulgaris subsp. vulgaris str. Hildenborough]
Length = 411
Score = 50.8 bits (120), Expect = 2e-04
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 10/129 (7%)
Query: 1028 LAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFI 1087
L + + FS+++++ ++E+T++I +L ++G +S + RI++ + ++ + LG +
Sbjct: 283 LIVLVGSFSIVTTLVMLVMEKTRDIAILMSMGATRSMVRRIFMLQGTIIGAIGTALGYVL 342
Query: 1088 GSTVGFTMILQRQLFTMLP--------IPMTLPWQLIIIVFICSMFFSFFSAFGPIRKVL 1139
G +V + LQR F LP +P+ L W + V +M F + P R+
Sbjct: 343 GLSVSWA--LQRYQFIKLPQGVYSIDHLPVLLQWSDLAAVGGAAMLLCFLATIYPARQAA 400
Query: 1140 NQPVVSIMR 1148
V +R
Sbjct: 401 ALEPVEALR 409
>gi|49243518|emb|CAG41942.1| putative permease protein [Staphylococcus
aureus subsp. aureus MSSA476]
dbj|BAB56361.1| similar to SA0193/BacI-like protein [Staphylococcus aureus subsp.
aureus Mu50]
ref|NP_373436.1| hypothetical protein SA0193 [Staphylococcus aureus subsp. aureus
N315]
pir||C89782 hypothetical protein SA0193 [imported] - Staphylococcus aureus
(strain N315)
ref|YP_042296.1| putative permease protein [Staphylococcus aureus subsp. aureus
MSSA476]
dbj|BAB41414.1| SA0193 [Staphylococcus aureus subsp. aureus N315]
ref|NP_370723.1| similar to SA0193/BacI-like protein [Staphylococcus aureus subsp.
aureus Mu50]
Length = 392
Score = 50.8 bits (120), Expect = 2e-04
Identities = 39/186 (20%), Positives = 86/186 (45%), Gaps = 4/186 (2%)
Query: 963 IPMNQVILKLNTDDKDAVESIKNRLNSFLIGNLREDFDMLDYYEKIKPFATASVIIQYFF 1022
+P Q+I++ + K V+ +++ LN G++ ++ D E IK I YF
Sbjct: 211 LPTLQIIIEDGYNKKTVVKKVESLLNKKGSGSVLGEYTYTDTEEIIKSIDKIFDSITYFV 270
Query: 1023 SFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSM 1082
+ +++ I+ +M+ +Y ++ E+T+EI + A G + ++ E+ ++ + S
Sbjct: 271 AAVAGISLFIAGIGVMNVMYISVAERTEEIAIRRAFGAKSRDIELQFLIESILICVTSGF 330
Query: 1083 LGMFIGSTVGFTMILQRQLFTMLPIPMTLPWQLIIIVFICSMFFSFFSAFGPIRKVLNQP 1142
+G+ +G V F I+ + T I + +II S+ + P R +
Sbjct: 331 IGLILG--VVFATII--DVLTPDYIKSVVSLSSVIIAVSVSILIGLLFGWIPARAASKKE 386
Query: 1143 VVSIMR 1148
++ I++
Sbjct: 387 LIDIIK 392
>gi|21203338|dbj|BAB94039.1| MW0174 [Staphylococcus aureus subsp.
aureus MW2]
ref|NP_644989.1| hypothetical protein MW0174 [Staphylococcus aureus subsp. aureus MW2]
Length = 328
Score = 50.8 bits (120), Expect = 2e-04
Identities = 39/186 (20%), Positives = 86/186 (45%), Gaps = 4/186 (2%)
Query: 963 IPMNQVILKLNTDDKDAVESIKNRLNSFLIGNLREDFDMLDYYEKIKPFATASVIIQYFF 1022
+P Q+I++ + K V+ +++ LN G++ ++ D E IK I YF
Sbjct: 147 LPTLQIIIEDGYNKKTVVKKVESLLNKKGSGSVLGEYTYTDTEEIIKSIDKIFDSITYFV 206
Query: 1023 SFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSM 1082
+ +++ I+ +M+ +Y ++ E+T+EI + A G + ++ E+ ++ + S
Sbjct: 207 AAVAGISLFIAGIGVMNVMYISVAERTEEIAIRRAFGAKSRDIELQFLIESILICVTSGF 266
Query: 1083 LGMFIGSTVGFTMILQRQLFTMLPIPMTLPWQLIIIVFICSMFFSFFSAFGPIRKVLNQP 1142
+G+ +G V F I+ + T I + +II S+ + P R +
Sbjct: 267 IGLILG--VVFATII--DVLTPDYIKSVVSLSSVIIAVSVSILIGLLFGWIPARAASKKE 322
Query: 1143 VVSIMR 1148
++ I++
Sbjct: 323 LIDIIK 328
>gi|46141854|ref|ZP_00147321.2| COG0577: ABC-type antimicrobial
peptide transport system, permease component
[Methanococcoides burtonii DSM 6242]
Length = 404
Score = 50.8 bits (120), Expect = 2e-04
Identities = 34/159 (21%), Positives = 76/159 (47%), Gaps = 19/159 (11%)
Query: 972 LNTDDKDAVESIKNRLNSFLIGNLREDFDMLDYYEKIKP---FATASVIIQY-------- 1020
+ +D ++V + + ++ + +L LD E +KP F A ++ Q
Sbjct: 221 ITVEDAESVRPVSDEIDKKIARSLGVSERELDN-EDVKPYTIFNQADILDQLDELSTGLT 279
Query: 1021 -FFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMA 1079
F ++++ + +M+ + + E+TKEIG+L +LG +S ++ +++ E+ +L +
Sbjct: 280 SLFISVALISLIVGSIGIMNIMLVTVTERTKEIGLLRSLGFTRSNILSLFITESIILGLI 339
Query: 1080 SSMLGMFIGSTVGFTMILQRQLFTMLPIPMTLPWQLIII 1118
+LG F+G + + T+L +P P L ++
Sbjct: 340 GGILGTFLGLVGSYAAV------TILGLPYIFPMYLFVL 372
>gi|54307852|ref|YP_128872.1| hypothetical protein PBPRA0649
[Photobacterium profundum SS9]
emb|CAG19070.1| conserved hypothetical protein [Photobacterium profundum]
Length = 444
Score = 50.4 bits (119), Expect = 3e-04
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 19/158 (12%)
Query: 1000 DMLDYYEKIKPFATASVIIQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALG 1059
D +Y K+K + + F TV+ + + F +L +++ + E+T+EIG L ALG
Sbjct: 293 DRAFFYNKVK-----DLYDRIFGIMGTVMGLVV-FVALFNTMTMTVTERTREIGTLSALG 346
Query: 1060 IPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVGFTMILQRQLFTMLPIP----------M 1109
S ++R ++ EA +L + SMLG ++ +L + +P P +
Sbjct: 347 SYPSEIVRGFLCEAGLLALIGSMLG---AASNALMCVLLLFVDVQMPPPPGRSEGYPLNI 403
Query: 1110 TLPWQLIIIVFICSMFFSFFSAFGPIRKVLNQPVVSIM 1147
++L+ + I MF +AF RK +N+P+ +
Sbjct: 404 YFSFELVALTTIGVMFICLLAAFFSARKGVNKPITEAL 441
>gi|11498622|ref|NP_069850.1| hypothetical protein AF1017
[Archaeoglobus fulgidus DSM 4304]
gb|AAB90225.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
pir||A69377 conserved hypothetical protein AF1017 - Archaeoglobus fulgidus
Length = 377
Score = 50.4 bits (119), Expect = 3e-04
Identities = 39/151 (25%), Positives = 78/151 (50%), Gaps = 18/151 (11%)
Query: 957 FSSVREIPMNQVILKLNTDDK--DAVESIKNRLNSFLIGNLRED----FDMLDYYEKIKP 1010
F V ++ +I+K + +K D + I+ ++NS R++ FD+ E+I
Sbjct: 188 FEKVSDVGYTMLIVKAESLEKVDDVKKEIEEKINS------RDEKVVVFDLKIILERINE 241
Query: 1011 FATASVIIQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYV 1070
A I F +++ ++ S+++ + + +E+TKEIG++ A+G +S ++RI++
Sbjct: 242 ---AFSQINTFLMAIASVSLLVAGVSILNIMLMSTIERTKEIGIMRAIGAYRSTILRIFL 298
Query: 1071 YEAFVLVMASSMLGMFIGSTVGFT---MILQ 1098
EA +L + S +G + G+ MILQ
Sbjct: 299 MEALILGLIGSAIGSVLSIAGGYAIDLMILQ 329
>gi|41718726|ref|ZP_00147695.1| COG0577: ABC-type antimicrobial
