Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DDB0169085
(423 letters)
Database: /home/dicty1/resource/WorkingDBs//nr-clean
2,329,665 sequences; 788,375,511 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|55818941|ref|YP_142414.1| unknown [Acanthomoeba polyphaga mim... 127 5e-28
gi|1513302|gb|AAB06791.1| CigB >gi|2498237|sp|Q94481|CIGB_DICDI ... 106 1e-21
gi|55819289|ref|YP_142768.1| unknown [Acanthomoeba polyphaga mim... 98 4e-19
gi|55819042|ref|YP_142516.1| unknown [Acanthomoeba polyphaga mim... 65 4e-09
gi|55819050|ref|YP_142524.1| unknown [Acanthomoeba polyphaga mim... 65 5e-09
gi|55819159|ref|YP_142635.1| unknown [Acanthomoeba polyphaga mim... 63 2e-08
gi|55819503|ref|YP_142990.1| unknown [Acanthomoeba polyphaga mim... 62 3e-08
gi|4049775|gb|AAC97735.1| ORF MSV261 leucine rich repeat gene fa... 59 2e-07
gi|55819164|ref|YP_142640.1| unknown [Acanthomoeba polyphaga mim... 45 0.005
gi|51597601|ref|YP_071792.1| putative antigenic leucine-rich rep... 44 0.007
gi|45478559|ref|NP_995386.1| putative targeted effector protein ... 41 0.073
gi|16419306|gb|AAL19737.1| leucine-rich repeat protein [Salmonel... 40 0.096
gi|50948145|ref|XP_483600.1| putative NBS-LRR resistance protein... 40 0.13
gi|46226440|gb|EAK87440.1| hypothetical protein cgd4_3980 [Crypt... 40 0.13
gi|55819290|ref|YP_142769.1| unknown [Acanthomoeba polyphaga mim... 40 0.13
gi|21281267|gb|AAM44951.1| putative receptor protein kinase [Ara... 39 0.21
gi|7270372|emb|CAB80139.1| receptor protein kinase-like protein ... 39 0.21
gi|15553678|gb|AAL01986.1| I2C-5 [Lycopersicon pimpinellifolium] 39 0.28
gi|57111891|ref|XP_548863.1| PREDICTED: similar to Toll-like rec... 39 0.36
gi|38505593|ref|NP_942214.1| hypothetical protein [Synechocystis... 39 0.36
gi|4049769|gb|AAC97729.1| ORF MSV253 leucine rich repeat gene fa... 39 0.36
gi|18875360|ref|NP_573474.1| toll-like receptor 7 [Mus musculus]... 38 0.48
gi|20088916|ref|NP_614991.1| dynein heavy chain [Methanosarcina ... 38 0.48
gi|4049760|gb|AAC97720.1| ORF MSV241 leucine rich repeat gene fa... 38 0.48
gi|51597602|ref|YP_071793.1| putative antigenic leucine-rich rep... 38 0.62
gi|34879918|ref|XP_228909.2| similar to toll-like receptor 7 [Ra... 37 0.81
gi|46437283|gb|EAK96632.1| hypothetical protein CaO19.9498 [Cand... 37 0.81
gi|16975343|pdb|1JL5|A Chain A, Novel Molecular Architecture Of ... 37 0.81
>gi|55818941|ref|YP_142414.1| unknown [Acanthomoeba polyphaga
mimivirus]
gb|AAV50335.1| unknown [Acanthomoeba polyphaga mimivirus]
Length = 621
Score = 127 bits (320), Expect = 5e-28
Identities = 104/334 (31%), Positives = 160/334 (47%), Gaps = 76/334 (22%)
Query: 135 LPESLTKLTLSLFNQPIG----------KDSFNVLKN-------LKCLVLE-NFNHDINP 176
+PE++ L L NQ +G K +N+L N L LV + NFN IN
Sbjct: 159 IPENIRHLELICNNQSLGVIIPRNVKYLKIGYNILLNETTLPYGLTHLVFDYNFNGKIN- 217
Query: 177 NDLPSSLVEL-YLVKFNKPLQLNSIPNSIEWLML-SDFDQPLKPNLLPSSLIDLSL-FEY 233
+P ++ L + KFN+PL+++ IP+++ +L +DF+QP+ ++PSS+ L + +
Sbjct: 218 GFIPETVTHLEFGNKFNQPLEIDDIPSNVVYLKFGTDFNQPITSKVIPSSVKHLEFGYYF 277
Query: 234 NQPLYAGDLPNGITYLSLGC-YNQQLGSDIIPSSV----------------------THL 270
NQP+ G LP G+ L+L C +NQ L +IP +V THL
Sbjct: 278 NQPINRGVLPQGLISLTLSCKFNQILEPGVIPDTVKILNIYPSNVCPISIGVIPSRLTHL 337
Query: 271 TLSK-----------------------YDHSLKKGDIPSSVQFLKM-NDFNSDIEIGAIP 306
+ + Y+H +K G IP SV L+ +++N +EIG IP
Sbjct: 338 NIVQELNQILDQTILPETLTYLRIPHCYNHPIKPGIIPLSVTELEFGSNYNQVLEIGTIP 397
Query: 307 LSVKKLTLHS-FNQPIKPGAISFGVEKIRFLSSFNKPLIQGSFPSSVKTIHFSINFNQKI 365
+V +T + FNQP+ G I V+KIRF FN+ L G P V ++ FNQ +
Sbjct: 398 PNVNSVTFGTKFNQPLSKGVIPNSVKKIRFGFEFNQLLKVGDIPYGVTHLYLGNRFNQPL 457
Query: 366 KPNDIPESCIKIKMGYCFNH------LPKLTSNI 393
+ IPES + +GYCF +P +NI
Sbjct: 458 EIGVIPESVTHLDLGYCFKQPLEIGMIPSSVTNI 491
Score = 105 bits (262), Expect = 2e-21
Identities = 85/267 (31%), Positives = 134/267 (49%), Gaps = 11/267 (4%)
Query: 126 YDQIIKPMVLPESLTKLTLSL-FNQPIGKDSFNVLKNLKCLVLE-NFNHDINPNDLPSSL 183
++Q I V+P S+ L FNQPI + + L L L FN + P +P ++
Sbjct: 255 FNQPITSKVIPSSVKHLEFGYYFNQPINRGVLP--QGLISLTLSCKFNQILEPGVIPDTV 312
Query: 184 VELYLVKFNK-PLQLNSIPNSIEWL-MLSDFDQPLKPNLLPSSLIDLSLFE-YNQPLYAG 240
L + N P+ + IP+ + L ++ + +Q L +LP +L L + YN P+ G
Sbjct: 313 KILNIYPSNVCPISIGVIPSRLTHLNIVQELNQILDQTILPETLTYLRIPHCYNHPIKPG 372
Query: 241 DLPNGITYLSLGC-YNQQLGSDIIPSSVTHLTL-SKYDHSLKKGDIPSSVQFLKMN-DFN 297
+P +T L G YNQ L IP +V +T +K++ L KG IP+SV+ ++ +FN
Sbjct: 373 IIPLSVTELEFGSNYNQVLEIGTIPPNVNSVTFGTKFNQPLSKGVIPNSVKKIRFGFEFN 432
Query: 298 SDIEIGAIPLSVKKLTL-HSFNQPIKPGAISFGVEKIRFLSSFNKPLIQGSFPSSVKTIH 356
+++G IP V L L + FNQP++ G I V + F +PL G PSSV I
Sbjct: 433 QLLKVGDIPYGVTHLYLGNRFNQPLEIGVIPESVTHLDLGYCFKQPLEIGMIPSSVTNIK 492
Query: 357 FSINFNQKIKPNDIPESCIKIKMGYCF 383
FS+ + IK IP+ + + Y +
Sbjct: 493 FSMYYYLPIKRGVIPDRVKHLNLNYIY 519
Score = 104 bits (259), Expect = 5e-21
Identities = 89/302 (29%), Positives = 151/302 (49%), Gaps = 32/302 (10%)
Query: 125 KYDQIIKPMVLPESLTKLT--------LSLFNQPIGKDSFNVLKNLKCLVLEN------- 169
K++QI++P V+P+++ L +S+ P N+++ L ++ +
Sbjct: 298 KFNQILEPGVIPDTVKILNIYPSNVCPISIGVIPSRLTHLNIVQELNQILDQTILPETLT 357
Query: 170 -------FNHDINPNDLPSSLVEL-YLVKFNKPLQLNSIPNSIEWLML-SDFDQPLKPNL 220
+NH I P +P S+ EL + +N+ L++ +IP ++ + + F+QPL +
Sbjct: 358 YLRIPHCYNHPIKPGIIPLSVTELEFGSNYNQVLEIGTIPPNVNSVTFGTKFNQPLSKGV 417
Query: 221 LPSSLIDLSL-FEYNQPLYAGDLPNGITYLSLG-CYNQQLGSDIIPSSVTHLTLSK-YDH 277
+P+S+ + FE+NQ L GD+P G+T+L LG +NQ L +IP SVTHL L +
Sbjct: 418 IPNSVKKIRFGFEFNQLLKVGDIPYGVTHLYLGNRFNQPLEIGVIPESVTHLDLGYCFKQ 477
Query: 278 SLKKGDIPSSVQFLKMN-DFNSDIEIGAIPLSVKKLTLHSFNQPIKPGAISFGVEKIRFL 336
L+ G IPSSV +K + + I+ G IP VK L L+ P I V ++F
Sbjct: 478 PLEIGMIPSSVTNIKFSMYYYLPIKRGVIPDRVKHLNLNYIYTGCDPDFIPKSVTHLQFD 537
Query: 337 SSFNKPLIQGSFPSSVKTIHFSINFNQKIKPNDIPESCIKIKMGYCFNHLPKLTSNIFSN 396
+N LI P SV + S + I P IP S K+ + +++ ++T +I
Sbjct: 538 LGYNFRLIDFKIPESVIDLEISRAY-YPIGPKIIPNSVQKLSI---WDYKGEVTDDIVGK 593
Query: 397 NL 398
N+
Sbjct: 594 NV 595
Score = 102 bits (255), Expect = 2e-20
Identities = 89/298 (29%), Positives = 146/298 (48%), Gaps = 33/298 (11%)
Query: 126 YDQIIKPMVLPESLTKLTLSL-FNQPIGKDSFNVLKNLKCLVLENFNH-DINPNDLPSSL 183
++Q I VLP+ L LTLS FNQ + + + +K L + N I+ +PS L
Sbjct: 277 FNQPINRGVLPQGLISLTLSCKFNQIL--EPGVIPDTVKILNIYPSNVCPISIGVIPSRL 334
Query: 184 VELYLVK-FNKPLQLNSIPNSIEWLMLSD-FDQPLKPNLLPSSLIDLSL-FEYNQPLYAG 240
L +V+ N+ L +P ++ +L + ++ P+KP ++P S+ +L YNQ L G
Sbjct: 335 THLNIVQELNQILDQTILPETLTYLRIPHCYNHPIKPGIIPLSVTELEFGSNYNQVLEIG 394
Query: 241 DLPNGITYLSLGC-YNQQLGSDIIPSSVTHLTLS-KYDHSLKKGDIPSSVQFLKM-NDFN 297
+P + ++ G +NQ L +IP+SV + +++ LK GDIP V L + N FN
Sbjct: 395 TIPPNVNSVTFGTKFNQPLSKGVIPNSVKKIRFGFEFNQLLKVGDIPYGVTHLYLGNRFN 454
Query: 298 SDIEIGAIPLSVKKLTL-HSFNQPIKPGAISFGVEKIRFLSSFNKPLIQGSFPSSVKTIH 356
+EIG IP SV L L + F QP++ G I V I+F + P+ +G P VK ++
Sbjct: 455 QPLEIGVIPESVTHLDLGYCFKQPLEIGMIPSSVTNIKFSMYYYLPIKRGVIPDRVKHLN 514
Query: 357 ---------------------FSINFNQKIKPNDIPESCIKIKMGYCFNHL-PKLTSN 392
F + +N ++ IPES I +++ + + PK+ N
Sbjct: 515 LNYIYTGCDPDFIPKSVTHLQFDLGYNFRLIDFKIPESVIDLEISRAYYPIGPKIIPN 572
Score = 96.3 bits (238), Expect = 1e-18
Identities = 73/224 (32%), Positives = 117/224 (51%), Gaps = 11/224 (4%)
Query: 170 FNHDINPN---DLPSSLVELYLVK-FNKPLQLNSIPNSIEWLMLSD-FDQPLKPNLLPSS 224
FN + N N +P S+ L K F KPL+ +IP +E ++ +++ + ++P S
Sbjct: 83 FNDEFNDNVDGRIPCSVKCLTFGKSFKKPLKPGTIPFGVEKIIFKSWYNKSISGGIIPGS 142
Query: 225 LIDLSLFEYNQPLYAGDLPNGITYLSLGCYNQQLGSDIIPSSVTHLTLSKYDHSLKKGDI 284
+I L F+ ++ L GD+P I +L L C NQ LG IIP +V +L + Y+ L + +
Sbjct: 143 VIHLE-FKTSRKLSKGDIPENIRHLELICNNQSLGV-IIPRNVKYLKIG-YNILLNETTL 199
Query: 285 PSSVQFLKMN-DFNSDIEIGAIPLSVKKLTL-HSFNQPIKPGAISFGVEKIRFLSSFNKP 342
P + L + +FN I G IP +V L + FNQP++ I V ++F + FN+P
Sbjct: 200 PYGLTHLVFDYNFNGKIN-GFIPETVTHLEFGNKFNQPLEIDDIPSNVVYLKFGTDFNQP 258
Query: 343 LIQGSFPSSVKTIHFSINFNQKIKPNDIPESCIKIKMGYCFNHL 386
+ PSSVK + F FNQ I +P+ I + + FN +
Sbjct: 259 ITSKVIPSSVKHLEFGYYFNQPINRGVLPQGLISLTLSCKFNQI 302
Score = 73.2 bits (178), Expect = 1e-11
Identities = 44/102 (43%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Query: 274 KYDHSLKKGDIPSSVQFLKMND-FNSDIEIGAIPLSVKKLTL-HSFNQPIKPGAISFGVE 331
K ++ +IP+ + L ND FN +++ G IP SVK LT SF +P+KPG I FGVE
Sbjct: 64 KIEYYASTNNIPNGITHLVFNDEFNDNVD-GRIPCSVKCLTFGKSFKKPLKPGTIPFGVE 122
Query: 332 KIRFLSSFNKPLIQGSFPSSVKTIHFSINFNQKIKPNDIPES 373
KI F S +NK + G P SV IH ++K+ DIPE+
Sbjct: 123 KIIFKSWYNKSISGGIIPGSV--IHLEFKTSRKLSKGDIPEN 162
Score = 72.0 bits (175), Expect = 3e-11
Identities = 63/233 (27%), Positives = 110/233 (47%), Gaps = 29/233 (12%)
Query: 126 YDQIIKPMVLPESLTKLTLSL-FNQPIGKDSF-NVLKNLKCLVLENFNHDINPNDLPSSL 183
Y+Q+++ +P ++ +T FNQP+ K N +K ++ FN + D+P +
Sbjct: 387 YNQVLEIGTIPPNVNSVTFGTKFNQPLSKGVIPNSVKKIRFGF--EFNQLLKVGDIPYGV 444
Query: 184 VELYLV-KFNKPLQLNSIPNSIEWLMLSD-FDQPLKPNLLPSSLIDLSL-FEYNQPLYAG 240
LYL +FN+PL++ IP S+ L L F QPL+ ++PSS+ ++ Y P+ G
Sbjct: 445 THLYLGNRFNQPLEIGVIPESVTHLDLGYCFKQPLEIGMIPSSVTNIKFSMYYYLPIKRG 504
Query: 241 DLPNGITYLSL-----GC-----------------YNQQLGSDIIPSSVTHLTLSKYDHS 278
+P+ + +L+L GC YN +L IP SV L +S+ +
Sbjct: 505 VIPDRVKHLNLNYIYTGCDPDFIPKSVTHLQFDLGYNFRLIDFKIPESVIDLEISRAYYP 564
Query: 279 LKKGDIPSSVQFLKMNDFNSDIEIGAIPLSVKKLTLHSFNQPIKPGAISFGVE 331
+ IP+SVQ L + D+ ++ + +V L + N + G+E
Sbjct: 565 IGPKIIPNSVQKLSIWDYKGEVTDDIVGKNVVCLRVSPLNYRGYEKYLDLGIE 617
Score = 38.1 bits (87), Expect = 0.48
Identities = 38/156 (24%), Positives = 71/156 (45%), Gaps = 5/156 (3%)
Query: 125 KYDQIIKPMVLPESLTKLTLSL-FNQPIGKDSF-NVLKNLKCLVLENFNHDINPNDLPSS 182
+++Q ++ V+PES+T L L F QP+ + + N+K + + I +P
Sbjct: 452 RFNQPLEIGVIPESVTHLDLGYCFKQPLEIGMIPSSVTNIKFSMY--YYLPIKRGVIPDR 509
Query: 183 LVELYLVKFNKPLQLNSIPNSIEWLMLS-DFDQPLKPNLLPSSLIDLSLFEYNQPLYAGD 241
+ L L + IP S+ L ++ L +P S+IDL + P+
Sbjct: 510 VKHLNLNYIYTGCDPDFIPKSVTHLQFDLGYNFRLIDFKIPESVIDLEISRAYYPIGPKI 569
Query: 242 LPNGITYLSLGCYNQQLGSDIIPSSVTHLTLSKYDH 277
+PN + LS+ Y ++ DI+ +V L +S ++
Sbjct: 570 IPNSVQKLSIWDYKGEVTDDIVGKNVVCLRVSPLNY 605
>gi|1513302|gb|AAB06791.1| CigB
sp|Q94481|CIGB_DICDI Protein cigB
Length = 735
Score = 106 bits (265), Expect = 1e-21
Identities = 84/286 (29%), Positives = 139/286 (48%), Gaps = 34/286 (11%)
Query: 153 KDSFNVLKNLK-----CLVLENFNHDINPNDLPSSLVELYLVKFNKPLQLNSIPNSIE-- 205
KD+ N+L LK L+L FN + +P + LY+ + L ++SIPN++
Sbjct: 309 KDNCNILSKLKKLPNNVLLLSGFNQKLTKGIIPEGVKVLYIGDIKQELIIDSIPNTVTTV 368
Query: 206 --W------------------LMLSDFDQPLKPNLLPSSLIDLSLFE-YNQPLYAGDLPN 244
W L L D Q L + +PS+L + L + +NQ L G +P
Sbjct: 369 GLWYGFNQKLTKGIIPEGVKELRLGDIKQELIIDSIPSTLTTVILCDGFNQKLTKGIIPE 428
Query: 245 GITYLSLGCYNQQLGSDIIPSSVTHL-TLSKYDHSLKKGDIPSSVQFLKMNDFNSDIEIG 303
G+ L +G Q+L D IP++VT + L ++ L KG IP SV+ L + + ++ I
Sbjct: 429 GVKVLYIGDIKQELIIDSIPNTVTRVRLLDGFNQKLTKGIIPESVKELHIGNIKQELIID 488
Query: 304 AIPLSVKKLTL-HSFNQPIKPGAISFGVEKIRFLSSFNKPLIQGSFPSSVKTIHFSINFN 362
+IP +V +TL FNQ + G I GV+++ ++ + + LI S P++V T+ FN
Sbjct: 489 SIPNTVTTITLCDGFNQKLTKGIIPEGVKEL-YIGNLKQELIIDSIPNTVTTVRLCDGFN 547
Query: 363 QKIKPNDIPESCIKIKMGYCFNHLPKLTSNIFSNNLKKIIVDRNYN 408
QK+ IPE +K Y + +L + N + +I+ +N
Sbjct: 548 QKLTKGIIPEG---VKELYIRDIKQELIIDSIPNTVTTVILCDGFN 590
Score = 102 bits (253), Expect = 3e-20
Identities = 78/279 (27%), Positives = 136/279 (47%), Gaps = 12/279 (4%)