peptide transport system, permease component
[Methanococcoides burtonii DSM 6242]
Length = 423
Score = 50.4 bits (119), Expect = 3e-04
Identities = 37/204 (18%), Positives = 90/204 (43%), Gaps = 13/204 (6%)
Query: 949 YLSYASSIFSSVREIPMNQVILKLNTDDKDAVESIKNRLNS----FLIGNLREDFDMLDY 1004
Y + ++ S+ L+ D+ D + R+N F I + +E M++
Sbjct: 227 YSTLQKGVYDSIEVKLYKNAELQPALDEMDKKLKLSRRVNEDTKDFYIHSQQE---MMES 283
Query: 1005 YEKIKPFATASVIIQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSW 1064
K+ TA F +F +++ + + +++++++LE+TKEIG++ A+G
Sbjct: 284 TNKLISGLTA------FLAFIAGISLLVGSVGIANTMFTSVLEKTKEIGIMKAIGARNED 337
Query: 1065 MIRIYVYEAFVLVMASSMLGMFIGSTVGFTMILQRQLFTMLPIPMTLPWQLIIIVFICSM 1124
++ I++ A ++ + ++G+ G+ ++ + +P TL + ++ + S+
Sbjct: 338 VLLIFLCNAALIGLVGGIIGILFGTAFVQVIVYLISMQLKIPFVFTLSVKATVVATLVSI 397
Query: 1125 FFSFFSAFGPIRKVLNQPVVSIMR 1148
+ F P + V +R
Sbjct: 398 GVGLIAGFMPAKSAAKLNPVDALR 421
>gi|57238673|ref|YP_179804.1| ABC transporter, permease protein
[Campylobacter jejuni RM1221]
gb|AAW36256.1| ABC transporter, permease protein [Campylobacter jejuni RM1221]
Length = 372
Score = 50.1 bits (118), Expect = 4e-04
Identities = 33/124 (26%), Positives = 62/124 (49%), Gaps = 12/124 (9%)
Query: 1018 IQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLV 1077
+ + ++ +T S + +SS+ I + KEI + ALG KS + +++ E F++
Sbjct: 248 LMFLIILVVLIIVTTSVNTTLSSI---IFSRKKEIALRLALGAKKSEIFKLFASECFIVS 304
Query: 1078 MASSMLGMFIGSTVGFTMILQRQLFTMLPIPMTLPWQLI--IIVFICSMFFSFFSAFGPI 1135
+S++G F G I +F L ++ ++ I I I S+ F+F +AF PI
Sbjct: 305 FFASLIGAFCG-------IFLANVFGYLIFNSSIDFRFIAVFIALIISLIFAFLAAFFPI 357
Query: 1136 RKVL 1139
++ L
Sbjct: 358 KRAL 361
>gi|20089338|ref|NP_615413.1| hypothetical protein MA0447
[Methanosarcina acetivorans C2A]
gb|AAM03893.1| conserved hypothetical protein [Methanosarcina acetivorans str. C2A]
Length = 403
Score = 50.1 bits (118), Expect = 4e-04
Identities = 30/128 (23%), Positives = 64/128 (49%), Gaps = 6/128 (4%)
Query: 1021 FFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMAS 1080
F + ++++ + +M+ + ++ E+T+EIGVL +LG ++ +++ E+ +L +
Sbjct: 280 FLTAVALISLLVGSIGIMNIMLVSVTERTREIGVLKSLGFTGFDILFLFMVESILLGVFG 339
Query: 1081 SMLGMFIGSTVGFTMILQRQLFTMLPIPMTLPWQLIIIVFICSMFFSFFSAFGPIRKVLN 1140
+LG +G ++ + ++L +P+ P LI FI ++ F S P RK
Sbjct: 340 GILGGAVGIAGAYS------VESLLNLPVVFPLSLIFAGFIVAVAVGFVSGVYPARKAAK 393
Query: 1141 QPVVSIMR 1148
V +R
Sbjct: 394 MKPVDSLR 401
>gi|45358434|ref|NP_987991.1| hypothetical protein MMP0871
[Methanococcus maripaludis S2]
emb|CAF30427.1| conserved hypothetical membrane protein [Methanococcus maripaludis
S2]
Length = 397
Score = 50.1 bits (118), Expect = 4e-04
Identities = 39/181 (21%), Positives = 79/181 (43%), Gaps = 3/181 (1%)
Query: 956 IFSSVREIPMNQVILKLNTDDKDAVESIKNRLNSFLIGNLREDFDMLDYYEKIKPFATAS 1015
+F E M V ++ D E IK+ L E+F +L + + +
Sbjct: 206 LFEINNEYNMMIVSVRSGEDVNLVSEEIKDELED---SRGDENFSVLTAEQLAESINSIF 262
Query: 1016 VIIQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFV 1075
++ F +++ + + ++++ +ILE+ K+IG+L ALG + ++ I+V EA
Sbjct: 263 EVLTIFLVGVAGISLLVGAVGISNTMHMSILERRKDIGILKALGAENTTILSIFVVEAGF 322
Query: 1076 LVMASSMLGMFIGSTVGFTMILQRQLFTMLPIPMTLPWQLIIIVFICSMFFSFFSAFGPI 1135
L + ++G +G + + + I + W+LI+ V + S S + P
Sbjct: 323 LGLFGGIVGTMLGILIAKAIEYIAAISGYGLIRAWISWELIVGVLVFSFVVGILSGYFPA 382
Query: 1136 R 1136
R
Sbjct: 383 R 383
>gi|24377785|gb|AAN59077.1| putative ABC transporter, membrane protein
subunit and ATP-binding protein [Streptococcus mutans
UA159]
ref|NP_721771.1| putative ABC transporter, membrane protein subunit and ATP-binding
protein [Streptococcus mutans UA159]
Length = 842
Score = 50.1 bits (118), Expect = 4e-04
Identities = 54/204 (26%), Positives = 94/204 (45%), Gaps = 33/204 (16%)
Query: 971 KLNTDDKDAVESIKNRLNSFLIGNLREDFDMLDYYEKIKPFATASVIIQY-------FFS 1023
K+ D + E+I +SF +D + DY +K+K S +I+Y S
Sbjct: 644 KIGIIDNNNPETIHFYASSFKDKEALKDL-ISDYNKKVKKDKHKSRVIRYTDTVGLMMSS 702
Query: 1024 FTTVL-----------AMTISFFSLMSSV--YSNILEQTKEIGVLCALGIPKSWMIRIYV 1070
TT++ A+++ S+M + Y ++LE+TKEIGVL A+G K + RI+
Sbjct: 703 VTTMINAVTYILIGFVAISLIVSSIMIGIITYISVLERTKEIGVLRAMGASKRDVTRIFT 762
Query: 1071 YEAFVLVMASSMLGMFIG--STVGFTMILQRQL----FTMLPIPMTLPWQLIIIVFICSM 1124
E + + +LG+ I + T+I++ L + LPI W I+++ I S+
Sbjct: 763 AETIIEGAIAGVLGILITLLLNIAITLIVKNWLNINHISSLPI-----WSAIVLIAI-SI 816
Query: 1125 FFSFFSAFGPIRKVLNQPVVSIMR 1148
+ F+ P R + V +R
Sbjct: 817 VLTVFAGILPSRVAAKKDPVEALR 840
>gi|34763698|ref|ZP_00144622.1| EXPORT ABC TRANSPORTER PERMEASE
PROTEIN [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
gb|EAA23783.1| EXPORT ABC TRANSPORTER PERMEASE PROTEIN [Fusobacterium nucleatum
subsp. vincentii ATCC 49256]
Length = 408
Score = 50.1 bits (118), Expect = 4e-04
Identities = 34/148 (22%), Positives = 77/148 (51%), Gaps = 13/148 (8%)
Query: 977 KDAVESIKNRLNSFLIGNLREDFDMLDYYEKIKPFATASVIIQYFFSFTTVLAMTISFFS 1036
K+ +E KN N ++ + D + D K +T S+ F + +++ +
Sbjct: 250 KNILEFNKNAKNLYVTNAVSNDIESFD-----KILSTLSL----FVTLAASISLLVGGIG 300
Query: 1037 LMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVGF--- 1093
+M+ + ++E+TKEIG+ ALG +++ +++E+ +L + ++GM +G G
Sbjct: 301 VMNIMLVTVVERTKEIGIRKALGAKNRDILKQFLFESIILTVLGGLIGMVVGIFFGLLTG 360
Query: 1094 TMILQRQLFTMLPIPMTLPWQLII-IVF 1120
++ + +F++L I ++L +I+ I+F
Sbjct: 361 AIMGIKPIFSLLSIIVSLSISVIVGIIF 388
>gi|6969078|emb|CAB73649.1| putative integral membrane protein
[Campylobacter jejuni subsp. jejuni NCTC 11168]
pir||C81263 probable integral membrane protein Cj1662 [imported] - Campylobacter
jejuni (strain NCTC 11168)
ref|NP_282789.1| putative integral membrane protein [Campylobacter jejuni subsp.