Query: 126 YDQIIKPMVLPESLTKLTLSLFNQPIGKDSF-NVLKNLKCLVLENFNHDINPNDLPSSLV 184
++Q + ++PES+ +L + Q + DS N + + + + FN + +P +
Sbjct: 460 FNQKLTKGIIPESVKELHIGNIKQELIIDSIPNTVTTIT--LCDGFNQKLTKGIIPEGVK 517
Query: 185 ELYLVKFNKPLQLNSIPNSIEWLMLSD-FDQPLKPNLLPSSLIDLSLFEYNQPLYAGDLP 243
ELY+ + L ++SIPN++ + L D F+Q L ++P + +L + + Q L +P
Sbjct: 518 ELYIGNLKQELIIDSIPNTVTTVRLCDGFNQKLTKGIIPEGVKELYIRDIKQELIIDSIP 577
Query: 244 NGITYLSLGC--YNQQLGSDIIPSSVTHLTLSKYDHSLKKGDIPSSVQFLKMND-FNSDI 300
N +T + L C +NQ+L IIP V L L L IP++V +++ D FN +
Sbjct: 578 NTVTTVIL-CDGFNQKLTKGIIPEWVKGLCLGDIKQELIIDSIPNTVTTVRLLDGFNQKL 636
Query: 301 EIGAIPLSVKKLTLHSFNQPIKPGAISFGVEKIRFLSSFNKPLIQGSFPSSVKTIHFSIN 360
G IP SVK+L + Q + +I V +R L FN+ L +G P VK +H +
Sbjct: 637 TKGIIPESVKELYIDDIKQELIIDSIPNTVTTVRLLDGFNQKLTKGIIPEWVKELHIG-D 695
Query: 361 FNQKIKPNDIPESCIKIKMGYCFNHLPKLTSNIFSNNLK 399
Q++ + IP + + Y + KL + N+K
Sbjct: 696 IKQELIIDSIPNTLNNV---YIYKSCKKLIYSFVPVNVK 731
Score = 100 bits (250), Expect = 6e-20
Identities = 78/280 (27%), Positives = 137/280 (48%), Gaps = 9/280 (3%)
Query: 126 YDQIIKPMVLPESLTKLTLSLFNQPIGKDSF-NVLKNLKCLVLENFNHDINPNDLPSSLV 184
++Q + ++PE + L + Q + DS N + ++ +L+ FN + +P S+
Sbjct: 417 FNQKLTKGIIPEGVKVLYIGDIKQELIIDSIPNTVTRVR--LLDGFNQKLTKGIIPESVK 474
Query: 185 ELYLVKFNKPLQLNSIPNSIEWLMLSD-FDQPLKPNLLPSSLIDLSLFEYNQPLYAGDLP 243
EL++ + L ++SIPN++ + L D F+Q L ++P + +L + Q L +P
Sbjct: 475 ELHIGNIKQELIIDSIPNTVTTITLCDGFNQKLTKGIIPEGVKELYIGNLKQELIIDSIP 534
Query: 244 NGITYLSL-GCYNQQLGSDIIPSSVTHLTLSKYDHSLKKGDIPSSVQFLKMND-FNSDIE 301
N +T + L +NQ+L IIP V L + L IP++V + + D FN +
Sbjct: 535 NTVTTVRLCDGFNQKLTKGIIPEGVKELYIRDIKQELIIDSIPNTVTTVILCDGFNQKLT 594
Query: 302 IGAIPLSVKKLTLHSFNQPIKPGAISFGVEKIRFLSSFNKPLIQGSFPSSVKTIHFSINF 361
G IP VK L L Q + +I V +R L FN+ L +G P SVK ++ +
Sbjct: 595 KGIIPEWVKGLCLGDIKQELIIDSIPNTVTTVRLLDGFNQKLTKGIIPESVKELYID-DI 653
Query: 362 NQKIKPNDIPESCIKIKMGYCFNHLPKLTSNIFSNNLKKI 401
Q++ + IP + +++ FN KLT I +K++
Sbjct: 654 KQELIIDSIPNTVTTVRLLDGFNQ--KLTKGIIPEWVKEL 691
Score = 51.6 bits (122), Expect = 4e-05
Identities = 40/162 (24%), Positives = 85/162 (51%), Gaps = 5/162 (3%)
Query: 135 LPESLTKLTL-SLFNQPIGKDSFNVLKNLKCLVLENFNHDINPNDLPSSLVELYLVK-FN 192
+P ++T + L FNQ + K + + +K L L + ++ + +P+++ + L+ FN
Sbjct: 576 IPNTVTTVILCDGFNQKLTKGI--IPEWVKGLCLGDIKQELIIDSIPNTVTTVRLLDGFN 633
Query: 193 KPLQLNSIPNSIEWLMLSDFDQPLKPNLLPSSLIDLSLFE-YNQPLYAGDLPNGITYLSL 251
+ L IP S++ L + D Q L + +P+++ + L + +NQ L G +P + L +
Sbjct: 634 QKLTKGIIPESVKELYIDDIKQELIIDSIPNTVTTVRLLDGFNQKLTKGIIPEWVKELHI 693
Query: 252 GCYNQQLGSDIIPSSVTHLTLSKYDHSLKKGDIPSSVQFLKM 293
G Q+L D IP+++ ++ + K L +P +V+ + +
Sbjct: 694 GDIKQELIIDSIPNTLNNVYIYKSCKKLIYSFVPVNVKIVNI 735
>gi|55819289|ref|YP_142768.1| unknown [Acanthomoeba polyphaga
mimivirus]
gb|AAV50683.1| unknown [Acanthomoeba polyphaga mimivirus]
Length = 516
Score = 98.2 bits (243), Expect = 4e-19
Identities = 97/333 (29%), Positives = 159/333 (47%), Gaps = 66/333 (19%)
Query: 126 YDQIIKPMVLPESLTKLTLSL-FNQPIGKDSF---------NVLKNLKCLVLENFNHDIN 175
++Q IK V+P ++ L+L FNQPI ++ + + K++K E N + +
Sbjct: 188 FNQSIKN-VIPHNVKYLSLMYSFNQPISEEIYIDDTLKTISYIPKSVKYFDYETSNDEFD 246
Query: 176 PNDLPSSLVELYLVKFNKPLQLNSIPNSIEWLMLSDFDQPLKPNLLPSSLIDLSL----- 230
L ++ L ++ NK + IP+S+ L L ++ ++P +P ++ LS
Sbjct: 247 FKILSENITYLNII-INKHIYPGDIPSSVTRLGLLS-NEDVRPEAIPDNVTHLSFDLYYF 304
Query: 231 --FEYNQPLYA-------GDL-------PNGITYLSLGCYNQQ-LGSDIIPSSVTHLTLS 273
+ NQ ++ GDL PNG+T+L+ YN + L + IP+SVTHLT++
Sbjct: 305 GNYSLNQLIHKNITHLNLGDLSVSCDRIPNGVTHLT---YNPKYLTKNSIPNSVTHLTIN 361
Query: 274 K----------------------YDHSLKKGDIPSSVQFLKM-NDFNSDIEIGAIPLSVK 310
YD+ + KGDIP +V+ L N+F+ IE GAIP SV
Sbjct: 362 NKIKGSIDRCIPNSVVYLNFNGTYDNIIYKGDIPDNVRCLIFGNNFDQYIEEGAIPNSVV 421
Query: 311 KLTLHS-FNQPIKPGAISFGVEKIRFLSSFNKPLIQGSFPSSVKTIHFSINFNQKIKPND 369
L +N+P+ I V+ + F FNKP I+ + P++ I F FNQ +K N
Sbjct: 422 CLNFGKLYNKPVN-NVIPNNVKNLTFGYEFNKP-IENAIPNNTNHIEFGYMFNQSLK-NS 478
Query: 370 IPESCIKIKMGYCFNHLPKLTSNIFSNNLKKII 402
IP+S ++ Y + K+ F NN+ K +
Sbjct: 479 IPDSVTRLVFNYGLKSIYKINKK-FMNNIPKTV 510
Score = 82.4 bits (202), Expect = 2e-14
Identities = 82/338 (24%), Positives = 151/338 (44%), Gaps = 64/338 (18%)
Query: 126 YDQIIKPMVLPESLTKLTLSLFNQPIGKDSF-NVLKNLKCLVLENFNHDINPNDLPSSLV 184
++ +K +PE++T LT++ + + K S N + +L + ENFN I+ +P+S+V
Sbjct: 123 FNHTLKKGHIPETVTHLTINNGFRHMEKGSIPNSVTHL--IFGENFNKMIDVGVIPNSVV 180
Query: 185 ELYLVK-FNKPLQLNSIPNSIEWLMLS-DFDQPLKPNLLPSSLI--------DLSLFEY- 233
L + FN+ ++ N IP+++++L L F+QP+ + + + F+Y
Sbjct: 181 YLKFGRVFNQSIK-NVIPHNVKYLSLMYSFNQPISEEIYIDDTLKTISYIPKSVKYFDYE 239
Query: 234 ----------------------NQPLYAGDLPNGITYLSLGCYNQQLGSDIIPSSVTHLT 271
N+ +Y GD+P+ +T L L N+ + + IP +VTHL+
Sbjct: 240 TSNDEFDFKILSENITYLNIIINKHIYPGDIPSSVTRLGL-LSNEDVRPEAIPDNVTHLS 298
Query: 272 LSKY---------------------DHSLKKGDIPSSVQFLKMNDFNSDIEIGAIPLSVK 310
Y D S+ IP+ V L N + +IP SV
Sbjct: 299 FDLYYFGNYSLNQLIHKNITHLNLGDLSVSCDRIPNGVTHLTYNP--KYLTKNSIPNSVT 356
Query: 311 KLTLHSFNQPIKPGAISFGVEKIRFLSSFNKPLIQGSFPSSVKTIHFSINFNQKIKPNDI 370
LT+++ + I V + F +++ + +G P +V+ + F NF+Q I+ I
Sbjct: 357 HLTINNKIKGSIDRCIPNSVVYLNFNGTYDNIIYKGDIPDNVRCLIFGNNFDQYIEEGAI 416
Query: 371 PESCIKIKMGYCFNHLPKLTSNIFSNNLKKIIVDRNYN 408
P S + + G +N K +N+ NN+K + +N
Sbjct: 417 PNSVVCLNFGKLYN---KPVNNVIPNNVKNLTFGYEFN 451
Score = 59.3 bits (142), Expect = 2e-07
Identities = 44/143 (30%), Positives = 74/143 (50%), Gaps = 4/143 (2%)
Query: 261 DIIPSSVTHLTLSKYDHSLKKGDIPSSVQFLKMND-FNSDIEIGAIPLSVKKLTLHSFNQ 319
D IP T + +Y + L+ G IP + L+ + FN ++ G IP +V LT+++ +
Sbjct: 87 DKIPLGTTCIKTGRYFNFLEMGVIPEGIISLEFCEYFNHTLKKGHIPETVTHLTINNGFR 146
Query: 320 PIKPGAISFGVEKIRFLSSFNKPLIQGSFPSSVKTIHFSINFNQKIKPNDIPESCIKIKM 379
++ G+I V + F +FNK + G P+SV + F FNQ IK N IP + + +
Sbjct: 147 HMEKGSIPNSVTHLIFGENFNKMIDVGVIPNSVVYLKFGRVFNQSIK-NVIPHNVKYLSL 205
Query: 380 GYCFNHLPKLTSNIFSNNLKKII 402
Y FN ++ I+ ++ K I
Sbjct: 206 MYSFNQ--PISEEIYIDDTLKTI 226
>gi|55819042|ref|YP_142516.1| unknown [Acanthomoeba polyphaga
mimivirus]
gb|AAV50436.1| unknown [Acanthomoeba polyphaga mimivirus]
Length = 521
Score = 65.1 bits (157), Expect = 4e-09
Identities = 68/242 (28%), Positives = 109/242 (44%), Gaps = 27/242 (11%)
Query: 189 VKFNKPLQLNSIPNSIEWLMLSD-FDQPLKPNLLPSSLIDLSL-FEYNQPLYAGDLPNGI 246
+ FNK P S+E+L L D F+ PL PN LP +L L L ++YN P+ LP G+
Sbjct: 177 IGFNKSTDF-MFPESLEYLDLGDKFNTPLTPNSLPKNLKHLYLGYKYNYPI-ENCLPYGL 234
Query: 247 TYLSLGCYNQQLGSDIIPSSVTHLTLSKYDHSLKKGDIPSSVQFLKMN-DFNSDIEIGAI 305
+L G Q + IP +VTHL + + KG +P ++ L+ FN + +G I
Sbjct: 235 KHLIFGHLFTQKIKNAIPETVTHLCMGGRFYRKVKGYLPKNLIHLEFGWGFNKPL-LGEI 293
Query: 306 PLSVKKLTLHSFNQPIKPGAISFGVEKIRFLSSFNKPLIQGSFPSSVKTIHFSINFNQKI 365
P T SF PI + + + S NK P ++KT+ ++++
Sbjct: 294 PNVEYLKTGSSFEYPICDDSNPSKITHLIVGSKINKS--DYVLPRNLKTLILDLDYDDPT 351
Query: 366 KPNDIPES--------CIKIKMG----YCFNHLPKLTSNIF-------SNNLKKIIVDRN 406
IP S I +G C++H+ LT N F +N+ +I+D+
Sbjct: 352 ILFKIPNSVTNLVIVNSTSIDLGSFDLNCYDHVTHLTLNTFVKGSLKYFHNVDTLILDQY 411
Query: 407 YN 408
++
Sbjct: 412 FS 413
Score = 53.1 bits (126), Expect = 1e-05
Identities = 59/206 (28%), Positives = 98/206 (46%), Gaps = 35/206 (16%)
Query: 138 SLTKLTLSLFNQPIGKDS-FNVLKNLKCLVL-ENFNHDINPNDLPSSLVELYL-VKFNKP 194
S +KLT F+ K + F ++L+ L L + FN + PN LP +L LYL K+N P
Sbjct: 166 SFSKLTRITFHIGFNKSTDFMFPESLEYLDLGDKFNTPLTPNSLPKNLKHLYLGYKYNYP 225
Query: 195 LQLNSIPNSIEWLMLSD-FDQPLK--------------------PNLLPSSLIDLSL-FE 232
++ N +P ++ L+ F Q +K LP +LI L +
Sbjct: 226 IE-NCLPYGLKHLIFGHLFTQKIKNAIPETVTHLCMGGRFYRKVKGYLPKNLIHLEFGWG 284
Query: 233 YNQPLYAGDLPNGITYLSLG-CYNQQLGSDIIPSSVTHLTLSKYDHSLKKGD--IPSSVQ 289
+N+PL G++PN + YL G + + D PS +THL + + K D +P +++
Sbjct: 285 FNKPL-LGEIPN-VEYLKTGSSFEYPICDDSNPSKITHLIVGS---KINKSDYVLPRNLK 339
Query: 290 FLKMN-DFNSDIEIGAIPLSVKKLTL 314
L ++ D++ + IP SV L +
Sbjct: 340 TLILDLDYDDPTILFKIPNSVTNLVI 365
>gi|55819050|ref|YP_142524.1| unknown [Acanthomoeba polyphaga
mimivirus]
gb|AAV50444.1| unknown [Acanthomoeba polyphaga mimivirus]
Length = 442
Score = 64.7 bits (156), Expect = 5e-09
Identities = 78/280 (27%), Positives = 132/280 (46%), Gaps = 35/280 (12%)
Query: 151 IGKDSFNVL--KNLKCLVLENFNHDINPNDLPSSLVELYLVKFNKPLQLNSIPNSIEWLM 208
I D+ N L KN++ L L I + LP ++ +L + + + IP+++E L+
Sbjct: 68 ITDDNINQLTMKNIRYLKLYTQRQFIK-HKLPINITKLEISRIFEQDIGPFIPDALEELI 126
Query: 209 LSDFDQPLKPNLLPSSLIDLSLFEYNQPLYAGDLPNGITYLSLGCYNQQLGSDIIPSSVT 268
L D+D+P++ LP +L L ++ + + +T L+LG Y+ LG +P+++
Sbjct: 127 LCDYDKPIR-KFLPPTLKTLKFIHTHKNVIKHQIAPNVTNLALGDYDGSLGK-WLPNNLK 184
Query: 269 HLTLSKYDHSLKKGDIPSSVQFLKMND-FNSDIEIGAIPLSVKKLTLHSFNQPIKPGAIS 327
+L + K+ +IP++V+ L + D FNS I + V KL +SFN+PI +
Sbjct: 185 YLDVGKFFRGKIGLNIPTTVETLILGDLFNSSINSLRNNIRVLKLG-NSFNKPI--DILP 241
Query: 328 FGVEKIRFLSSFN-------KPLIQGSF-------------PSSVKTIHFSINFNQKIKP 367
+E++ FN K LI+ F P+S++ FNQ I+
Sbjct: 242 ELLEELYIGRGFNSEITYLPKRLIRLEFDNECIFDHPINVLPNSLRIFKLGCFFNQSIE- 300
Query: 368 NDIPESCIKIKMGYCFNHLPKLTSNIFSNNL---KKIIVD 404
+P IK+K G FN + +FS L KK I D
Sbjct: 301 KCLPNGLIKLKFGDYFN--KPIQKTVFSGCLFKTKKFIPD 338
Score = 52.4 bits (124), Expect = 2e-05
Identities = 72/272 (26%), Positives = 128/272 (46%), Gaps = 31/272 (11%)
Query: 126 YDQIIKPMVLPESLTKLTLSLFNQPIGKDSFNVLKNLKCLVLEN--FNHDINPNDLPSSL 183
++Q I P + P++L +L L +++PI K LK LK + H I PN +
Sbjct: 110 FEQDIGPFI-PDALEELILCDYDKPIRKFLPPTLKTLKFIHTHKNVIKHQIAPN-----V 163
Query: 184 VELYLVKFNKPLQLNSIPNSIEWLMLSDFDQPLKPNLLPSSLIDLSLFE-YNQPLYAGDL 242
L L ++ L +PN++++L + F + +P+++ L L + +N + L
Sbjct: 164 TNLALGDYDGSLG-KWLPNNLKYLDVGKFFRGKIGLNIPTTVETLILGDLFNSSI--NSL 220
Query: 243 PNGITYLSLG-CYNQQLGSDIIPSSVTHLTLSKYDHSLKKGDIPSSVQFLKM-NDFNSDI 300
N I L LG +N+ + DI+P + L + + +S + +P + L+ N+ D
Sbjct: 221 RNNIRVLKLGNSFNKPI--DILPELLEELYIGRGFNS-EITYLPKRLIRLEFDNECIFDH 277
Query: 301 EIGAIPLSVKKLTLHS-FNQPIKPGAISFGVEKIRFLSSFNKPLIQGSF----------- 348
I +P S++ L FNQ I+ + G+ K++F FNKP+ + F
Sbjct: 278 PINVLPNSLRIFKLGCFFNQSIEK-CLPNGLIKLKFGDYFNKPIQKTVFSGCLFKTKKFI 336
Query: 349 PSSVKTIHFSINFNQKIKPNDIPESCIKIKMG 380
P SV+ + F + FNQ + +P KI +G
Sbjct: 337 PDSVRVLKFGMYFNQNVN-GGLPIGITKIVLG 367
Score = 44.7 bits (104), Expect = 0.005
Identities = 53/200 (26%), Positives = 87/200 (43%), Gaps = 28/200 (14%)
Query: 135 LPESLTKLTLSLFNQPIGKDSFNVLKNLKCLVLEN-FNHDINPNDLPSSLVELYLVK-FN 192
LP +L L + F + GK N+ ++ L+L + FN IN L +++ L L FN
Sbjct: 179 LPNNLKYLDVGKFFR--GKIGLNIPTTVETLILGDLFNSSIN--SLRNNIRVLKLGNSFN 234
Query: 193 KPLQLNSIPNSIEWLMLS-DFDQPLKPNLLPSSLIDLSLFE---YNQPLYAGDLPNGITY 248
KP+ + +P +E L + F+ + LP LI L ++ P+ LPN +
Sbjct: 235 KPIDI--LPELLEELYIGRGFNSEI--TYLPKRLIRLEFDNECIFDHPINV--LPNSLRI 288
Query: 249 LSLGCYNQQLGSDIIPSSVTHLTLSKYDHS------------LKKGDIPSSVQFLKMNDF 296
LGC+ Q +P+ + L Y + K IP SV+ LK +
Sbjct: 289 FKLGCFFNQSIEKCLPNGLIKLKFGDYFNKPIQKTVFSGCLFKTKKFIPDSVRVLKFGMY 348
Query: 297 NSDIEIGAIPLSVKKLTLHS 316
+ G +P+ + K+ L S
Sbjct: 349 FNQNVNGGLPIGITKIVLGS 368
>gi|55819159|ref|YP_142635.1| unknown [Acanthomoeba polyphaga
mimivirus]
gb|AAV50553.1| unknown [Acanthomoeba polyphaga mimivirus]
Length = 292
Score = 62.8 bits (151), Expect = 2e-08
Identities = 67/254 (26%), Positives = 116/254 (45%), Gaps = 62/254 (24%)
Query: 134 VLPESLTKLTLSLFNQPIGKDSFNVLKNLKCLVL-ENFNHDINPNDLPSSLVELYL-VKF 191