jejuni NCTC 11168]
Length = 372
Score = 50.1 bits (118), Expect = 4e-04
Identities = 33/124 (26%), Positives = 62/124 (49%), Gaps = 12/124 (9%)
Query: 1018 IQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLV 1077
+ + ++ +T S + +SS+ I + KEI + ALG KS + +++ E F++
Sbjct: 248 LMFLIILVVLIIVTTSVNTTLSSI---IFSRKKEIALRLALGAKKSEIFKLFASECFIVS 304
Query: 1078 MASSMLGMFIGSTVGFTMILQRQLFTMLPIPMTLPWQLI--IIVFICSMFFSFFSAFGPI 1135
+S++G F G I +F L ++ ++ I I I S+ F+F +AF PI
Sbjct: 305 FFASLIGAFCG-------IFLANVFGYLIFNSSIDFRFIAVFIALIISLIFAFLAAFFPI 357
Query: 1136 RKVL 1139
++ L
Sbjct: 358 KRAL 361
>gi|51245480|ref|YP_065364.1| similar to lipoprotein releasing system
transmembrane protein (LolC) [Desulfotalea psychrophila
LSv54]
emb|CAG36357.1| related to lipoprotein releasing system transmembrane protein (LolC)
[Desulfotalea psychrophila LSv54]
Length = 410
Score = 50.1 bits (118), Expect = 4e-04
Identities = 33/115 (28%), Positives = 62/115 (53%), Gaps = 10/115 (8%)
Query: 1028 LAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFI 1087
L + ++ +++S++ ++E+TK+I +L ++G S ++RI+ ++ V+ + LG +
Sbjct: 284 LIILVAALNIVSALIMVVMEKTKDIAILKSMGATSSSIMRIFFFQGLVIAFLGTGLG--V 341
Query: 1088 GSTVGFTMILQRQLFTMLP---IPM-TLPWQLI----IIVFICSMFFSFFSAFGP 1134
+G +L R F LP PM TLP Q+I IIV CS+ + + P
Sbjct: 342 AGGLGLCQLLSRYKFIELPANVYPMTTLPIQVIPSDVIIVAACSIIITLLATLYP 396
>gi|4098079|gb|AAD09219.1| ABC transporter membrane protein subunit
[Streptococcus mutans]
Length = 498
Score = 50.1 bits (118), Expect = 4e-04
Identities = 53/204 (25%), Positives = 94/204 (45%), Gaps = 33/204 (16%)
Query: 971 KLNTDDKDAVESIKNRLNSFLIGNLREDFDMLDYYEKIKPFATASVIIQY-------FFS 1023
K+ D + E+I +SF +D + DY +K+K S +I+Y S
Sbjct: 300 KIGIIDNNNPETIHFYASSFKDKEALKDL-ISDYNKKVKKDKHKSRVIRYTDTVGLMMSS 358
Query: 1024 FTTVL-----------AMTISFFSLMSSV--YSNILEQTKEIGVLCALGIPKSWMIRIYV 1070
TT++ A+++ S+M + Y ++LE+TKEIG+L A+G K + RI+
Sbjct: 359 VTTMINAVTYILIGFVAISLIVSSIMIGIITYISVLERTKEIGILRAMGASKRDVTRIFT 418
Query: 1071 YEAFVLVMASSMLGMFIG--STVGFTMILQRQL----FTMLPIPMTLPWQLIIIVFICSM 1124
E + + +LG+ I + T+I++ L + LPI W I+++ I S+
Sbjct: 419 AETIIEGAIAGVLGILITLLLNIAITLIVKNWLNINHISSLPI-----WSAIVLIAI-SI 472
Query: 1125 FFSFFSAFGPIRKVLNQPVVSIMR 1148
+ F+ P R + V +R
Sbjct: 473 LLTVFAGILPSRVAAKKDPVEALR 496
>gi|23335401|ref|ZP_00120637.1| COG1136: ABC-type antimicrobial
peptide transport system, ATPase component
[Bifidobacterium longum DJO10A]
Length = 950
Score = 50.1 bits (118), Expect = 4e-04
Identities = 48/216 (22%), Positives = 92/216 (42%), Gaps = 16/216 (7%)
Query: 941 DSIVSFPTYLSYASSIFSSVREIPMNQVILKLNTDDKDAVESIKNRLNSFLIGNLREDFD 1000
D VS TY ++ R+ P + + + +DKD + N+ + + +
Sbjct: 741 DQYVSTGTYDDNLAAFGVVSRDAPSSINVYADSFEDKDHIADAITDYNNTV--SKKNKIT 798
Query: 1001 MLDYYEKIKPFATASV-IIQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALG 1059
DY + T V +I Y +++ +S + Y ++LE+TKEIG+L A+G
Sbjct: 799 YTDYVGLMMSSVTTIVNVISYVLIAFVSVSLIVSSIMIGIITYISVLERTKEIGILRAMG 858
Query: 1060 IPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVGFTMILQRQLFTML-------PIPMTLP 1112
K + +++ E ++ + S +LG VG T++L + +L + LP
Sbjct: 859 ASKHNVSQVFNAETGIIGLCSGLLG------VGLTVLLDIPINAVLHHFIGNADVNAALP 912
Query: 1113 WQLIIIVFICSMFFSFFSAFGPIRKVLNQPVVSIMR 1148
+++ I S+ + P RK Q + +R
Sbjct: 913 VTGGVVLVILSVVLTLIGGLIPSRKAAKQDPATALR 948
>gi|9658285|gb|AAF96752.1| conserved hypothetical protein [Vibrio
cholerae O1 biovar eltor str. N16961]
ref|NP_233240.1| hypothetical protein VCA0854 [Vibrio cholerae O1 biovar eltor str.
N16961]
pir||D82408 conserved hypothetical protein VCA0854 [imported] - Vibrio cholerae
(strain N16961 serogroup O1)
Length = 419
Score = 49.7 bits (117), Expect = 5e-04
Identities = 46/214 (21%), Positives = 103/214 (47%), Gaps = 21/214 (9%)
Query: 949 YLSYASSIFSSVREIPMNQVILKLNTDDKDAVES-IKNRLNSFLIGNLREDFDMLDYYEK 1007
+L+ A + +S + ++ + NT++ +++ ++N+LN +L ++ + + +
Sbjct: 215 HLASAQELLNSSKVSTLS--VYLFNTENTQTLQTWVENQLNQL---SLSQELQVTPWQQL 269
Query: 1008 IKPFATASVIIQYFFSFT-TVLAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMI 1066
+ + F TV+AM + F +L +++ ++ E+T+EIG L ALG S ++
Sbjct: 270 AFFYTRVKDLYDRLFGVMGTVMAMVV-FVALFNTLTMSVSERTREIGTLSALGAYPSDIL 328
Query: 1067 RIYVYEAFVLVMASSMLGMFIGSTVGFTMILQRQLFTMLP--------IPMTLPWQLIII 1118
+V EA +L + S+LG + G T++ R +P P+ L + ++
Sbjct: 329 AGFVREATLLALCGSLLGTLL---TGITIVAVRVADIQMPPPPGRTEGYPLDLYFSFTLV 385
Query: 1119 VF--ICSMFFSFFSAFGPIRKVLNQPVVSIMRVV 1150
F + ++ +A+ RK +N+P+ + V
Sbjct: 386 GFCTLGTVLICVLAAWFSARKGVNKPITEALAYV 419
>gi|28900079|ref|NP_799734.1| putative ABC transporter, ATP-binding
protein [Vibrio parahaemolyticus RIMD 2210633]
dbj|BAC61567.1| putative ABC transporter, ATP-binding protein [Vibrio
parahaemolyticus RIMD 2210633]
Length = 654
Score = 49.7 bits (117), Expect = 5e-04
Identities = 34/141 (24%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 1009 KPFATASVIIQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRI 1068
K AT +++I S V+++ + +M+ + ++ E+TKEIGV A+G ++ ++R
Sbjct: 522 KTTATMTLLI----SAIAVISLIVGGIGVMNIMLVSVTERTKEIGVRMAVGARQADILRQ 577
Query: 1069 YVYEAFVLVMASSMLGMFIGSTVGFTMILQRQLFTMLPIPMTLPWQLIIIVFICSMFFSF 1128
++ EA ++ + + G+ + +GF F M+ ++ W FICS
Sbjct: 578 FLIEAVLVCLCGGIAGIGLAFLIGFAFSTSGSSFQMIYSMNSIIW-----AFICSTLIGI 632
Query: 1129 FSAFGPIRKVLN-QPVVSIMR 1148
F P R P+ ++ R
Sbjct: 633 AFGFLPARNAAKLDPIEALAR 653
>gi|21227053|ref|NP_632975.1| ABC transporter, permease protein
[Methanosarcina mazei Go1]
gb|AAM30647.1| ABC transporter, permease protein [Methanosarcina mazei Goe1]
Length = 404
Score = 49.7 bits (117), Expect = 5e-04
Identities = 35/150 (23%), Positives = 69/150 (45%), Gaps = 9/150 (6%)
Query: 999 FDMLDYYEKIKPFATASVIIQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCAL 1058
FD D E+ A + F ++++ + +M+ + + E+T+EIG++ ++
Sbjct: 262 FDQADVLEETGALGKA---LSTFLLVLALISLFVGSIGIMNIMLVTVTERTREIGIMKSV 318