++PE+ T L ++ FNQ IGK N+ KN+ L FN I+ D+PS++ L L F
Sbjct: 61 IIPENTTHLVVT-FNQSIGK--INIPKNVSRLTFCPQFNKSID--DIPSTITHLSLGAAF 115
Query: 192 NKPLQLNSIPNSIEWLMLS-DFDQPLKPNLLPSSLIDLSLFEYNQPLYAGDLPNGITYLS 250
N ++++IP S+ L L F + L ++P +T+L+
Sbjct: 116 NG--EVSNIPTSVTHLKLGVSFKRKLS-----------------------EIPLSVTHLT 150
Query: 251 LGCYNQQLGSDIIPSSVTHLTLSKYDHSLKKGDIPSSVQFLKMNDFNSDIEIGAIPLSVK 310
L Y+ ++ I PS++THL ++ + G +P+ V L++ +NS++E IP +
Sbjct: 151 LNSYDTEIHGPI-PSTITHLAFAEDFNQSINGLVPNFVGHLRIRQYNSNLE---IPNHIY 206
Query: 311 KLTLHSFNQPIKPGAISFGVEKIRFLSSFNKPLIQGSFPSSVKTIHFSINFNQKIKPNDI 370
L+L+S+ +NK Q P+ +K + I + +K I
Sbjct: 207 HLSLNSY--------------------EYNK---QNELPNYIKFL--DIRYIFPVKYKFI 241
Query: 371 PESCIKIKMGYCFN 384
PE+ + G FN
Sbjct: 242 PETVTHLSFGNWFN 255
>gi|55819503|ref|YP_142990.1| unknown [Acanthomoeba polyphaga
mimivirus]
gb|AAV50897.1| unknown [Acanthomoeba polyphaga mimivirus]
Length = 394
Score = 62.0 bits (149), Expect = 3e-08
Identities = 69/286 (24%), Positives = 131/286 (45%), Gaps = 46/286 (16%)
Query: 141 KLTLSLFNQPIGKDSFNVLKNLKCLVLENFNHDINPNDLPSSLVELYLVKFNKPLQLNSI 200
+L L F PI K ++ N D+ N+ L+ + NK +++ I
Sbjct: 68 ELELCKFKTPIPK------------IVTNLEFDVYFNE---PLINRRIKIRNKWVKIRKI 112
Query: 201 -PNSIEWLMLS-DFDQPLKPNLLPSSLIDLSLFEYNQPLYAGDLPNGITYLSLGCYNQQL 258
P+++++L + F++ ++ L + E+NQP+ +P +TYL Y Q
Sbjct: 113 IPSTVKYLDMGYSFNKSIRGALSYGLTTLIFGPEFNQPI-DNYIPQTVTYLEFSVYFDQP 171
Query: 259 GSDIIPSSVTHLTLSKYDHSLKKGDIPSSVQFLKMN-DFNSDIEIGAIPLSVKKLTL-HS 316
+P+ +THL + KG +P ++++L FN I+ A+P ++K L H
Sbjct: 172 VVGYLPTRLTHLIFGTDFNQPIKGALPDTLEYLYFGWAFNQPIDF-ALPPNLKCLKFGHC 230
Query: 317 FNQPIKPGAISFGVEKIRFLSSFNKPL--------------------IQGSFPSSVKTIH 356
F+QPIK G + G+EK+ F + +++P+ ++ P ++KT+
Sbjct: 231 FDQPIK-GFLPLGLEKLIFEAEYHQPMDLAIPESVEYLKLGNPGSNSLENCLPINLKTLV 289
Query: 357 FSINFNQKIKPNDIPE--SCIKIKMGYCFNHLPKLTSNIFSNNLKK 400
F NFN+ + + + KI+ F+ K++S I +N+ K
Sbjct: 290 FGENFNENLNTLSLDKFRELEKIEFDGFFDQ--KISSRITIDNVIK 333
>gi|4049775|gb|AAC97735.1| ORF MSV261 leucine rich repeat gene
family protein, similar to Amsacta moorei entomopoxvirus
Q3 ORF SW:P28854 [Melanoplus sanguinipes entomopoxvirus]
pir||T28423 ORF MSV261 leucine rich repeat gene family protein - Melanoplus
sanguinipes entomopoxvirus
ref|NP_048332.1| ORF MSV261 leucine rich repeat gene family protein, similar to
Amsacta moorei entomopoxvirus Q3 ORF SW:P28854
[Melanoplus sanguinipes entomopoxvirus]
Length = 624
Score = 59.3 bits (142), Expect = 2e-07
Identities = 76/290 (26%), Positives = 130/290 (44%), Gaps = 47/290 (16%)
Query: 135 LPESLTKLTLSLFNQPIGKDSF-NVLKNLKCLVLEN-----FNHDINPNDLPSSLVELYL 188
LPESL KL +S I D + L NL+ L + N F ++I+ N+LP SL++L +
Sbjct: 141 LPESLIKLNISKCY--IENDRYLKNLNNLQELNISNKLDLDFPNEIDINNLPKSLIKLNI 198
Query: 189 VKFNKPLQLNSIPNSIEWLMLS-------DFDQPLKPNLLPSSLIDLSLFEYNQPLYAGD 241
N + NS+ N I L DF + N L SLI L++ N + A
Sbjct: 199 SNCN-IINANSLKNLINLKELDISNKLYLDFSNEIDINNLTKSLIKLNISNCN-IINASS 256
Query: 242 LPNGITYLSLGCYNQ-QLGSDIIPSSVTHLTLSKYDHSLKKGDIPSSVQFLKMNDF--NS 298
L N I L N + +P ++ L +S ++K + ++ LK D N
Sbjct: 257 LKNLINLKELDISNNYNINISSLPKTLIKLNISSC--NIKNTNFIINLDNLKELDISRNF 314
Query: 299 DIEIGAIPLSVKKLTLHSFNQPIKPGAISFGVEKIRFLSSFNKPLIQGSFPSSVKTIHFS 358
+I I ++P S+ KL + + ++ F+ + + ++K + S
Sbjct: 315 NINISSLPKSLIKLNIRTCY-----------IKNTNFIINLD----------NLKELDIS 353
Query: 359 INFNQKIKPNDIPESCIKIKMGYCFNHLPKLTSNIFSNNLKKIIVDRNYN 408
NFN I + +P+S I + + C+ ++++ NLK++ + RNYN
Sbjct: 354 RNFN--INISSLPKSLITLNINSCYIKHTNFINDLY--NLKELDISRNYN 399
>gi|55819164|ref|YP_142640.1| unknown [Acanthomoeba polyphaga
mimivirus]
gb|AAV50558.1| unknown [Acanthomoeba polyphaga mimivirus]
Length = 298
Score = 44.7 bits (104), Expect = 0.005
Identities = 54/189 (28%), Positives = 91/189 (47%), Gaps = 22/189 (11%)
Query: 135 LPESLTKLTLSL-FNQPIGKDSFNVLKNLKCLVLENFNHDINPNDLPSSLVELYLVKFNK 193
+PE + + + FN+PI K N + +L ++ +FN I+ + LP L+EL L N
Sbjct: 111 IPEGIKYVVFGIHFNKPIKKILPNSIIHL--ILGFSFNQSIS-DILPCGLIELTL-GHNF 166
Query: 194 PLQLNSIPNSIEWLMLSDFDQPLKPNL---LPSSLIDLSLFEYNQPLYAGDLPNGITYLS 250
+N IPN+I L+ FD P + +P+++ L + Y + D+PN I +L
Sbjct: 167 RQSINDIPNTITKLI---FDSEFIPEIHGKIPTNINCLGIRGYFGKNHKKDIPNNIKHLI 223
Query: 251 LGCYNQQLGSDIIPSSV--------THLTLSKYDHSLKKGDIPSSVQFLKM-NDFNSDIE 301
+G ++I S+ TH+TL ++ +IP+ V L + FN I
Sbjct: 224 IGTDYHSKMCEVIEDSIDMIITENMTHITLG-WNFDDTTFNIPNGVTHLILYQKFNPTI- 281
Query: 302 IGAIPLSVK 310
I +P SV+
Sbjct: 282 IKCLPSSVE 290
>gi|51597601|ref|YP_071792.1| putative antigenic leucine-rich repeat
protein [Yersinia pseudotuberculosis IP 32953]
emb|CAH22539.1| Putative antigenic leucine-rich repeat protein [Yersinia
pseudotuberculosis IP 32953]
Length = 608
Score = 44.3 bits (103), Expect = 0.007
Identities = 46/150 (30%), Positives = 71/150 (46%), Gaps = 19/150 (12%)
Query: 132 PMVLPESLTKLTLS-------LFNQPIGKDSFNVLKNLKCLVLENFNHDINPNDLPSSLV 184
P + P SL+ L LS N P G D NV N + L+ + P+ LPSSL
Sbjct: 84 PEIWPTSLSSLDLSDNVLTQFPQNLPEGLDYLNVSSNRR---LQEW-----PDSLPSSLK 135
Query: 185 ELYLVKFNKPLQLNSIPNSIEWLMLSDFDQPLKPNLLPSSLIDLSLFEYNQPLYAGDLPN 244
+L + L S+P +++ L + P P+SL+ L L + + +LP
Sbjct: 136 DLCITSCGFTT-LGSLPPNLQDLRANHNQINTLPETWPASLLLLDLCQNALTQFPQNLPE 194
Query: 245 GITYLSLGCYNQQL--GSDIIPSSVTHLTL 272
G+ L+L YN+QL G+ +PSS+ L +
Sbjct: 195 GMEDLTLS-YNRQLQQGTSSLPSSLKFLDI 223
Score = 42.4 bits (98), Expect = 0.025
Identities = 52/211 (24%), Positives = 96/211 (44%), Gaps = 12/211 (5%)
Query: 200 IPNSIEWLMLSDFDQPLKPNLLPSSLIDLSLFEYNQPLYAGDLPNGITYLSLGCYNQ-QL 258
+ N+ E L L+ P + P+SL L L + + +LP G+ YL++ + Q
Sbjct: 66 LENNAERLELNRLGLTSLPEIWPTSLSSLDLSDNVLTQFPQNLPEGLDYLNVSSNRRLQE 125
Query: 259 GSDIIPSSVTHLTLSKYDHSLKKGDIPSSVQFLKMNDFNSDIEIGAIPLSVKKLTLHSFN 318
D +PSS+ L ++ + G +P ++Q L+ N + P S+ L L
Sbjct: 126 WPDSLPSSLKDLCITSCGFT-TLGSLPPNLQDLRANHNQINTLPETWPASLLLLDLCQNA 184
Query: 319 QPIKPGAISFGVEKIRFLSSFNKPLIQG--SFPSSVKTIHF-SINFNQKIKP-NDIPESC 374
P + G+E + S+N+ L QG S PSS+K + F + + +P +C
Sbjct: 185 LTQFPQNLPEGMEDLTL--SYNRQLQQGTSSLPSSLKFLDIVRCGFTELSEAITSLPITC 242
Query: 375 IKIKMGYCFNHLPKLTSNIFSNNLKKIIVDR 405
+I MG +++ N++++++DR
Sbjct: 243 -QINMG---QRGSSGYTHLIPENVRELLLDR 269
>gi|45478559|ref|NP_995386.1| putative targeted effector protein
YopM [Yersinia pestis biovar Medievalis str. 91001]
gb|AAS58577.1| putative targeted effector protein YopM [Yersinia pestis biovar
Medievalis str. 91001]
Length = 367
Score = 40.8 bits (94), Expect = 0.073
Identities = 58/231 (25%), Positives = 103/231 (44%), Gaps = 15/231 (6%)
Query: 178 DLPSSLVELYLVKFNKPLQLNSIPNSIEWLMLSDFDQPLKPNLLPSSLIDLSLFEYNQPL 237
+LP SL L LV N L+ +P +E+L +S+ P L SS + + + N
Sbjct: 108 ELPQSLKSL-LVDNNNLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLK 166
Query: 238 YAGDLPNGITYLSLGCYNQQLGSDIIPSSVTHLTLSKYDHSLKK--GDIPSSVQFLKMND 295
DLP + +++ G N QL ++ LT D++L K D+P S++ L + D
Sbjct: 167 KLPDLPPSLEFIAAG--NNQLEELPELQNLPFLTTIYADNNLLKTLPDLPPSLEALNVRD 224
Query: 296 FNSDIEIGAIPLSVKKLTLHSFNQPIKPGAISFGVEKIRFLSSFNKPLIQGSFPSSVKTI 355
N ++ +P S LT ++ I G +S N+ P S++ +
Sbjct: 225 -NYLTDLPELPQS---LTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEEL 280
Query: 356 HFSINFNQKIKPNDIPESCIKIKMGYCFNHLPKLTSNIFSNNLKKIIVDRN 406
+++ N+ I+ +P ++ FNHL ++ NLK++ V+ N
Sbjct: 281 --NVSNNKLIELPALPPRLERLIAS--FNHLAEVPE--LPQNLKQLHVEYN 325
>gi|16419306|gb|AAL19737.1| leucine-rich repeat protein [Salmonella
typhimurium LT2]
ref|NP_459778.1| leucine-rich repeat protein [Salmonella typhimurium LT2]
Length = 765
Score = 40.4 bits (93), Expect = 0.096
Identities = 39/164 (23%), Positives = 73/164 (43%), Gaps = 4/164 (2%)
Query: 132 PMVLPESLTKLTLSLFNQPIGKDSFNVLKNLKCLVLENFNHDINPNDLPSSLVELYLVKF 191
P +PE +T TL L N + N+ N+K L + P LP ++ E+ L
Sbjct: 194 PAYIPEQIT--TLILDNNELKSLPENLQGNIKTLYANSNQLTSIPATLPDTIQEMEL-SI 250
Query: 192 NKPLQL-NSIPNSIEWLMLSDFDQPLKPNLLPSSLIDLSLFEYNQPLYAGDLPNGITYLS 250
N+ +L +P++++ L L P LP L LS+++ + LP+GIT+L+
Sbjct: 251 NRITELPERLPSALQSLDLFHNKISCLPENLPEELRYLSVYDNSIRTLPAHLPSGITHLN 310
Query: 251 LGCYNQQLGSDIIPSSVTHLTLSKYDHSLKKGDIPSSVQFLKMN 294
+ + + +P + L + + +P +Q L ++
Sbjct: 311 VQSNSLTALPETLPPGLKTLEAGENALTSLPASLPPELQVLDVS 354
>gi|50948145|ref|XP_483600.1| putative NBS-LRR resistance protein RGH1
[Oryza sativa (japonica cultivar-group)]
dbj|BAD08985.1| putative NBS-LRR resistance protein RGH1 [Oryza sativa (japonica
cultivar-group)]
Length = 1048
Score = 40.0 bits (92), Expect = 0.13
Identities = 29/91 (31%), Positives = 47/91 (50%), Gaps = 3/91 (3%)
Query: 180 PSSLVELYLVKFNKPLQLNSIPNSIEWLMLSDFDQ--PLKPNLLP-SSLIDLSLFEYNQP 236
PS L +LY+ N L++ +P S+E L +++ L PNL + L DL+LF +
Sbjct: 910 PSGLEKLYIEFCNNLLEIPKLPASLETLRINECTSLVSLPPNLARLAKLRDLTLFSCSSL 969
Query: 237 LYAGDLPNGITYLSLGCYNQQLGSDIIPSSV 267
D+ +G+T L C Q G + +P S+
Sbjct: 970 RNLPDVMDGLTGLQELCVRQCPGVETLPQSL 1000
>gi|46226440|gb|EAK87440.1| hypothetical protein cgd4_3980
[Cryptosporidium parvum]
Length = 884
Score = 40.0 bits (92), Expect = 0.13
Identities = 51/216 (23%), Positives = 100/216 (45%), Gaps = 22/216 (10%)
Query: 141 KLTLSLFNQPIGKDSFNVLKNLKCLVLENFNHDINPN-------DLPSSLVELYLVKFNK 193
++ LFN+ I + +N++KN K L+ N + +I N D S++ ++ N
Sbjct: 496 EINKQLFNKLINDELYNIIKNYKELI--NIDFEICENLVRKVIKDFFQSIISNSILYINS 553
Query: 194 PLQLNSIPNS-IEWLMLSDFDQPL-KPNL-LPSSLIDLSLFEYNQPLYAGD-------LP 243
+ N+I NS + + + +FDQ + K NL L SL ++F+ N + +
Sbjct: 554 -VFFNNIKNSDLNFNSIENFDQLIEKMNLELEYSLNGNNIFDLNNQDWIVEKFSLVNYKQ 612
Query: 244 NGITYLSLGCYNQQLGSDIIPSSVTHLTLSKYDHSLKKGDIPSSVQFLKMNDFNSDIEIG 303
I +LS+ + L + +P+ +++ YD + S++FL + FNSD
Sbjct: 613 KAIYFLSIIILTRYLRDNALPACISYFYKCFYDDKSAIKNSIDSIEFLDL--FNSDKIKY 670
Query: 304 AIPLSVKKLTLHSFNQPIKPGAISFGVEKIRFLSSF 339
P ++K + + + ++ I + +I FL+ F
Sbjct: 671 ESPTNLKNNSFYEDDATMQIVRILYNRFEILFLNIF 706
>gi|55819290|ref|YP_142769.1| unknown [Acanthomoeba polyphaga
mimivirus]
gb|AAV50684.1| unknown [Acanthomoeba polyphaga mimivirus]
Length = 415
Score = 40.0 bits (92), Expect = 0.13
Identities = 29/104 (27%), Positives = 50/104 (47%), Gaps = 8/104 (7%)
Query: 200 IPNSIEWLMLSDFDQPLKPNLLPSSLIDLSLFE-YNQPLYAG-----DLPNGITYLSLGC 253
IP + L++ + N++P + L++ E Y + G ++P+ +TYL++
Sbjct: 85 IPIDAKHLIIGKLFKLSLENIIPRGITHLTIEEEYGSEINPGIINPEEIPDIVTYLNIKS 144
Query: 254 YNQQLGSDIIPSSVTHLTLSKYDHSLKKGDIPSSVQFLKMNDFN 297
N + IP SVTHL L K IP +V +L+ DF+
Sbjct: 145 RNIFIKKGAIPDSVTHLYFG--SDYLSKDIIPKNVVYLRFGDFS 186
>gi|21281267|gb|AAM44951.1| putative receptor protein kinase
[Arabidopsis thaliana]
gb|AAK59614.1| putative receptor protein kinase [Arabidopsis thaliana]
ref|NP_567961.1| leucine-rich repeat transmembrane protein kinase, putative
[Arabidopsis thaliana]
Length = 757
Score = 39.3 bits (90), Expect = 0.21
Identities = 48/192 (25%), Positives = 79/192 (41%), Gaps = 17/192 (8%)
Query: 144 LSLFNQPIGKDSFNVLKNLK------CLVLENFNHDINPNDLPSSLVELYLVKFNKPLQL 197
L F I D +VL+N CL ++ + P LV NK L
Sbjct: 34 LLTFKYSILTDPLSVLRNWNYDDATPCLWTGVTCTELGKPNTPDMFRVTSLVLPNKHLLG 93
Query: 198 NSIPN--SIEWLMLSDFDQPLKPNLLPSSLI---DLSLFEYNQPLYAGDLP---NGITYL 249
+ P+ SI +L + D LP S+ +L +GDLP N +T L
Sbjct: 94 SITPDLFSIPYLRILDLSSNFFNGSLPDSVFNATELQSISLGSNNLSGDLPKSVNSVTNL 153
Query: 250 SLGCYNQQLGSDIIPSSVT---HLTLSKYDHSLKKGDIPSSVQFLKMNDFNSDIEIGAIP 306