Query: 1059 GIPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVGFTMILQRQLFTMLPIPMTLPWQLIII 1118
G S ++ +++ E+ ++ +LG IG GF + L L +P P++LI I
Sbjct: 319 GYSSSNILSLFLLESIMVSSLGGLLGTAIG---GFGAYI---LEEALKLPPVFPFKLIEI 372
Query: 1119 VFICSMFFSFFSAFGPIRKVLNQPVVSIMR 1148
+ S+ + P RK N V +R
Sbjct: 373 GILISVLVGVGAGLYPARKAANMNPVDALR 402
>gi|49236576|ref|ZP_00330634.1| COG0577: ABC-type antimicrobial
peptide transport system, permease component [Moorella
thermoacetica ATCC 39073]
Length = 408
Score = 49.7 bits (117), Expect = 5e-04
Identities = 38/216 (17%), Positives = 94/216 (42%), Gaps = 14/216 (6%)
Query: 939 NQDSIVSFPTYLSYASSIFSSVREIPMNQVILKLNTDDKDAVESIKNRLNSFLI------ 992
+QD I+ P ++ A F +P + ++ + D ++ +++ + S L
Sbjct: 199 DQDDIIYIP--ITTAQRRFLGQGVVPNSVRMINVQAQDTTSLTAVQEEITSLLRQRHHLG 256
Query: 993 GNLREDFDMLDYYEKIKPFATASVIIQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEI 1052
N +DF + + + A A+ + + +++ + +M+ + ++ E+T+EI
Sbjct: 257 ANQDDDFRIQNMTAVLDTVAAATGSMTLLLAGIAAVSLLVGGIGIMNIMLVSVTERTREI 316
Query: 1053 GVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVGFTMILQRQLFTMLPIPMTLP 1112
G+ A+G + ++ ++ EA +L + ++G+ G +G ++ + + PM
Sbjct: 317 GIRMAVGATRGAILTQFLVEAMILSLVGGLIGV-AGGIIGSKVVAMLAKWPAVLNPMA-- 373
Query: 1113 WQLIIIVFICSMFFSFFSAFGPIRKVLNQPVVSIMR 1148
I++ + F + P RK N + +R
Sbjct: 374 ---ILLAMGFAALVGIFFGYYPARKAANADPIEALR 406
>gi|56414005|ref|YP_151080.1| conserved hypothetical ABC transporter
[Salmonella enterica subsp. enterica serovar Paratypi A
str. ATCC 9150]
gb|AAV77768.1| conserved hypothetical ABC transporter [Salmonella enterica subsp.
enterica serovar Paratypi A str. ATCC 9150]
Length = 648
Score = 49.3 bits (116), Expect = 7e-04
Identities = 41/180 (22%), Positives = 81/180 (44%), Gaps = 20/180 (11%)
Query: 976 DKDAVESIKNRLNSFLIGNLREDFDMLDYYEKIKPFATASVIIQYFFSFTTVLAMTISFF 1035
D D E RL + G ++DF + +K + +Q F + V+++ +
Sbjct: 481 DSDQAEQQLTRLLTLRHG--KKDFFTWNMDSVLKTAEKTTYTLQLFLTLVAVISLVVGGI 538
Query: 1036 SLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVGFTM 1095
+M+ + ++ E+T+EIG+ A+G S +++ ++ EA ++ + LG+ + + F +
Sbjct: 539 GVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAMLVCLVGGALGISLSMFIAFML 598
Query: 1096 ILQRQLFTMLPIPMTLPWQL------IIIVFICSMFFSFFSAFGPIRKVLN-QPVVSIMR 1148
QLF LP W++ + F+CS F + P R PV ++ R
Sbjct: 599 ----QLF--LP-----GWEIGFSLTALASAFLCSTFTGILFGWLPARNAARLDPVDALAR 647
>gi|42524549|ref|NP_969929.1| ABC-type lipoprotein transporter,
permease protein. [Bdellovibrio bacteriovorus HD100]
emb|CAE80922.1| ABC-type lipoprotein transporter, permease protein. [Bdellovibrio
bacteriovorus HD100]
Length = 402
Score = 49.3 bits (116), Expect = 7e-04
Identities = 41/163 (25%), Positives = 75/163 (45%), Gaps = 23/163 (14%)
Query: 999 FDMLD--YYEKIKPFATASVIIQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLC 1056
F++LD YY+ F A FSF + + I + + + + +LE+ E+G L
Sbjct: 248 FEILDKNYYQNSVDFLNAQ------FSFIRSIILVIVAMGIFNVISTGLLERAGEMGALR 301
Query: 1057 ALGIPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVGFTMILQ-----------RQLFTML 1105
A G +S + +I + E +L + LG+ I V T++ Q RQ F L
Sbjct: 302 ANGEKRSRLFKILMIENSLLGILGGFLGICIAILVDATLLRQGIPMPPAPGITRQFFVFL 361
Query: 1106 PIPMTLPWQLIIIVFICSMFFSFFSAFGPIRKVLNQPVVSIMR 1148
I + Q +++ I ++ S + P+RK+L + + ++R
Sbjct: 362 DIQPSHYLQALLLPMIATVVASLW----PVRKLLKKSIPELLR 400
>gi|28898771|ref|NP_798376.1| hypothetical protein VP1997 [Vibrio
parahaemolyticus RIMD 2210633]
dbj|BAC60260.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
Length = 404
Score = 49.3 bits (116), Expect = 7e-04
Identities = 30/117 (25%), Positives = 60/117 (50%), Gaps = 4/117 (3%)
Query: 1018 IQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLV 1077
IQ F + + M + + + ++ ++ E+T+EIGV A+G + ++ ++ E F+LV
Sbjct: 273 IQIFLGASGAMTMAVGALGVANIMFLSVTERTREIGVRLAIGATQKSILSQFILEGFILV 332
Query: 1078 MASSMLG-MFIGSTVGFTMILQRQLFTMLPI--PMTLPWQLIIIVFICSMFFSFFSA 1131
+ LG MF + V + + LP+ P ++ W L ++ I ++ S+F A
Sbjct: 333 AVGTALGLMFSYAVVSVLSSMALPEWIGLPVITPDSIAWSL-LVTLILALMASYFPA 388
>gi|29655095|ref|NP_820787.1| ABC transporter, permease protein
[Coxiella burnetii RSA 493]
gb|AAO91301.1| ABC transporter, permease protein [Coxiella burnetii RSA 493]
Length = 404
Score = 49.3 bits (116), Expect = 7e-04
Identities = 25/105 (23%), Positives = 59/105 (55%), Gaps = 1/105 (0%)
Query: 1028 LAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFI 1087
+A+ + +M+ +Y +++E+ +EIG+ A+G ++ + R+++ EA +L + +LG+ +
Sbjct: 288 IALLVGGIGVMNIMYVSVIERRREIGIRMAVGARRANIRRMFLVEAIILTLFGGLLGILV 347
Query: 1088 GSTVGFTMILQRQL-FTMLPIPMTLPWQLIIIVFICSMFFSFFSA 1131
G + + L F +L P L + + ++V + S F+ + A
Sbjct: 348 GVAIASILALATGWGFRILLFPPILGFVISVLVGVISGFYPAYRA 392
>gi|50365077|ref|YP_053502.1| unknown substrate ABC transporter
permease component [Mesoplasma florum L1]
gb|AAT75618.1| unknown substrate ABC transporter permease component [Mesoplasma
florum L1]
Length = 1693
Score = 48.9 bits (115), Expect = 9e-04
Identities = 49/196 (25%), Positives = 90/196 (45%), Gaps = 21/196 (10%)
Query: 973 NTDDKDAVESIKNRLNSFLIGNLREDFDMLDYY----EKIKPFATA----------SVII 1018
+T +A + K F+ N + D D+ +Y +K K FA + V++
Sbjct: 540 DTPSSNAEKIAKTYAKRFIWTNEKSDIDLFNYLFAPSQKAKTFAESVYRFSWDLQPQVVL 599
Query: 1019 QYFFSFTTVLAMTISFFSL---MSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFV 1075
Y FT ++++ I +L + S+ +I TK+IG+L ALG+ + Y+ ++ +
Sbjct: 600 AYSL-FTIIISLIIGVIALSGLLISLKKSIKANTKQIGILKALGVEPHNIALSYIAQSVI 658
Query: 1076 LVMASSMLGMFIGSTV--GFTMILQRQLFTMLPIPMTLPWQLIIIVFICSMFFSFFSAFG 1133
+ + L IG V GF + F++ + + +II FI F S +F
Sbjct: 659 IAIFIIPLSWGIGLLVQSGFVHLF-IPYFSIQLYQIQVSVLPLIIGFIFFGFLSVMVSFL 717
Query: 1134 PIRKVLNQPVVSIMRV 1149
++ N+PV+ I+RV
Sbjct: 718 VAWRLTNKPVIEILRV 733
>gi|51596268|ref|YP_070459.1| putative ABC transporter, permease
subunit [Yersinia pseudotuberculosis IP 32953]
ref|NP_993041.1| putative membrane protein [Yersinia pestis biovar Medievalis str.
91001]
ref|NP_405503.1| putative membrane protein [Yersinia pestis CO92]
ref|NP_669673.1| putative ABC inner membrane permease [Yersinia pestis KIM]
gb|AAS61918.1| putative membrane protein [Yersinia pestis biovar Medievalis str.
91001]
gb|AAM85924.1| putative ABC inner membrane permease [Yersinia pestis KIM]
emb|CAC90759.1| putative membrane protein [Yersinia pestis CO92]
emb|CAA21357.1| yp16 [Yersinia pestis]
emb|CAH21180.1| putative ABC transporter, permease subunit [Yersinia
pseudotuberculosis IP 32953]
pir||AC0237 probable membrane protein YPO1944 [imported] - Yersinia pestis
(strain CO92)
pir||T47014 hypothetical protein [imported] - Yersinia pestis
Length = 430
Score = 48.9 bits (115), Expect = 9e-04
Identities = 29/130 (22%), Positives = 62/130 (47%), Gaps = 5/130 (3%)
Query: 1018 IQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLV 1077
IQ + T+ A+ + + S + S I+E+ KEIG++ ALG + ++ ++ EA +
Sbjct: 303 IQLLLAVVTLAALIAAAMGIASLMTSTIMERAKEIGLMKALGARQWQILMLFYLEAAISG 362
Query: 1078 MASSMLGMFIGSTVGFTMILQRQLFTMLPIPMTLPWQLIIIVFICSMFFSFFSAFGPIRK 1137
+ + G G + T+ L + P++ W ++ V + S+ + F + P R+
Sbjct: 363 LMGGVAGCLAGWGLAKTIGLM-----LFGAPISFAWMVVPCVLVLSVLIAVFGTWFPARR 417
Query: 1138 VLNQPVVSIM 1147
+ V ++
Sbjct: 418 ITRLYPVEVL 427
>gi|29142412|ref|NP_805754.1| conserved hypothetical ABC transporter
[Salmonella enterica subsp. enterica serovar Typhi Ty2]
ref|NP_455432.1| conserved hypothetical ABC transporter [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
emb|CAD05344.1| conserved hypothetical ABC transporter [Salmonella enterica subsp.
enterica serovar Typhi]
gb|AAO69603.1| conserved hypothetical ABC transporter [Salmonella enterica subsp.
enterica serovar Typhi Ty2]
pir||AF0609 conserved hypothetical ABC transporter ybjZ [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
Length = 648
Score = 48.9 bits (115), Expect = 9e-04
Identities = 41/180 (22%), Positives = 81/180 (44%), Gaps = 20/180 (11%)
Query: 976 DKDAVESIKNRLNSFLIGNLREDFDMLDYYEKIKPFATASVIIQYFFSFTTVLAMTISFF 1035
D D E RL + G ++DF + +K + +Q F + V+++ +
Sbjct: 481 DSDQAEQQLTRLLTLRHG--KKDFFTWNMDSVLKTAEKTTYTLQLFLTLVAVISLVVGGI 538
Query: 1036 SLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVGFTM 1095
+M+ + ++ E+T+EIG+ A+G S +++ ++ EA ++ + LG+ + + F +
Sbjct: 539 GVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGISLSMFIAFML 598
Query: 1096 ILQRQLFTMLPIPMTLPWQL------IIIVFICSMFFSFFSAFGPIRKVLN-QPVVSIMR 1148
QLF LP W++ + F+CS F + P R PV ++ R
Sbjct: 599 ----QLF--LP-----GWEIGFSLTALASAFLCSTFTGILFGWLPARNAARLDPVDALAR 647
>gi|32263408|gb|AAP78453.1| ABC transporter [Helicobacter hepaticus
ATCC 51449]
ref|NP_861387.1| ABC transporter [Helicobacter hepaticus ATCC 51449]
Length = 405
Score = 48.9 bits (115), Expect = 9e-04
Identities = 43/214 (20%), Positives = 93/214 (43%), Gaps = 11/214 (5%)
Query: 939 NQDSIVSFPTYLSYASSIFSSVREIPMNQVILKLN--TDDKDAVESIKNRLNSF--LIGN 994
+QD ++ P ++ S+ S +N+++L+ D + + ++ L +
Sbjct: 197 DQDDVILLPLK-TFLRSVSGSNTLFFVNRLMLRAKDGVDSEQMLPALTQALRQVRNVRAG 255
Query: 995 LREDFDMLDYYEKIKPFATASVIIQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGV 1054
R+ F+++D + + +A+ + F +++ + +M+ + ++ E+TKEIG
Sbjct: 256 DRDSFEIMDTKQIAETLTSATKRLTAFLGLIAGVSLVVGGIGIMNIMLVSVTERTKEIGT 315
Query: 1055 LCALGIPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVGFTMILQRQLFTMLPIPMTLPWQ 1114
A+G +S ++ ++ E+ L S LG IG F L + +P +P
Sbjct: 316 RMAIGALQSEVLMQFLIESITL----SSLGGIIGIIWAFFASLSLSYYMEIPFIFDIP-- 369
Query: 1115 LIIIVFICSMFFSFFSAFGPIRKVLNQPVVSIMR 1148
II F+ S F + P R+ + +R
Sbjct: 370 TAIIAFLFSAFIGVLFGYLPARRASKLNPIDALR 403
>gi|15893536|ref|NP_346885.1| Integral membrane protein (permease)
[Clostridium acetobutylicum ATCC 824]
gb|AAK78225.1| Integral membrane protein (permease) [Clostridium acetobutylicum ATCC
824]
pir||F96929 integral membrane protein (permease) [imported] - Clostridium
acetobutylicum
Length = 385
Score = 48.9 bits (115), Expect = 9e-04
Identities = 33/128 (25%), Positives = 69/128 (53%), Gaps = 10/128 (7%)
Query: 1012 ATASVIIQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVY 1071
+ +S++IQ F + VL +T S + +++++K+IG+L A+GI S RI+++
Sbjct: 253 SASSIMIQVFVLVSVVLGIT-------SVLAITVMQKSKQIGILKAMGIKDSAASRIFLF 305
Query: 1072 EAFVLVMASSMLGMFIGS--TVGFTMILQRQLFTMLPIPMTLPWQLIIIVFICSMFFSFF 1129
E +L + +++G+ +G T FT T + +P+ L ++ I+ + ++ +
Sbjct: 306 EGLILGIFGAVIGVALGLGWTYSFTKFAVNPDGTPV-VPLYLDYKFIVFSVVIAIASACI 364
Query: 1130 SAFGPIRK 1137
+A P RK
Sbjct: 365 AAIIPARK 372
>gi|15602315|ref|NP_245387.1| hypothetical protein PM0450 [Pasteurella
multocida subsp. multocida str. Pm70]
gb|AAK02534.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 440
Score = 48.9 bits (115), Expect = 9e-04
Identities = 30/130 (23%), Positives = 62/130 (47%), Gaps = 5/130 (3%)
Query: 1018 IQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLV 1077
IQ + TV A+ + + S + S I+E++KEIG++ ALG + ++ ++ EA +
Sbjct: 312 IQLLLAVVTVAAVIAAAMGIASLMTSTIIERSKEIGLMKALGAYQWQIVLLFYCEATISA 371
Query: 1078 MASSMLGMFIGSTVGFTMILQRQLFTMLPIPMTLPWQLIIIVFICSMFFSFFSAFGPIRK 1137