L + + IP +++ +LT+ + GDIPS + ++ D +S++ G++P
Sbjct: 154 QLLNLSANAFTGEIPLNISLLKNLTVVSLSKNTFSGDIPSGFEAAQILDLSSNLLNGSLP 213
Query: 307 LSVKKLTLHSFN 318
+ +LH N
Sbjct: 214 KDLGGKSLHYLN 225
>gi|7270372|emb|CAB80139.1| receptor protein kinase-like protein
[Arabidopsis thaliana]
emb|CAA17550.1| receptor protein kinase-like protein [Arabidopsis thaliana]
pir||T05414 protein kinase homolog F28A23.20 - Arabidopsis thaliana
Length = 980
Score = 39.3 bits (90), Expect = 0.21
Identities = 48/192 (25%), Positives = 79/192 (41%), Gaps = 17/192 (8%)
Query: 144 LSLFNQPIGKDSFNVLKNLK------CLVLENFNHDINPNDLPSSLVELYLVKFNKPLQL 197
L F I D +VL+N CL ++ + P LV NK L
Sbjct: 34 LLTFKYSILTDPLSVLRNWNYDDATPCLWTGVTCTELGKPNTPDMFRVTSLVLPNKHLLG 93
Query: 198 NSIPN--SIEWLMLSDFDQPLKPNLLPSSLI---DLSLFEYNQPLYAGDLP---NGITYL 249
+ P+ SI +L + D LP S+ +L +GDLP N +T L
Sbjct: 94 SITPDLFSIPYLRILDLSSNFFNGSLPDSVFNATELQSISLGSNNLSGDLPKSVNSVTNL 153
Query: 250 SLGCYNQQLGSDIIPSSVT---HLTLSKYDHSLKKGDIPSSVQFLKMNDFNSDIEIGAIP 306
L + + IP +++ +LT+ + GDIPS + ++ D +S++ G++P
Sbjct: 154 QLLNLSANAFTGEIPLNISLLKNLTVVSLSKNTFSGDIPSGFEAAQILDLSSNLLNGSLP 213
Query: 307 LSVKKLTLHSFN 318
+ +LH N
Sbjct: 214 KDLGGKSLHYLN 225
>gi|15553678|gb|AAL01986.1| I2C-5 [Lycopersicon pimpinellifolium]
Length = 1297
Score = 38.9 bits (89), Expect = 0.28
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 214 QPLKPNLLPSSLIDLSLFEYN--QPLYAGDLPNGITYLSL-GCYN-QQLGSDIIPSSVTH 269
Q L + LPSSL L+++ Q L LP+ +++L++ C N Q L +PSS++H
Sbjct: 1178 QSLAESALPSSLSHLNIYNCPNLQSLSESALPSSLSHLTIYNCPNLQSLSESALPSSLSH 1237
Query: 270 LTLSKYDH--SLKKGDIPSSVQFL 291
LT+ + SL + +PSS+ L
Sbjct: 1238 LTIYNCPNLQSLSESALPSSLSKL 1261
>gi|57111891|ref|XP_548863.1| PREDICTED: similar to Toll-like
receptor 7 precursor (UNQ248/PRO285) [Canis familiaris]
Length = 1053
Score = 38.5 bits (88), Expect = 0.36
Identities = 30/79 (37%), Positives = 39/79 (48%), Gaps = 16/79 (20%)
Query: 151 IGKDSFNVLKNLKCLVLENFNHDINPNDLPSSLVELYLVKFNKPLQLNSIPNSIEWLMLS 210
I KD+F LKNLK L L++ N P LPS+L ELYL N+I +
Sbjct: 198 IEKDAFLSLKNLKLLSLKDNNITYVPTTLPSTLTELYLYN-----------NAIAKIQED 246
Query: 211 DFDQPLKPNLLPSSLIDLS 229
DF+ NL ++DLS
Sbjct: 247 DFN-----NLNQLRILDLS 260
>gi|38505593|ref|NP_942214.1| hypothetical protein [Synechocystis
sp. PCC 6803]
dbj|BAD01828.1| slr5058 [Synechocystis sp. PCC 6803]
Length = 783
Score = 38.5 bits (88), Expect = 0.36
Identities = 53/233 (22%), Positives = 97/233 (40%), Gaps = 9/233 (3%)
Query: 134 VLPESLTKLTL-SLFNQPIGKDSFNVLKNLKCLVLENFNHDINPNDLPSSLVELYLVKFN 192
V ESL T+ + + I K F VL + C L ++ L V++ + F
Sbjct: 91 VTDESLKTTTIPDVPDLAIIKTKFKVLVDTWCSRLPSYVDSNQSLLLTEVYVDVQVFPFA 150
Query: 193 KPLQLNSIPNSIEWLMLSDF-DQPLKPNLLPSSLIDL--SLFEYNQPLYAGDLPNGIT-- 247
Q + NS+ L + F +Q L P + S+ ++N + G G T
Sbjct: 151 PDQQWLAQQNSLTGLRANTFSNQRLAPTSKREQSVSALESVLQHNHVMVLGKPGTGKTLF 210
Query: 248 --YLSLGCYNQQLGSDIIPSSVTHLTLSKYDHSLKKGDIPSSVQFLKMNDFNSDIEIGAI 305
YL+L CY Q G D++P V+ + ++ + + D+ S ++ + S+ E+ +
Sbjct: 211 LKYLALQCYGQSAGFDLLPIFVSLRSFVEFIEAYENADLFSYLEHILRQAALSEAEVDYL 270
Query: 306 PLSVKKLTLHSFNQPIKPGAISFGVEKI-RFLSSFNKPLIQGSFPSSVKTIHF 357
K L L + + F +KI +F +++ I S S+ + +F
Sbjct: 271 FEQHKLLLLLNAFDEVSVEKADFVYQKIYQFTEKYHQNKIIISCRSASQNYYF 323
>gi|4049769|gb|AAC97729.1| ORF MSV253 leucine rich repeat gene
family protein, similar to Amsacta moorei entomopoxvirus
Q3 ORF SW:P28854 [Melanoplus sanguinipes entomopoxvirus]
pir||T28414 ORF MSV253 leucine rich repeat gene family protein - Melanoplus
sanguinipes entomopoxvirus
ref|NP_048324.1| ORF MSV253 leucine rich repeat gene family protein, similar to
Amsacta moorei entomopoxvirus Q3 ORF SW:P28854
[Melanoplus sanguinipes entomopoxvirus]
Length = 400
Score = 38.5 bits (88), Expect = 0.36
Identities = 21/58 (36%), Positives = 32/58 (54%), Gaps = 7/58 (12%)
Query: 351 SVKTIHFSINFNQKIKPNDIPESCIKIKMGYCF-------NHLPKLTSNIFSNNLKKI 401
++K ++ S+NFN I+ +PES I++ YCF N+LP L SNN + I
Sbjct: 82 NLKKLNISVNFNSDIEKCKLPESIIELICEYCFIKDYSFINNLPNLQILNISNNFEPI 139
>gi|18875360|ref|NP_573474.1| toll-like receptor 7 [Mus musculus]
gb|AAK62676.1| toll-like receptor 7 [Mus musculus]
gb|AAL73192.1| toll-like receptor 7 isoform [Mus musculus]
gb|AAL73191.1| toll-like receptor 7 [Mus musculus]
sp|P58681|TLR7_MOUSE Toll-like receptor 7 precursor
dbj|BAC29472.1| unnamed protein product [Mus musculus]
Length = 1050
Score = 38.1 bits (87), Expect = 0.48
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 151 IGKDSFNVLKNLKCLVLENFNHDINPNDLPSSLVELYLV-KFNKPLQLNSIPNSIEWLML 209
I KD+F V++NLK L L++ N P LP +L+ELYL K +Q N N E +L
Sbjct: 195 IEKDAFLVMRNLKVLSLKDNNVTAVPTTLPPNLLELYLYNNIIKKIQENDFNNLNELQVL 254
>gi|20088916|ref|NP_614991.1| dynein heavy chain [Methanosarcina
acetivorans C2A]
gb|AAM03471.1| dynein heavy chain [Methanosarcina acetivorans str. C2A]
Length = 159
Score = 38.1 bits (87), Expect = 0.48
Identities = 32/133 (24%), Positives = 59/133 (44%)
Query: 186 LYLVKFNKPLQLNSIPNSIEWLMLSDFDQPLKPNLLPSSLIDLSLFEYNQPLYAGDLPNG 245
++ + +K L + I + + L F+ PL +P I++ L+ N PLY+ ++P
Sbjct: 18 IFTIGIDKRLNMREISSIYINIPLYSFNIPLYSFNIPLYFINIPLYSINIPLYSFNIPLY 77
Query: 246 ITYLSLGCYNQQLGSDIIPSSVTHLTLSKYDHSLKKGDIPSSVQFLKMNDFNSDIEIGAI 305
+ L +N L S IP ++ L ++ L +IP + + N + I
Sbjct: 78 SINIPLYSFNIPLYSINIPLYFINIPLYSFNIPLYSINIPLYSFNIPLYSINIPLYFINI 137
Query: 306 PLSVKKLTLHSFN 318
PL + L+S N
Sbjct: 138 PLYFINIHLYSIN 150
Score = 37.7 bits (86), Expect = 0.62
Identities = 32/129 (24%), Positives = 62/129 (47%), Gaps = 2/129 (1%)
Query: 174 INPNDLPSSLVELYLVKFNKPLQLNSIPNSIEWLMLSDFDQPLKPNLLPSSLIDLSLFEY 233
+N ++ S + + L FN PL +IP + L + PL +P I++ L+ +