+ +LG G G + T+ +P+ W ++ V + S+ + + P +
Sbjct: 372 LFGGILGCLAG--WGLAKFIG---ITLFGLPLDFTWIVVPCVLVLSILIALIGTWFPAHR 426
Query: 1138 VLNQPVVSIM 1147
+ N V ++
Sbjct: 427 IANLYPVEVL 436
>gi|16419454|gb|AAL19878.1| putative ABC superfamily (atp&memb)
transport protein [Salmonella typhimurium LT2]
ref|NP_459919.1| putative transport protein [Salmonella typhimurium LT2]
Length = 648
Score = 48.9 bits (115), Expect = 9e-04
Identities = 41/180 (22%), Positives = 81/180 (44%), Gaps = 20/180 (11%)
Query: 976 DKDAVESIKNRLNSFLIGNLREDFDMLDYYEKIKPFATASVIIQYFFSFTTVLAMTISFF 1035
D D E RL + G ++DF + +K + +Q F + V+++ +
Sbjct: 481 DSDQAEQQLTRLLTLRHG--KKDFFTWNMDSVLKTAEKTTYTLQLFLTLVAVISLVVGGI 538
Query: 1036 SLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVGFTM 1095
+M+ + ++ E+T+EIG+ A+G S +++ ++ EA ++ + LG+ + + F +
Sbjct: 539 GVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGISLSMFIAFML 598
Query: 1096 ILQRQLFTMLPIPMTLPWQL------IIIVFICSMFFSFFSAFGPIRKVLN-QPVVSIMR 1148
QLF LP W++ + F+CS F + P R PV ++ R
Sbjct: 599 ----QLF--LP-----GWEIGFSLTALASAFLCSTFTGILFGWLPARNAARLDPVDALAR 647
>gi|32812399|emb|CAD97587.1| putative ABC transporter permease
[Clostridium beijerinckii]
Length = 422
Score = 48.9 bits (115), Expect = 9e-04
Identities = 37/181 (20%), Positives = 74/181 (40%), Gaps = 6/181 (3%)
Query: 968 VILKLNTDDKDAVESIKNRLNSFLIGNLREDFDMLDYYEKIKPFATASVIIQYFFSFTTV 1027
++ K N D + V+ I+ N +LD + ++ A I +
Sbjct: 246 IMPKSNVDSEKLVKDIEKHGEKLYKNNKHWTLYVLDNKKSMESIAAVFKSISIGIAVIAS 305
Query: 1028 LAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFI 1087
+A+ + +M+ + ++ E+T+EIG ALG + ++ E+ ++ +GM +
Sbjct: 306 IALLVGGIGVMNIMLVSVTERTREIGTRKALGARSGHIKTQFIIESVIICTIGGTIGMIL 365
Query: 1088 GSTVGFTMILQRQLFTMLPIPMTLPWQLIIIVFICSMFFSFFSAFGPIRKVLNQPVVSIM 1147
G +G L +L P+++ III F S F + P +K + +
Sbjct: 366 GVGMGVIACL------VLKSPISISIPSIIISFTFSTVIGVFFGYYPAKKAAQLDPIEAL 419
Query: 1148 R 1148
R
Sbjct: 420 R 420
>gi|19577297|emb|CAD27717.1| membrane subunit [Enterococcus faecalis
subsp. liquefaciens]
Length = 399
Score = 48.9 bits (115), Expect = 9e-04
Identities = 34/159 (21%), Positives = 81/159 (50%), Gaps = 10/159 (6%)
Query: 993 GNLRE--DFDMLDYYEKIKPFATASVIIQYFFSFTTVLAMTISFFSLMSSVYSNILEQTK 1050
G+LR ++++LD K I YF + +++ I+ +M+ +Y ++ E+TK
Sbjct: 248 GSLRHLGEYEVLDTAMLTKGIGQILSTITYFITAVAGISLFIAGVGVMNMMYISVSERTK 307
Query: 1051 EIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVGFTMILQRQLFTMLPIPMT 1110
EIG+ ALG + ++ ++ E +L ++ ++G +G M+ + +++ + ++
Sbjct: 308 EIGIRRALGATRKSIMLQFLLEGLILTISGGIIGYLLG------MVFAYGIGSLIKVHVS 361
Query: 1111 LP-WQLIIIVFICSMFFSFFSAFGPIRKVLNQPVVSIMR 1148
+ + +I+ V + S+ FS P + + ++ I+R
Sbjct: 362 VDLFTIILAVGVSSVIGLVFSVM-PASEAAKKDLIDILR 399
>gi|28208730|gb|AAO37412.1| ABC transporter-associated permease
[Clostridium tetani]
ref|NP_783744.1| ABC transporter-associated permease [Clostridium tetani]
Length = 817
Score = 48.9 bits (115), Expect = 9e-04
Identities = 42/151 (27%), Positives = 74/151 (48%), Gaps = 13/151 (8%)
Query: 1001 MLDYYEKIKPFATASVIIQYF-FSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALG 1059
+L YY++IK + I+ +SF + + I ++++++ +NI+ + E L A+G
Sbjct: 673 LLSYYKEIKYIKDSIKFIKILTYSFIACIVL-IGLLNIINTINTNIVLRMSEFATLKAIG 731
Query: 1060 IPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVGFTMILQRQLFTMLPIPMTLPWQLIIIV 1119
K+ + ++ ++E + SS+ GMF T G IL L IP P III
Sbjct: 732 FNKNHIRKVIMFEGLFYGILSSIFGMF---TSGVVCILLYNL-----IPNMKPGFSIIIF 783
Query: 1120 FICSMF---FSFFSAFGPIRKVLNQPVVSIM 1147
I +F S S+ P+RKV V++ +
Sbjct: 784 CIPELFIIIISLLSSIVPLRKVNKINVINTL 814
Score = 47.4 bits (111), Expect = 0.003
Identities = 39/157 (24%), Positives = 77/157 (48%), Gaps = 9/157 (5%)
Query: 979 AVESIKNRLNSFLIGNLREDFDMLDYYEKIKPFATASVIIQYFFSFTTVLAMTISFFSLM 1038
++E I+NR N N + F + IK + S I+ F ++A ++ +++
Sbjct: 228 SIEHIQNRFNI----NEDDIFINRGLMQVIK-HSNDSKILSIAFEMVVIIASILTIYNIF 282
Query: 1039 SSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVGFTMILQ 1098
+ +IL++TK+ G+L LG K ++ I + E +L + S +G+ IG + ++
Sbjct: 283 NM---SILDRTKDYGILRCLGFRKKKIMSIVLKEGLILSIISIPIGILIGCFLSKSIYFS 339
Query: 1099 -RQLFTMLPIPMTLPWQLIIIVFICSMFFSFFSAFGP 1134
++ +TL +I++VFI ++ SAF P
Sbjct: 340 IGKILNNTVKSLTLSIYVILLVFIITLLSVSISAFMP 376
>gi|23474714|ref|ZP_00130006.1| COG0577: ABC-type antimicrobial
peptide transport system, permease component
[Desulfovibrio desulfuricans G20]
Length = 410
Score = 48.9 bits (115), Expect = 9e-04
Identities = 31/136 (22%), Positives = 67/136 (48%), Gaps = 13/136 (9%)
Query: 1005 YEKIKPFATASVIIQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSW 1064
Y + A A++++ F L + + + ++Y+ ++ E L A+G P +
Sbjct: 278 YWMLSTGAGAALVVAAF------LGLVVGMVVVAQTLYATTMDHLPEFATLKAMGAPDGY 331
Query: 1065 MIRIYVYEAFVLVMASSMLGMFIGSTVGFTMILQRQLFTMLPIPMTLPWQLIIIVFICSM 1124
++RI + +A + S++LG +G +V ++ + + + LPWQL +F+ ++
Sbjct: 332 ILRILLVQALI----SAVLGYALGMSVCLVIVTAT---AVSDVSILLPWQLATGMFVMTL 384
Query: 1125 FFSFFSAFGPIRKVLN 1140
F ++ IRKVL+
Sbjct: 385 FMCVSASVISIRKVLH 400
>gi|20806779|ref|NP_621950.1| ABC-type transport systems, involved in
lipoprotein release, permease components
[Thermoanaerobacter tengcongensis MB4]
gb|AAM23554.1| ABC-type transport systems, involved in lipoprotein release, permease
components [Thermoanaerobacter tengcongensis MB4]
Length = 391
Score = 48.5 bits (114), Expect = 0.001
Identities = 40/180 (22%), Positives = 77/180 (42%), Gaps = 9/180 (5%)
Query: 972 LNTDDKDAVESIKNRLNSFLIGNLRED---FDMLDYYEKIKPFATASVIIQYFFSFTTVL 1028
+ + D VE KN +N+ L+ + D F ++D + + + + + +
Sbjct: 216 IGASNPDTVEIAKNMINNHLLEVFKGDTSAFTIIDQSQILSTVNSVTTTLSLLLGGIAGI 275
Query: 1029 AMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFIG 1088
++ + +M+ + ++ E+T+EIG+ ALG K ++ ++ E+ L S LG +G
Sbjct: 276 SLLVGGIGIMNIMLVSVTERTREIGIRKALGAKKRDILLQFIIESLTL----SGLGGILG 331
Query: 1089 STVGFTMILQRQLFTMLPIPMTLPWQLIIIVFICSMFFSFFSAFGPIRKVLNQPVVSIMR 1148
G+ IL L + I I+I F S+ F P K N + +R
Sbjct: 332 IIAGY--ILAVTLGKAMNIDANPTLSTILISFSFSVLVGLFFGVYPANKAANLNPIEALR 389
>gi|50843475|ref|YP_056702.1| ABC transporter associated permease
[Propionibacterium acnes KPA171202]
gb|AAT83744.1| ABC transporter associated permease [Propionibacterium acnes
KPA171202]
Length = 807
Score = 48.5 bits (114), Expect = 0.001
Identities = 26/112 (23%), Positives = 70/112 (62%), Gaps = 3/112 (2%)
Query: 1027 VLAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMF 1086
V+++ I+ + +++ +++E+T+EIG+L ALG+ ++ + ++ EA +L +++LG+
Sbjct: 685 VISVIIAIVGVANTLGLSVVERTREIGLLRALGLTRAQVRSMFGKEALMLSGIAAILGIA 744
Query: 1087 IGSTVGFTMILQRQLF-TMLPIPMTLPWQLIIIVFICSMFFSFFSAFGPIRK 1137
+G +G+ + LF +++ + ++PW ++IV + ++ + ++ P R+
Sbjct: 745 LG--IGYGIAGSHALFGSLMTVETSVPWLQLLIVALVAVLAGWLASVIPGRR 794
>gi|50841543|ref|YP_054770.1| ABC transporter associated permease
[Propionibacterium acnes KPA171202]
gb|AAT81812.1| ABC transporter associated permease [Propionibacterium acnes
KPA171202]
Length = 823
Score = 48.5 bits (114), Expect = 0.001
Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 21/181 (11%)
Query: 971 KLNTDDKDAVESIKNRLNSFLIGNLREDFDMLDYYEKIKPFATASVIIQYFFSFTTVLAM 1030
+ N DD A S + I +L EDFD+ Y + F ++++ TT L +
Sbjct: 214 QFNKDDAGATISTADSFQKKTINSLTEDFDVTKYMLMV--FGAIALLVGAIIITTTFLIL 271
Query: 1031 TISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFIGST 1090
+ ++ ++IG++ A+G + R + EA VL + SMLG+
Sbjct: 272 --------------LAQRRRQIGLMRAVGASSGQVRRRVLAEAIVLGVLGSMLGV----V 313
Query: 1091 VGFTMILQRQLFT-MLPIPMTLPWQLIIIVFICSMFFSFFSAFGPIRKVLNQPVVSIMRV 1149
+G + + +T L + PW II+ F+ + + +AF P + + +R
Sbjct: 314 LGILLTVAGTAYTGALAFGLAWPWGDIIVEFLIGIVITVLAAFLPALRATRVAPLEALRP 373
Query: 1150 V 1150
V
Sbjct: 374 V 374
>gi|28211463|ref|NP_782407.1| ABC transporter ATP-binding protein
[Clostridium tetani E88]
gb|AAO36344.1| ABC transporter ATP-binding protein [Clostridium tetani E88]
Length = 845
Score = 48.5 bits (114), Expect = 0.001
Identities = 33/190 (17%), Positives = 92/190 (48%), Gaps = 11/190 (5%)
Query: 965 MNQVIL------KLNTDDKDAVESIKNRLNSFLIGNLREDFDMLDYYEKIKPFATASVII 1018
MN+++L +++ DK A + + + +G+ R ++++ ++++ ++ + I
Sbjct: 658 MNKILLDQIQSAEIDLKDKGAGDEFQKWIQP--LGD-RFGIRVINHVQQMEEQKSSGLQI 714
Query: 1019 QYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVM 1078
+ V+ I ++++++ +N++ + KEI L A+G+ + R+ + E + +
Sbjct: 715 KILMYGFIVVVSLIGAVNIINTITTNLILRKKEIASLSAIGMTYKNIKRMILTEGILYGV 774
Query: 1079 ASSMLGMFIGSTVGFTMILQRQLFTMLPIPMTLPWQLIIIVFICSMFFSFFSAFGPIRKV 1138
S+ G+ +G+ + + M + ++ +PWQ I I S+F S P+ +
Sbjct: 775 YGSIYGVIVGTFLSYAMF--SNMTNIMKFKWPIPWQSICIAVGTSIFIGLISVIRPLNMI 832
Query: 1139 LNQPVVSIMR 1148
++ +++
Sbjct: 833 KKSNIIDVIK 842
>gi|42519858|ref|NP_965788.1| ABC transporter permease component
[Lactobacillus johnsonii NCC 533]
gb|AAS09754.1| ABC transporter permease component [Lactobacillus johnsonii NCC 533]
Length = 148
Score = 48.5 bits (114), Expect = 0.001
Identities = 30/98 (30%), Positives = 53/98 (53%), Gaps = 1/98 (1%)
Query: 1028 LAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFI 1087
+++ S + Y+++LE+TKEIGVL ALG K + R++ E F+L + S +LG+ I
Sbjct: 26 ISLVTSMIMIGILTYTSVLERTKEIGVLKALGARKRDITRVFDAETFILGLFSGILGILI 85
Query: 1088 GSTVGFTM-ILQRQLFTMLPIPMTLPWQLIIIVFICSM 1124
F + + + M + P Q +I+V I ++
Sbjct: 86 AYLCTFPINAVLYAITNMSNVAQLDPMQALILVIISTV 123
>gi|2879915|dbj|BAA24813.1| bacI [Enterococcus faecalis]
Length = 399
Score = 48.5 bits (114), Expect = 0.001
Identities = 34/159 (21%), Positives = 81/159 (50%), Gaps = 10/159 (6%)
Query: 993 GNLRE--DFDMLDYYEKIKPFATASVIIQYFFSFTTVLAMTISFFSLMSSVYSNILEQTK 1050
G+LR ++++LD K I YF + +++ I+ +M+ +Y ++ E+TK
Sbjct: 248 GSLRHLGEYEVLDTAMLTKGIGQILSTITYFITAVAGISLFIAGVGVMNMMYISVSERTK 307
Query: 1051 EIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVGFTMILQRQLFTMLPIPMT 1110
EIG+ ALG + ++ ++ E +L ++ ++G +G MI + +++ + ++
Sbjct: 308 EIGIRRALGATRKSIMLQFLLEGLILTISGGIIGYLLG------MIFAYGIGSLIKVHVS 361
Query: 1111 LP-WQLIIIVFICSMFFSFFSAFGPIRKVLNQPVVSIMR 1148
+ + +++ V + S+ FS P + + ++ I+R
Sbjct: 362 VDLFTILLAVGVSSVIGLVFSVM-PASEAAKKDLIDILR 399
>gi|9658205|gb|AAF96679.1| conserved hypothetical protein [Vibrio
cholerae O1 biovar eltor str. N16961]
ref|NP_233167.1| hypothetical protein VCA0781 [Vibrio cholerae O1 biovar eltor str.