Sbjct: 27 LNMREISSIYINIPLYSFNIPLYSFNIPLYFINIPLYSINIPLYSFNIPLYSINIPLYSF 86
Query: 234 NQPLYAGDLPNGITYLSLGCYNQQLGSDIIPSSVTHLTLSKYDHSLKKGDIPSSVQFLKM 293
N PLY+ ++P + L +N L S IP ++ L + L +IP + F+ +
Sbjct: 87 NIPLYSINIPLYFINIPLYSFNIPLYSINIPLYSFNIPLYSINIPLYFINIP--LYFINI 144
Query: 294 NDFNSDIEI 302
+ ++ +I +
Sbjct: 145 HLYSINIHL 153
>gi|4049760|gb|AAC97720.1| ORF MSV241 leucine rich repeat gene
family protein, similar to Amsacta moorei entomopoxvirus
Q3 ORF SW:P28854 [Melanoplus sanguinipes entomopoxvirus]
pir||T28402 ORF MSV241 leucine rich repeat gene family protein - Melanoplus
sanguinipes entomopoxvirus
ref|NP_048312.1| ORF MSV241 leucine rich repeat gene family protein, similar to
Amsacta moorei entomopoxvirus Q3 ORF SW:P28854
[Melanoplus sanguinipes entomopoxvirus]
Length = 387
Score = 38.1 bits (87), Expect = 0.48
Identities = 76/293 (25%), Positives = 119/293 (39%), Gaps = 55/293 (18%)
Query: 135 LPESLTKLTLSLFNQPIGKDSFNVLKNLKCL-VLENFNHDINPNDLPSSLVELYLVKFNK 193
+P SL +L S N D L NLK L V N +IN ++PSSL++L+ +KFN
Sbjct: 95 IPSSLIELYCSNCNIT-NFDFLKKLINLKILDVSYNLLSNINKCEIPSSLIKLF-IKFNN 152
Query: 194 PLQLNSIP--NSIEWLMLSD-FDQPLKPNLLPSSLIDLSL-------FEYNQPLYAGDLP 243
+ ++++ L +SD +D + LPSS+I L F + + LY
Sbjct: 153 QDNYKFLEKLHNLQILDISDNWDIDVDIYKLPSSIIKLYCRDSNINDFSFIENLY----- 207
Query: 244 NGITYLSLGCYNQQLGSDIIPSSVTHLTLSKYDHSLKKGDIPSSVQFLKMNDF----NSD 299
+ L L Q SD S+T L L + +K ++ LK D NS+
Sbjct: 208 -NLKELYLTQNPQSFISDY-KLSITILKLICNECKIKDFKFLENLYNLKELDISENINSN 265
Query: 300 IEIGAIPLSVKKLTLHSFNQPIKPGAISFGVEKIRFLSSFNKPLIQGSFPSSVKTIHFSI 359
I + S+ K T + N ++ +FL + ++K ++ S
Sbjct: 266 ISECKLSNSILKFTCYKCN-----------IKDFKFLENLY----------NLKELNISE 304
Query: 360 NFNQKIKPNDIPESCIKIKMGYC----FNHLPKLTSNIFSNNLKKIIVDRNYN 408
N N I +P S +K C F L +L NLK + + N N
Sbjct: 305 NINSNISECKLPNSILKFTCYKCNIKNFKFLERLC------NLKYLNISHNTN 351
>gi|51597602|ref|YP_071793.1| putative antigenic leucine-rich repeat
protein. [Yersinia pseudotuberculosis IP 32953]
emb|CAH22540.1| Putative antigenic leucine-rich repeat protein. [Yersinia
pseudotuberculosis IP 32953]
Length = 625
Score = 37.7 bits (86), Expect = 0.62
Identities = 30/116 (25%), Positives = 54/116 (45%), Gaps = 1/116 (0%)
Query: 176 PNDLPSSLVELYLVKFNKPLQLNSIPNSIEWLMLSDFDQPLKPNLLPSSLIDLSLFEYNQ 235
P+ LP L+ LY+ ++P S+ L + D PN PS+L+ L++ + +
Sbjct: 124 PDTLPEHLLSLYVASNKLERLPENLPESLYRLNVCDNPSLQFPNNWPSNLMYLNIADC-E 182
Query: 236 PLYAGDLPNGITYLSLGCYNQQLGSDIIPSSVTHLTLSKYDHSLKKGDIPSSVQFL 291
LPN +T LS + D +P S+ L+++ + +P+S+ FL
Sbjct: 183 LTELPTLPNTLTELSADFNQLRTLPDTLPISLLRLSVTSNQLTQLPETLPASLSFL 238
>gi|34879918|ref|XP_228909.2| similar to toll-like receptor 7
[Rattus norvegicus]
Length = 1036
Score = 37.4 bits (85), Expect = 0.81
Identities = 20/38 (52%), Positives = 26/38 (67%)
Query: 151 IGKDSFNVLKNLKCLVLENFNHDINPNDLPSSLVELYL 188
I KD+F V+KNLK L L++ N P LP +L+ELYL
Sbjct: 181 IEKDAFLVMKNLKVLSLKDNNVTAVPTILPPNLLELYL 218
>gi|46437283|gb|EAK96632.1| hypothetical protein CaO19.9498 [Candida
albicans SC5314]
Length = 789
Score = 37.4 bits (85), Expect = 0.81
Identities = 46/196 (23%), Positives = 84/196 (42%), Gaps = 39/196 (19%)
Query: 179 LPSSLVELYLVKFNKPLQLNSIPNSIEWLMLSDFDQPLKPNLLPSSLIDLSLFEYNQPLY 238
+PS + EL + +LN + ++I+ L ++ FD LL S+ +L L E+ P
Sbjct: 139 IPSHITELSIFGD----KLNLVHSNIQTLAINQFDLRYM-ELLTESIKELKLLEFKLP-- 191
Query: 239 AGDLPNGITYLSLGCYNQQLGSDIIPSSVTHLTLSKYDHSLKKGDIPSSVQFLKMNDFNS 298
P+ S P ++THLT+++ HSL ++ S+ FLK ++
Sbjct: 192 -SSFPSS--------------SVKFPINLTHLTITEGQHSLSSINL-QSLLFLKSLNYKG 235
Query: 299 DIEIGA----------IPLSVKKLTLHSFN----QPIKPGAISFGVEKIRFLSSFNKPLI 344
++++ +P S++++ L N Q I +E I F F
Sbjct: 236 NLKLNTPQMTSMQDLQLPESIERVCLKCLNLVSLQSISNLKCLTHLEIIDFPKLFT--FF 293
Query: 345 QGSFPSSVKTIHFSIN 360
FPS +KT+ + +
Sbjct: 294 DTKFPSGLKTLIYKFD 309
>gi|16975343|pdb|1JL5|A Chain A, Novel Molecular Architecture Of
Yopm-A Leucine-Rich Effector Protein From Yersinia
Pestis
pdb|1G9U|A Chain A, Crystal Structure Of Yopm-Leucine Rich Effector Protein
From Yersinia Pestis
Length = 454
Score = 37.4 bits (85), Expect = 0.81
Identities = 49/164 (29%), Positives = 82/164 (49%), Gaps = 18/164 (10%)
Query: 135 LPESLTKLTLSLFNQPIGKDSFNVLKNL--KCLVLENFNHDINPN-DLPSSLVELYLVKF 191
LP+SLT L +S ++ F+ L L L +++I DLP SL EL V
Sbjct: 275 LPQSLTFLDVS-------ENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELN-VSN 326
Query: 192 NKPLQLNSIPNSIEWLMLSDFDQPLKPNLLPSSLIDLSLFEYNQPLYAGDLPNGITYLSL 251
NK ++L ++P +E L+ S F+ + LP +L L + EYN D+P + L +
Sbjct: 327 NKLIELPALPPRLERLIAS-FNHLAEVPELPQNLKQLHV-EYNPLREFPDIPESVEDLRM 384
Query: 252 GCYNQQLGSDIIPSSVTHLTLSKYDHSLKK-GDIPSSVQFLKMN 294
+ ++ +P ++ L + + L++ DIP SV+ L+MN
Sbjct: 385 NSHLAEVPE--LPQNLKQLHVET--NPLREFPDIPESVEDLRMN 424
Database: /home/dicty1/resource/WorkingDBs//nr-clean
Posted date: Mar 10, 2005 12:10 PM
Number of letters in database: 788,375,511
Number of sequences in database: 2,329,665
Lambda K H
0.320 0.140 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 603,419,163
Number of Sequences: 2329665
Number of extensions: 25273970
Number of successful extensions: 55917
Number of sequences better than 1.0: 28
Number of HSP's better than 1.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 55657
Number of HSP's gapped (non-prelim): 81
length of query: 423
length of database: 788,375,511
effective HSP length: 130
effective length of query: 293
effective length of database: 485,519,061
effective search space: 142257084873
effective search space used: 142257084873
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 85 (37.4 bits)
BLASTP 2.2.1 [Jul-12-2001]