N16961]
pir||G82417 conserved hypothetical protein VCA0781 [imported] - Vibrio cholerae
(strain N16961 serogroup O1)
Length = 815
Score = 48.1 bits (113), Expect = 0.002
Identities = 65/304 (21%), Positives = 123/304 (40%), Gaps = 36/304 (11%)
Query: 852 APDPDYSLNDIQYLSE--QIYSFTSGQKIIIGSLYTDVIGASIDQSFLLQLNIKSGEASS 909
A D Y L LS+ Q ++ + ++ + D +G I N+ G+A
Sbjct: 112 AVDSAYPLRGEMRLSDGQQTFNHVASNQLWLEPRVKDQLGVDIGD------NVTIGDADF 165
Query: 910 VNSTRHLVKPSAMLDSAXXXXXXXXXXVTNQDSIVSFPTYLSYASSIFSSVREIPMNQVI 969
V S L +P + P+ +AS + + P ++V
Sbjct: 166 VVSGEVLEEPGLSFNP-----------------FQQMPSVYIHASDVDKTGAIQPGSRVQ 208
Query: 970 LKL-NTDDKDAVESIKNRLNSFLIGNLREDFDMLDYYEKIKPFATASVIIQYFFSFTTVL 1028
L T D A+ESIK +++ R+ E + Q + S T +
Sbjct: 209 FSLFMTGDDSAIESIKQQVSLTASDRWRDQESGSRTNEVFER-------TQQYLSLTVAI 261
Query: 1029 AMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFIG 1088
+ ++ +L+ + + +T I +L +LG + W+ R + +L++ + +LG IG
Sbjct: 262 VILMAATTLVLTCQHYVSTRTHTIAMLKSLGASRRWLRRWLALQVGLLLVFAVVLGSVIG 321
Query: 1089 STVGFTMILQRQLFTMLPIPMTLPWQLIIIVFICSMFFSFFSAFG-PIRKVLNQPVVSIM 1147
VG +L+ L +LP P+ + + + S F A G P+ ++L+ V++M
Sbjct: 322 --VGLESLLRLPLKDLLPDPLPSYGLRPLWIALASSFLIAVPALGIPLGRLLSVSAVAVM 379
Query: 1148 RVVT 1151
+ VT
Sbjct: 380 QPVT 383
>gi|34557888|ref|NP_907703.1| INTEGRAL MEMBRANE PROTEIN-Permease
Component, involved in lipoprotein release [Wolinella
succinogenes DSM 1740]
emb|CAE10603.1| INTEGRAL MEMBRANE PROTEIN-Permease Component, involved in lipoprotein
release [Wolinella succinogenes]
Length = 381
Score = 48.1 bits (113), Expect = 0.002
Identities = 35/147 (23%), Positives = 75/147 (50%), Gaps = 23/147 (15%)
Query: 1006 EKIKPFATASVIIQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWM 1065
EKIK ++ +FT +L ++ + +SS+ I +TKEI +L A+G ++ +
Sbjct: 252 EKIK-------LLMALVAFTVLLITSMCVNTTLSSI---IFARTKEIALLRAMGASRAEV 301
Query: 1066 IRIYVYEAFVLVMASS----MLGMFIGSTVGFTMILQRQLFTMLPIPMTLPWQLIIIVFI 1121
++++ E ++ +++S +LG+ + +G + F L IP+ +
Sbjct: 302 VKLFGSETLIMTLSASLAGALLGILLAQWLGLAIFGSGIDFRFLSIPLAIG--------- 352
Query: 1122 CSMFFSFFSAFGPIRKVLNQPVVSIMR 1148
S+ F+ +A+ PI++ L+ V +I+R
Sbjct: 353 ISLLFAALAAYYPIKRTLHLGVANILR 379
>gi|21228993|ref|NP_634915.1| ABC transporter, permease protein
[Methanosarcina mazei Go1]
gb|AAM32587.1| ABC transporter, permease protein [Methanosarcina mazei Goe1]
Length = 275
Score = 48.1 bits (113), Expect = 0.002
Identities = 28/153 (18%), Positives = 72/153 (46%)
Query: 996 REDFDMLDYYEKIKPFATASVIIQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVL 1055
++DF + E I+ + F +F +++ + + +++++++LE+TKEIG++
Sbjct: 121 KQDFYVSSSKETIESTQKLINGLTSFLAFIAGISLLVGSTGIANTMFTSVLEKTKEIGIM 180
Query: 1056 CALGIPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVGFTMILQRQLFTMLPIPMTLPWQL 1115
A+G S ++ I++ A ++ + M+G+ +G+ ++ + +P L +
Sbjct: 181 KAIGAKNSDIMMIFLCNAAMISLVGGMIGILLGTAAVQLILFFISVKMNVPFEFALSLKG 240
Query: 1116 IIIVFICSMFFSFFSAFGPIRKVLNQPVVSIMR 1148
+I + S+ + P + V +R
Sbjct: 241 TVIATLVSIAVGLIAGLVPAKNASELKPVDALR 273
>gi|21228952|ref|NP_634874.1| ABC transporter, permease protein
[Methanosarcina mazei Go1]
gb|AAM32546.1| ABC transporter, permease protein [Methanosarcina mazei Goe1]
Length = 405
Score = 48.1 bits (113), Expect = 0.002
Identities = 34/135 (25%), Positives = 73/135 (53%), Gaps = 18/135 (13%)
Query: 1013 TASVIIQYFFSFTTVLAMTISFFSLMSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYE 1072
T V + F+ +L I+ F + +++ + + ++T+EIG+L A+G + ++ I++++
Sbjct: 266 TQMVFVNIFY----LLIYGIAGFGIANTLITIVAQRTREIGILKAMGASQKSIMVIFIFQ 321
Query: 1073 AFVLVMASSMLGMFIGSTVGFTMILQRQLFTM-LPIPM-----TLPWQLIIIVFICSMFF 1126
+ VL +G+ +G+ +G+ I+ Q + + +P M TLP ++ + F+ + FF
Sbjct: 322 SLVL----GAIGLVLGTVLGYITIVALQNYKIEVPQEMYFGLQTLPLEVEALNFVYAAFF 377
Query: 1127 SF----FSAFGPIRK 1137
+F S P RK
Sbjct: 378 AFIVNILSGIYPARK 392
>gi|1787105|gb|AAC73966.1| macrolide-specific ABC-type efflux carrier;
macrolide transport protein (ABC superfamily, atp_bind
(N-terminal), membrane (C-terminal)) [Escherichia coli
K12]
dbj|BAA35598.1| ABC transporter probable ATP-binding subunit homolog [Escherichia
coli K12]
pir||G64826 probable ABC transporter ybjZ - Escherichia coli (strain K-12)
dbj|BAB64542.1| macrolide-specific ABC-type efflux carrier [Escherichia coli]
ref|NP_415400.1| macrolide transport protein (ABC superfamily, atp_bind (N-terminal),
membrane (C-terminal)) [Escherichia coli K12]
sp|P75831|MACB_ECOLI Macrolide-specific ABC-type efflux carrier
Length = 648
Score = 48.1 bits (113), Expect = 0.002
Identities = 37/178 (20%), Positives = 83/178 (45%), Gaps = 18/178 (10%)
Query: 978 DAVESIKNRLNSFLIGNLREDFDMLDYYEKIKPFATASVIIQYFFSFTTVLAMTISFFSL 1037
D+ E+ + + + ++DF + +K + +Q F + V+++ + +
Sbjct: 481 DSAEAEQQLTRLLSLRHGKKDFFTWNMDGVLKTVEKTTRTLQLFLTLVAVISLVVGGIGV 540
Query: 1038 MSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVGFTMIL 1097
M+ + ++ E+T+EIG+ A+G S +++ ++ EA ++ + LG+ + + FT+
Sbjct: 541 MNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFTL-- 598
Query: 1098 QRQLFTMLPIPMTLPWQL------IIIVFICSMFFSFFSAFGPIRKVLN-QPVVSIMR 1148
QLF LP W++ +++ F+CS + P R PV ++ R
Sbjct: 599 --QLF--LP-----GWEIGFSPLALLLAFLCSTVTGILFGWLPARNAARLDPVDALAR 647
>gi|12513909|gb|AAG55261.1| putative ATP-binding component of a
transport system [Escherichia coli O157:H7 EDL933]
pir||A85600 hypothetical protein ybjZ [imported] - Escherichia coli (strain
O157:H7, substrain EDL933)
ref|NP_286651.1| putative ATP-binding component of a transport system [Escherichia
coli O157:H7 EDL933]
Length = 648
Score = 48.1 bits (113), Expect = 0.002
Identities = 37/178 (20%), Positives = 83/178 (45%), Gaps = 18/178 (10%)
Query: 978 DAVESIKNRLNSFLIGNLREDFDMLDYYEKIKPFATASVIIQYFFSFTTVLAMTISFFSL 1037
D+ E+ + + + ++DF + +K + +Q F + V+++ + +
Sbjct: 481 DSAEAEQQLTRLLSLRHGKKDFFTWNMDGVLKTVEKTTRTLQLFMTLVAVISLVVGGIGV 540
Query: 1038 MSSVYSNILEQTKEIGVLCALGIPKSWMIRIYVYEAFVLVMASSMLGMFIGSTVGFTMIL 1097
M+ + ++ E+T+EIG+ A+G S +++ ++ EA ++ + LG+ + + FT+
Sbjct: 541 MNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFTL-- 598
Query: 1098 QRQLFTMLPIPMTLPWQL------IIIVFICSMFFSFFSAFGPIRKVLN-QPVVSIMR 1148
QLF LP W++ +++ F+CS + P R PV ++ R
Sbjct: 599 --QLF--LP-----GWEIGFSPLALLLAFLCSTVTGILFGWLPARNAARLDPVDALAR 647
>gi|53798558|ref|ZP_00358981.1| COG0577: ABC-type antimicrobial
peptide transport system, permease component
[Chloroflexus aurantiacus]
Length = 414
Score = 48.1 bits (113), Expect = 0.002
Identities = 40/192 (20%), Positives = 85/192 (43%), Gaps = 10/192 (5%)
Query: 961 REIPMNQVILKLNTDDK--DAVESIKNRLNSF--LIGNLREDFDMLDYYEKIKPFATASV